| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899504
Identifier: 159899504
GI number: 159899504
Start: 3769916
End: 3771298
Strand: Reverse
Name: 159899504
Synonym: Haur_2985
Alternate gene names: NA
Gene position: 3771298-3769916 (Counterclockwise)
Preceding gene: 159899505
Following gene: 159899503
Centisome position: 59.42
GC content: 51.77
Gene sequence:
>1383_bases ATGCTACTCAGATTAACAACCACCCATACACCTGCAACCGACTTGAGTTTTATTTTACATAAGCATCCTGATCGGGTGCA AACCTTCCCGCTCCCCTTTGGCTCGGCCCATATCTTCTACCCCGAAGCCAGCGCCGAGCGCTGTACCATCGCCCTATTGC TTGATGTCGATCCGGTGGCGTTGGTGCGCGGCAATCGTGGCAGCGAGGGCATGCTCAGCCAATATGTCAACGATCGCCCA TATGTGGCTTCGTCGTTGCTATGTGTTGCCATGGGTGATGTTTTTTCGAGCGCCATGGCAGGGATTTGTAAAAAACGCCC AGAGTTGGTCGATTTGGTGTTGCCGCTAACCGTCGAGTTGCCAGTTGTGGCAGTGCGGGCGAAGGCTGGTTTAAGCTTAA TTCAACGGTTGTTTGAGCCGTTGGGCTATCAGGTTAGCGCCGAGCCAATTGCCAATGATAATCCAGCAAATAGCTATCTT GCGCTTAAATTAACTGCCAATCTCACGGTTAAACAATTGCTCACGCACATATATGTGCTCATCCCTGTGTTAGATAATGC TAAACACTATTGGATTGGCAATGACGAGGTGAGCAAATTGTTACGCAAAGGCGATGGGTGGTTGGCGCAACATCCAGAAT GCGAGTTGATTACAACCCGTTATTTGCGCTATCAAAAAAGCCTTACCAGCGCTGCGCTTGAGCATTTGCTCCAAGCAGTT GCGCCTGAAACCACAACTCAAACCGAGCTAGATCAGGAGCAAGTGAGCGAACCAACTGAACGCCAAAGCCTGCATACTCA GCGCCATAATGTAATTGTACAGCGGTTGAAGGCCAGCGGAGCACAACGCATTCTCGATTTAGGCTGTGGTGAAGGCAAGC TCTTACGTGAATTGCTCAAAGAGAGCCAATTTAGTGCGGTCGTTGGCATGGATTTGAGCACCCGTGCGTTGGCAATTTTA CAGCAACGGATTGAACGCTTGCCCGAACGTCAACGCCAACGCCTGAGCTTGCTGCATGGCTCGTTGCTCTATCGCGATGC TCGCTTGAAAGGCTTCGATGCCGCCGCAATCGTCGAAGTTTTGGAGCACCTTGAGCTTGGCCATTTGGCGGCCTTTGAAC GAACTGTATTTGGTTTTGCCCGCCCGAAATTGGTGCTCGTAACCACGCCCAACCGTGAGTACAATCAATTGTTTCCAAGT TTGCCCGCCGACCAGCTGCGCCACCGCCATCATCGTTTTGAATGGACGCGGGCTGAATTTGCAGTTTGGGCCGAACGAGT TGCGGCAAGCTACAACTATCGCGTCAGCATCGAGCCGTTGGGGCCCGAAGATCCCAACCATGGTGCGCCGTCGCAATTGG GGGTGTTTGAAGATGCAACCTAA
Upstream 100 bases:
>100_bases CGAATGATGAATCGCGGCTTCCCTCTTGCGATGGATTGCAAGAGGGTTTTTTGTGGTTAAATAGCCATCATGCCGAGATG GATTTAGAGGGAGTCTGCTG
Downstream 100 bases:
>100_bases ACTGCATTTGGCGCTCGGAACCCATGTGGTGCTGTTGCGCACGATCGATAATCAGGCCAAACATAGTGTGGCTCAAGTGG TTGCAACGCCCTGCGAACAT
Product: type 12 methyltransferase
Products: NA
Alternate protein names: Ubiquinone/Menaquinone Biosynthesis Methyltransferase UbiE; Methyltransferase; SAM-Dependent Methyltransferase; Methyltransferase Family Protein
Number of amino acids: Translated: 460; Mature: 460
Protein sequence:
>460_residues MLLRLTTTHTPATDLSFILHKHPDRVQTFPLPFGSAHIFYPEASAERCTIALLLDVDPVALVRGNRGSEGMLSQYVNDRP YVASSLLCVAMGDVFSSAMAGICKKRPELVDLVLPLTVELPVVAVRAKAGLSLIQRLFEPLGYQVSAEPIANDNPANSYL ALKLTANLTVKQLLTHIYVLIPVLDNAKHYWIGNDEVSKLLRKGDGWLAQHPECELITTRYLRYQKSLTSAALEHLLQAV APETTTQTELDQEQVSEPTERQSLHTQRHNVIVQRLKASGAQRILDLGCGEGKLLRELLKESQFSAVVGMDLSTRALAIL QQRIERLPERQRQRLSLLHGSLLYRDARLKGFDAAAIVEVLEHLELGHLAAFERTVFGFARPKLVLVTTPNREYNQLFPS LPADQLRHRHHRFEWTRAEFAVWAERVAASYNYRVSIEPLGPEDPNHGAPSQLGVFEDAT
Sequences:
>Translated_460_residues MLLRLTTTHTPATDLSFILHKHPDRVQTFPLPFGSAHIFYPEASAERCTIALLLDVDPVALVRGNRGSEGMLSQYVNDRP YVASSLLCVAMGDVFSSAMAGICKKRPELVDLVLPLTVELPVVAVRAKAGLSLIQRLFEPLGYQVSAEPIANDNPANSYL ALKLTANLTVKQLLTHIYVLIPVLDNAKHYWIGNDEVSKLLRKGDGWLAQHPECELITTRYLRYQKSLTSAALEHLLQAV APETTTQTELDQEQVSEPTERQSLHTQRHNVIVQRLKASGAQRILDLGCGEGKLLRELLKESQFSAVVGMDLSTRALAIL QQRIERLPERQRQRLSLLHGSLLYRDARLKGFDAAAIVEVLEHLELGHLAAFERTVFGFARPKLVLVTTPNREYNQLFPS LPADQLRHRHHRFEWTRAEFAVWAERVAASYNYRVSIEPLGPEDPNHGAPSQLGVFEDAT >Mature_460_residues MLLRLTTTHTPATDLSFILHKHPDRVQTFPLPFGSAHIFYPEASAERCTIALLLDVDPVALVRGNRGSEGMLSQYVNDRP YVASSLLCVAMGDVFSSAMAGICKKRPELVDLVLPLTVELPVVAVRAKAGLSLIQRLFEPLGYQVSAEPIANDNPANSYL ALKLTANLTVKQLLTHIYVLIPVLDNAKHYWIGNDEVSKLLRKGDGWLAQHPECELITTRYLRYQKSLTSAALEHLLQAV APETTTQTELDQEQVSEPTERQSLHTQRHNVIVQRLKASGAQRILDLGCGEGKLLRELLKESQFSAVVGMDLSTRALAIL QQRIERLPERQRQRLSLLHGSLLYRDARLKGFDAAAIVEVLEHLELGHLAAFERTVFGFARPKLVLVTTPNREYNQLFPS LPADQLRHRHHRFEWTRAEFAVWAERVAASYNYRVSIEPLGPEDPNHGAPSQLGVFEDAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI156564367, Length=203, Percent_Identity=36.4532019704434, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI156564365, Length=203, Percent_Identity=36.4532019704434, Blast_Score=134, Evalue=2e-31, Organism=Caenorhabditis elegans, GI25151690, Length=214, Percent_Identity=26.1682242990654, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI25151692, Length=214, Percent_Identity=26.1682242990654, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI19922074, Length=211, Percent_Identity=27.0142180094787, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51511; Mature: 51511
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRLTTTHTPATDLSFILHKHPDRVQTFPLPFGSAHIFYPEASAERCTIALLLDVDPVA CEEEEECCCCCCHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCCEEEEEEEECCCEE LVRGNRGSEGMLSQYVNDRPYVASSLLCVAMGDVFSSAMAGICKKRPELVDLVLPLTVEL EEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEECC PVVAVRAKAGLSLIQRLFEPLGYQVSAEPIANDNPANSYLALKLTANLTVKQLLTHIYVL CEEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH IPVLDNAKHYWIGNDEVSKLLRKGDGWLAQHPECELITTRYLRYQKSLTSAALEHLLQAV HHHHCCCCEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH APETTTQTELDQEQVSEPTERQSLHTQRHNVIVQRLKASGAQRILDLGCGEGKLLRELLK CCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ESQFSAVVGMDLSTRALAILQQRIERLPERQRQRLSLLHGSLLYRDARLKGFDAAAIVEV HCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LEHLELGHLAAFERTVFGFARPKLVLVTTPNREYNQLFPSLPADQLRHRHHRFEWTRAEF HHHHCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHCCHHHHHHH AVWAERVAASYNYRVSIEPLGPEDPNHGAPSQLGVFEDAT HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLRLTTTHTPATDLSFILHKHPDRVQTFPLPFGSAHIFYPEASAERCTIALLLDVDPVA CEEEEECCCCCCHHHHHHHHCCCCCCEECCCCCCCEEEECCCCCCCCEEEEEEEECCCEE LVRGNRGSEGMLSQYVNDRPYVASSLLCVAMGDVFSSAMAGICKKRPELVDLVLPLTVEL EEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEECC PVVAVRAKAGLSLIQRLFEPLGYQVSAEPIANDNPANSYLALKLTANLTVKQLLTHIYVL CEEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH IPVLDNAKHYWIGNDEVSKLLRKGDGWLAQHPECELITTRYLRYQKSLTSAALEHLLQAV HHHHCCCCEEECCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH APETTTQTELDQEQVSEPTERQSLHTQRHNVIVQRLKASGAQRILDLGCGEGKLLRELLK CCCCCCHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ESQFSAVVGMDLSTRALAILQQRIERLPERQRQRLSLLHGSLLYRDARLKGFDAAAIVEV HCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LEHLELGHLAAFERTVFGFARPKLVLVTTPNREYNQLFPSLPADQLRHRHHRFEWTRAEF HHHHCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHCCHHHHHHH AVWAERVAASYNYRVSIEPLGPEDPNHGAPSQLGVFEDAT HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA