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The map label for this gene is cyc1 [H]

Identifier: 159899506

GI number: 159899506

Start: 3772416

End: 3773432

Strand: Reverse

Name: cyc1 [H]

Synonym: Haur_2987

Alternate gene names: 159899506

Gene position: 3773432-3772416 (Counterclockwise)

Preceding gene: 159899507

Following gene: 159899505

Centisome position: 59.46

GC content: 47.1

Gene sequence:

>1017_bases
ATGCCAACCCGTACTACATTGCATCACTTAGCCACGCTTATGCCTCGTGATCTTCCGGTGCTCTATTGCCCATTTCCGGC
GGCGATTCATCCCGATGCGGTTGCGATTCAAGCCTCAACCCAAGCATGGGCTGATAGCTTTGGCTTGCTCGATGATTTGG
AGACGCGGCTCTCTTTTAATCAACGTGGCTATGGTACCTTGATGGCGCGAGCTTATCCTAATGCTTTAACTGAGCGCATG
CCAACCATTGCCGATTGGAGCACCAGCCTCTTTCTCTTAGATGATCAATTGGATCGCTTTGGCCGTGAGCATGATGCCGG
GGCCATGGCAACCTTGTTGCAACGCTTGATGAAGGTACTCAAAGGTTCGCCTGCCAAGCGCCACGATTTGCCAATTGTGC
AAGCAATGGGCGATGTAACCAGCCGACTTGTGCAAGGTTCGCCCGAAGCCTGGCAACACTACTTTTTTGATTCATTGCGC
AAATCGTTTGCAGCAGTGCAATGGGAAGCTAACAACCGTGCTCAGGGCTATATTCCAACTCAAAAAACCTATGCAATGCA
ACGTTTATATACCAGTGGTACTTATTTATGCTTGGCTTTGATTGAATTTGGCAATAACGATTTCCTGCATCCCCAAGTGC
GTTTGCATCCCATGGTGCGGCGTTTGTGTGAATATGTTAATCGGGTGGTGTTCTACTCAAATGATATTATTTCGTTGCGT
AAAGAATTATTAGCTGGCGATTGGCAAAATTTGGTGTATCTCGTGCATACGCAACATCAATTACCAATCGGCGAAGCATT
AAATTATGTCGCCCGTTTGCATAATGATACAATCAACCAATTCACTCGCGAACGCATTATGCTCGATAAATTGGCTCCTG
AGATTTGTTCACCAAGCTTGTATCGCTTTGTCGATGGTTTAGCTACCTGGATGCGAGCAAACCACGATTGGTCTACCATG
ACCTCTCGTTATCAGACATCTACCGAGGAATCCCATGGATCTCAGTATTGTGCGTGA

Upstream 100 bases:

>100_bases
CTTACCGAATTGTCGTATGCTGCATGAAACGTAGAGATGAATTATTTGCTGAAACAACCAATTTGCATTAGGTTTGTCAA
GCATCTAGGAGATTGACTCA

Downstream 100 bases:

>100_bases
ACGCCTGTTGCAGGTTGTTATTTCATTGACGGTCATCATTGGTGTATTTGGTTTAGCGTTTTTGGGCTTAGGAACTGTAT
TTTCGAATACAGTTCTTTTA

Product: terpene synthase metal-binding domain-containing protein

Products: NA

Alternate protein names: EIZS; Sesquiterpene cyclase; Sesquiterpene synthase [H]

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MPTRTTLHHLATLMPRDLPVLYCPFPAAIHPDAVAIQASTQAWADSFGLLDDLETRLSFNQRGYGTLMARAYPNALTERM
PTIADWSTSLFLLDDQLDRFGREHDAGAMATLLQRLMKVLKGSPAKRHDLPIVQAMGDVTSRLVQGSPEAWQHYFFDSLR
KSFAAVQWEANNRAQGYIPTQKTYAMQRLYTSGTYLCLALIEFGNNDFLHPQVRLHPMVRRLCEYVNRVVFYSNDIISLR
KELLAGDWQNLVYLVHTQHQLPIGEALNYVARLHNDTINQFTRERIMLDKLAPEICSPSLYRFVDGLATWMRANHDWSTM
TSRYQTSTEESHGSQYCA

Sequences:

>Translated_338_residues
MPTRTTLHHLATLMPRDLPVLYCPFPAAIHPDAVAIQASTQAWADSFGLLDDLETRLSFNQRGYGTLMARAYPNALTERM
PTIADWSTSLFLLDDQLDRFGREHDAGAMATLLQRLMKVLKGSPAKRHDLPIVQAMGDVTSRLVQGSPEAWQHYFFDSLR
KSFAAVQWEANNRAQGYIPTQKTYAMQRLYTSGTYLCLALIEFGNNDFLHPQVRLHPMVRRLCEYVNRVVFYSNDIISLR
KELLAGDWQNLVYLVHTQHQLPIGEALNYVARLHNDTINQFTRERIMLDKLAPEICSPSLYRFVDGLATWMRANHDWSTM
TSRYQTSTEESHGSQYCA
>Mature_337_residues
PTRTTLHHLATLMPRDLPVLYCPFPAAIHPDAVAIQASTQAWADSFGLLDDLETRLSFNQRGYGTLMARAYPNALTERMP
TIADWSTSLFLLDDQLDRFGREHDAGAMATLLQRLMKVLKGSPAKRHDLPIVQAMGDVTSRLVQGSPEAWQHYFFDSLRK
SFAAVQWEANNRAQGYIPTQKTYAMQRLYTSGTYLCLALIEFGNNDFLHPQVRLHPMVRRLCEYVNRVVFYSNDIISLRK
ELLAGDWQNLVYLVHTQHQLPIGEALNYVARLHNDTINQFTRERIMLDKLAPEICSPSLYRFVDGLATWMRANHDWSTMT
SRYQTSTEESHGSQYCA

Specific function: Catalyzes the cyclization of farnesyl diphosphate (FPP) to the sesquiterpene epi-isozizaene [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terpene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005630
- InterPro:   IPR008949 [H]

Pfam domain/function: PF03936 Terpene_synth_C [H]

EC number: =4.2.3.37 [H]

Molecular weight: Translated: 38718; Mature: 38586

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTRTTLHHLATLMPRDLPVLYCPFPAAIHPDAVAIQASTQAWADSFGLLDDLETRLSFN
CCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECHHHHHHHCCCHHHHHHHHCCC
QRGYGTLMARAYPNALTERMPTIADWSTSLFLLDDQLDRFGREHDAGAMATLLQRLMKVL
CCCCHHHHHHHHHHHHHHHCCCHHCCCCEEEEECHHHHHCCCCCCCCHHHHHHHHHHHHH
KGSPAKRHDLPIVQAMGDVTSRLVQGSPEAWQHYFFDSLRKSFAAVQWEANNRAQGYIPT
CCCCCCHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC
QKTYAMQRLYTSGTYLCLALIEFGNNDFLHPQVRLHPMVRRLCEYVNRVVFYSNDIISLR
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KELLAGDWQNLVYLVHTQHQLPIGEALNYVARLHNDTINQFTRERIMLDKLAPEICSPSL
HHHHHCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YRFVDGLATWMRANHDWSTMTSRYQTSTEESHGSQYCA
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHCCCCCCC
>Mature Secondary Structure 
PTRTTLHHLATLMPRDLPVLYCPFPAAIHPDAVAIQASTQAWADSFGLLDDLETRLSFN
CCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECHHHHHHHCCCHHHHHHHHCCC
QRGYGTLMARAYPNALTERMPTIADWSTSLFLLDDQLDRFGREHDAGAMATLLQRLMKVL
CCCCHHHHHHHHHHHHHHHCCCHHCCCCEEEEECHHHHHCCCCCCCCHHHHHHHHHHHHH
KGSPAKRHDLPIVQAMGDVTSRLVQGSPEAWQHYFFDSLRKSFAAVQWEANNRAQGYIPT
CCCCCCHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCC
QKTYAMQRLYTSGTYLCLALIEFGNNDFLHPQVRLHPMVRRLCEYVNRVVFYSNDIISLR
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
KELLAGDWQNLVYLVHTQHQLPIGEALNYVARLHNDTINQFTRERIMLDKLAPEICSPSL
HHHHHCCHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YRFVDGLATWMRANHDWSTMTSRYQTSTEESHGSQYCA
HHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]