| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is treS [H]
Identifier: 159899347
GI number: 159899347
Start: 3595193
End: 3596839
Strand: Reverse
Name: treS [H]
Synonym: Haur_2828
Alternate gene names: 159899347
Gene position: 3596839-3595193 (Counterclockwise)
Preceding gene: 159899348
Following gene: 159899346
Centisome position: 56.67
GC content: 44.87
Gene sequence:
>1647_bases ATGCAAAACGATTGGTATAAAGATGCAATCTTTTACGAATTGCATGTACGAGCTTTTCAGGATAGCAATGGCGATGGCAA TGGCGATTTCCGTGGCTTGATTTCGCGCTTGGATTATTTACAAAGTTTAGGCGTTGATTGTTTATGGTTATTACCTTTTT ATCCATCGCCTGGCAAAGATGATGGCTATGATGTTGCAGATTATTGTAATGTGCATCCTAGTTATGGCACGATGGAAGAT GTGGTTACATTTTTCGAGGCAGCCCATTCACGTGGCTTGCGGGTAATGATTGACCTTGTAGTTAATCACACCTCGGATCA GCACCCATGGTTTCAAGCGGCACGCCAACCAGACTCGCCCTATCGCGATTATTATGTTTGGAGTGATACAAATCAGCGTT ACCGCGATGCACGAATTATTTTCACCGATACCGAACGCTCGAATTGGGCTTGGGATGAAGTTTCCGAATCGTATTACTGG CATCGTTTCTTCAGTCATCAACCTGATTTGAATTATGAAAATCCCGCAGTCTTGGAAGAAATGTACAATATTATGCGTTT TTGGCTCGATCGCGGGGTTGATGGGTTCAGAGTTGATGCAGTGCCTTACTTAATCGAACGTGAGGGCACAAATTGCGAAA ATTTGCCTGAAACTCATGTAATTTTGCGTAAAATGCGTGAATTTGTTGATCAACACTATCCACATTGTGTACTGCTGGCT GAGGCCAACCAATGGCCCGATGATGTGCGCCATTATTTCGGCAACGATGATGAATTTCATATGGCCTTTAATTTTCCAGT GATGCCACGCATGTTTATGGCTGTACGCAAGGAAGATAGTACGCCAATTATCGATATTGTACGCCAAACGCCTAAAATTC CTGAAAACTGCCAATGGGCAACTTTTCTGCGCAATCACGATGAATTAACTCTCGAAATGGTCACTGATGAAGAACGTGAT TATATGTATCGTGAATATGCGGCTGATCCACGCATGAAAATCAATATTGGGATTCGACGACGTTTAGCACCCTTGATGGA TAATGCACGTCGTCGTATGGAATTGATGAATAGCATGCTGTTGAGTTTGCCAGGCTCGCCAATTATTTATTATGGCGATG AAATTGGCATGGGCGATAATATTTATCTTGGCGACCGCAACGGCGTGCGTACTCCGATGCAATGGAATGGCGACCGCAAT GCTGGTTTTTCGGCTGCCGATTTTGCCCGTTTGTATAGCCCTGTGATTATTGATCCGGTTTATGGCTATCAAGCGATCAA TGTTGAGGCGCAGGAGCGCGTGCAATCATCATTATTAAATTGGATGAAGCGCTTAATTCGGGTGCGCAAGCGTTATTCAG TCTTTGGGCGTGGCGATATTCAAATTCTCGAAACGCAAAATCGCAAAGTTTTAGCCTATTTGCGCAGTTACGCCGACCAA ACGGTGCTGATTGTCAATAATCTTTCGCGCTTTATCCAGCCAGTTGAGCTGGATTTGGCTGAGTTTGCGGGCATGCGCTT GGTGGAATTAATTGGTGAAACGCCATTTCCGGCAATTGCGACGACACCTTATTTTCTGTCGCTAGCGCCGCATGGCTTTA TCTGGTTCCGAATCGAAGGAGTGCGCCTTGCTCTCGACGACGCTTAA
Upstream 100 bases:
>100_bases TGGTGGGTCGATACATTTTTGCAAGCCGCCAATGTCAAGCGTTCGGGGGCAATTGAACAAGGATCAAGTTTATAAGTATA TATGCTACTAAAGGAGTTTT
Downstream 100 bases:
>100_bases ACAACGGTTGCAGCCAATTATCAAAGCGGAGCGCTTGGGATTAATCACCGATATTGATGGTACGATCAGTCGAATTGCAC CAACGCCTGATGGTGCAACC
Product: trehalose synthase
Products: NA
Alternate protein names: Maltose alpha-D-glucosyltransferase [H]
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MQNDWYKDAIFYELHVRAFQDSNGDGNGDFRGLISRLDYLQSLGVDCLWLLPFYPSPGKDDGYDVADYCNVHPSYGTMED VVTFFEAAHSRGLRVMIDLVVNHTSDQHPWFQAARQPDSPYRDYYVWSDTNQRYRDARIIFTDTERSNWAWDEVSESYYW HRFFSHQPDLNYENPAVLEEMYNIMRFWLDRGVDGFRVDAVPYLIEREGTNCENLPETHVILRKMREFVDQHYPHCVLLA EANQWPDDVRHYFGNDDEFHMAFNFPVMPRMFMAVRKEDSTPIIDIVRQTPKIPENCQWATFLRNHDELTLEMVTDEERD YMYREYAADPRMKINIGIRRRLAPLMDNARRRMELMNSMLLSLPGSPIIYYGDEIGMGDNIYLGDRNGVRTPMQWNGDRN AGFSAADFARLYSPVIIDPVYGYQAINVEAQERVQSSLLNWMKRLIRVRKRYSVFGRGDIQILETQNRKVLAYLRSYADQ TVLIVNNLSRFIQPVELDLAEFAGMRLVELIGETPFPAIATTPYFLSLAPHGFIWFRIEGVRLALDDA
Sequences:
>Translated_548_residues MQNDWYKDAIFYELHVRAFQDSNGDGNGDFRGLISRLDYLQSLGVDCLWLLPFYPSPGKDDGYDVADYCNVHPSYGTMED VVTFFEAAHSRGLRVMIDLVVNHTSDQHPWFQAARQPDSPYRDYYVWSDTNQRYRDARIIFTDTERSNWAWDEVSESYYW HRFFSHQPDLNYENPAVLEEMYNIMRFWLDRGVDGFRVDAVPYLIEREGTNCENLPETHVILRKMREFVDQHYPHCVLLA EANQWPDDVRHYFGNDDEFHMAFNFPVMPRMFMAVRKEDSTPIIDIVRQTPKIPENCQWATFLRNHDELTLEMVTDEERD YMYREYAADPRMKINIGIRRRLAPLMDNARRRMELMNSMLLSLPGSPIIYYGDEIGMGDNIYLGDRNGVRTPMQWNGDRN AGFSAADFARLYSPVIIDPVYGYQAINVEAQERVQSSLLNWMKRLIRVRKRYSVFGRGDIQILETQNRKVLAYLRSYADQ TVLIVNNLSRFIQPVELDLAEFAGMRLVELIGETPFPAIATTPYFLSLAPHGFIWFRIEGVRLALDDA >Mature_548_residues MQNDWYKDAIFYELHVRAFQDSNGDGNGDFRGLISRLDYLQSLGVDCLWLLPFYPSPGKDDGYDVADYCNVHPSYGTMED VVTFFEAAHSRGLRVMIDLVVNHTSDQHPWFQAARQPDSPYRDYYVWSDTNQRYRDARIIFTDTERSNWAWDEVSESYYW HRFFSHQPDLNYENPAVLEEMYNIMRFWLDRGVDGFRVDAVPYLIEREGTNCENLPETHVILRKMREFVDQHYPHCVLLA EANQWPDDVRHYFGNDDEFHMAFNFPVMPRMFMAVRKEDSTPIIDIVRQTPKIPENCQWATFLRNHDELTLEMVTDEERD YMYREYAADPRMKINIGIRRRLAPLMDNARRRMELMNSMLLSLPGSPIIYYGDEIGMGDNIYLGDRNGVRTPMQWNGDRN AGFSAADFARLYSPVIIDPVYGYQAINVEAQERVQSSLLNWMKRLIRVRKRYSVFGRGDIQILETQNRKVLAYLRSYADQ TVLIVNNLSRFIQPVELDLAEFAGMRLVELIGETPFPAIATTPYFLSLAPHGFIWFRIEGVRLALDDA
Specific function: Catalyzes the conversion of maltose into alpha,alpha- trehalose by transglucosylation [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=491, Percent_Identity=31.1608961303462, Blast_Score=231, Evalue=1e-60, Organism=Escherichia coli, GI1790687, Length=549, Percent_Identity=32.9690346083789, Blast_Score=254, Evalue=1e-68, Organism=Escherichia coli, GI87081873, Length=472, Percent_Identity=27.1186440677966, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1786604, Length=522, Percent_Identity=24.5210727969349, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1789995, Length=93, Percent_Identity=39.7849462365591, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25147709, Length=463, Percent_Identity=23.9740820734341, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI32565753, Length=489, Percent_Identity=23.1083844580777, Blast_Score=102, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6321731, Length=585, Percent_Identity=26.4957264957265, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6319776, Length=585, Percent_Identity=26.4957264957265, Blast_Score=197, Evalue=3e-51, Organism=Saccharomyces cerevisiae, GI6321726, Length=567, Percent_Identity=26.4550264550265, Blast_Score=197, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6322245, Length=564, Percent_Identity=27.4822695035461, Blast_Score=189, Evalue=8e-49, Organism=Saccharomyces cerevisiae, GI6322241, Length=202, Percent_Identity=40.5940594059406, Blast_Score=172, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6322021, Length=202, Percent_Identity=40.5940594059406, Blast_Score=172, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6324416, Length=202, Percent_Identity=40.5940594059406, Blast_Score=172, Evalue=2e-43, Organism=Drosophila melanogaster, GI45549022, Length=555, Percent_Identity=30.0900900900901, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI24583747, Length=537, Percent_Identity=34.0782122905028, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI24583749, Length=537, Percent_Identity=34.0782122905028, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI24583745, Length=555, Percent_Identity=30.8108108108108, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI24586599, Length=599, Percent_Identity=29.8831385642738, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI24586587, Length=521, Percent_Identity=30.7101727447217, Blast_Score=235, Evalue=5e-62, Organism=Drosophila melanogaster, GI24586593, Length=552, Percent_Identity=28.9855072463768, Blast_Score=235, Evalue=5e-62, Organism=Drosophila melanogaster, GI24586597, Length=565, Percent_Identity=29.9115044247788, Blast_Score=225, Evalue=5e-59, Organism=Drosophila melanogaster, GI221330053, Length=592, Percent_Identity=29.7297297297297, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24586591, Length=536, Percent_Identity=30.2238805970149, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24586589, Length=552, Percent_Identity=28.6231884057971, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI281360393, Length=497, Percent_Identity=27.1629778672032, Blast_Score=176, Evalue=3e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR012810 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.16 [H]
Molecular weight: Translated: 64324; Mature: 64324
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNDWYKDAIFYELHVRAFQDSNGDGNGDFRGLISRLDYLQSLGVDCLWLLPFYPSPGKD CCCCHHCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC DGYDVADYCNVHPSYGTMEDVVTFFEAAHSRGLRVMIDLVVNHTSDQHPWFQAARQPDSP CCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCCC YRDYYVWSDTNQRYRDARIIFTDTERSNWAWDEVSESYYWHRFFSHQPDLNYENPAVLEE CCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH MYNIMRFWLDRGVDGFRVDAVPYLIEREGTNCENLPETHVILRKMREFVDQHYPHCVLLA HHHHHHHHHHCCCCCEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE EANQWPDDVRHYFGNDDEFHMAFNFPVMPRMFMAVRKEDSTPIIDIVRQTPKIPENCQWA CCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHH TFLRNHDELTLEMVTDEERDYMYREYAADPRMKINIGIRRRLAPLMDNARRRMELMNSML HHHCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH LSLPGSPIIYYGDEIGMGDNIYLGDRNGVRTPMQWNGDRNAGFSAADFARLYSPVIIDPV HHCCCCCEEEECCCCCCCCEEEECCCCCCCCCCEECCCCCCCCCHHHHHHHHCCEEEECC YGYQAINVEAQERVQSSLLNWMKRLIRVRKRYSVFGRGDIQILETQNRKVLAYLRSYADQ CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC TVLIVNNLSRFIQPVELDLAEFAGMRLVELIGETPFPAIATTPYFLSLAPHGFIWFRIEG EEEEEHHHHHHHCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEEC VRLALDDA EEEEECCC >Mature Secondary Structure MQNDWYKDAIFYELHVRAFQDSNGDGNGDFRGLISRLDYLQSLGVDCLWLLPFYPSPGKD CCCCHHCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC DGYDVADYCNVHPSYGTMEDVVTFFEAAHSRGLRVMIDLVVNHTSDQHPWFQAARQPDSP CCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCCCCC YRDYYVWSDTNQRYRDARIIFTDTERSNWAWDEVSESYYWHRFFSHQPDLNYENPAVLEE CCCEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH MYNIMRFWLDRGVDGFRVDAVPYLIEREGTNCENLPETHVILRKMREFVDQHYPHCVLLA HHHHHHHHHHCCCCCEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE EANQWPDDVRHYFGNDDEFHMAFNFPVMPRMFMAVRKEDSTPIIDIVRQTPKIPENCQWA CCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHH TFLRNHDELTLEMVTDEERDYMYREYAADPRMKINIGIRRRLAPLMDNARRRMELMNSML HHHCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH LSLPGSPIIYYGDEIGMGDNIYLGDRNGVRTPMQWNGDRNAGFSAADFARLYSPVIIDPV HHCCCCCEEEECCCCCCCCEEEECCCCCCCCCCEECCCCCCCCCHHHHHHHHCCEEEECC YGYQAINVEAQERVQSSLLNWMKRLIRVRKRYSVFGRGDIQILETQNRKVLAYLRSYADQ CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCC TVLIVNNLSRFIQPVELDLAEFAGMRLVELIGETPFPAIATTPYFLSLAPHGFIWFRIEG EEEEEHHHHHHHCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEEC VRLALDDA EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8645698 [H]