| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is purH [H]
Identifier: 159899265
GI number: 159899265
Start: 3500668
End: 3502188
Strand: Reverse
Name: purH [H]
Synonym: Haur_2746
Alternate gene names: 159899265
Gene position: 3502188-3500668 (Counterclockwise)
Preceding gene: 159899268
Following gene: 159899264
Centisome position: 55.18
GC content: 52.66
Gene sequence:
>1521_bases ATGCGAGCTATTGTCAGTGTTTCAGACAAATCGGGGTTGGCGGATTTTGCTCAGGGCTTGAGCGATTTGGGCATTGAATT ATTTTCAACTGGCGGTACCAAAGCCGCGTTGGTTGGGGCTGGTGTGCCAGTCCGCAGTGTCAGCGATTTGACGGGCTTTC CTGAAATTTTGGAAGGTCGGGTCAAAACCTTGCATCCTGGTGTGCATGCTGGCATTTTGGCCCGCCGTGATAAGCCAGCC CATCTGGCCCAATTGGCTGAGCACCACATCGGCCAGATCGATTTGGTAGTTGTCAATTTGTATCCGTTTGCTCAAACCAT CGCCAAACCTGATGTTACTTTAGAAGAAGCAGTTGAACAGATTGATATTGGTGGCCCAACGATGGTGCGAGCTTCGGCCA AAAATCATGCCCATGTCTTGATTGTGATCGATCCTGCTGATTATCCACGGGTTTTGGAAGCCTTGCGGACTGAGCAAATT ACGCCTGAATTGCGCCGCCAACTTGCTGCCAAAGCCTTTGCCCATACCGCAGCCTACGATAGCGCGATTGCCGCCTACTT AACCGACGAAACGTTCCCGCAGCAATTGCCCTTGGCCTGGGAATTAGCCCAATCGCTGCGTTATGGCGAGAATCCGCATC AAGCAGCGGCGTTTTATCGCGCTCCCAATGCTGCCGCCAACACCTTGGCAAAAGCAGTGCAACATCAAGGCAAAGAGCTT TCCTACAACAACTTGCTTGATGCTGATGCTACCTTGCAAGTAATTCAAAATTTTGATCAGCCAACCGTGGCGATTATCAA GCACACTAATCCTTGTGGCCTGGCTTCGGCTGAGGATTTGGTGGCGGCCCACAAAGCGGCGCGGGCGGGTGATCCGCTTT CGGCGTTTGGTGGCATCGTCGGGGTCAATCGCCCCGTCGATCGGGCTTTAGCCAATGTGCTGAAAAAATATTTTTACGAA GTGATTATTGCCCCATCCTTTAGCCCTGAAGCCTTGACAATTTTGGCCGAAAAGCCCAATTTACGCTTGTTGAGCGTCGA TACCAGCCGCTCAAGCAGCAACGATTGGGAATATCGCAGTATTGGCGGCGGCATTTTGGCCCAACATGTTGATCGCGTTG GTAATGATCGCTGGGATGCTTGGCAGGTTGTTACTGAAACTGTGCCCAGCGATGAGCAACTGGCAGCCTTGCAATTTGCT TGGAAAGCTTGTGCCAGCGTGAAATCGAATGCGATTGTCTTGGTGCAAGGCGAGGAATTGGTGGGGATGGGCGCTGGTCA GCCTTCACGGGTTGATTCGGTATTGACGGCGATTCGCAAGGCGGGCGAACGGGCCAAGGGTAGCGTGCTAGCTTCCGATG CCTTCTTCCCCAAAGCCGATGGAATTCAGGCCGCGATTGAAGCTGGCGTGAGCGCAATTGTTCAGCCTGGTGGCTCGCAA GGTGATGATGAAGTGATTGCTGCTGCTAACGCCGCAGGCATCGCGATGATCTTCACTGCTACTCGCCACTTCAAACACTA A
Upstream 100 bases:
>100_bases CAAACGTGGGCAACCACGGGGGAGCCGATTTGCGCAGATGCCGCTCGCCTGGGCAAAGGGCTGTTTAGCCCTATGTACAC CGCGAATGGAGCTTTGGTTC
Downstream 100 bases:
>100_bases ATCTATCTACTGGCCAGCGTTGGTCGATGGTCGGCCACGCTGGTCGCTTTTTAGTCGAAAGAATGTGATGTTATGGTCGA ATTAACCTACGATAGCCAAG
Product: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MRAIVSVSDKSGLADFAQGLSDLGIELFSTGGTKAALVGAGVPVRSVSDLTGFPEILEGRVKTLHPGVHAGILARRDKPA HLAQLAEHHIGQIDLVVVNLYPFAQTIAKPDVTLEEAVEQIDIGGPTMVRASAKNHAHVLIVIDPADYPRVLEALRTEQI TPELRRQLAAKAFAHTAAYDSAIAAYLTDETFPQQLPLAWELAQSLRYGENPHQAAAFYRAPNAAANTLAKAVQHQGKEL SYNNLLDADATLQVIQNFDQPTVAIIKHTNPCGLASAEDLVAAHKAARAGDPLSAFGGIVGVNRPVDRALANVLKKYFYE VIIAPSFSPEALTILAEKPNLRLLSVDTSRSSSNDWEYRSIGGGILAQHVDRVGNDRWDAWQVVTETVPSDEQLAALQFA WKACASVKSNAIVLVQGEELVGMGAGQPSRVDSVLTAIRKAGERAKGSVLASDAFFPKADGIQAAIEAGVSAIVQPGGSQ GDDEVIAAANAAGIAMIFTATRHFKH
Sequences:
>Translated_506_residues MRAIVSVSDKSGLADFAQGLSDLGIELFSTGGTKAALVGAGVPVRSVSDLTGFPEILEGRVKTLHPGVHAGILARRDKPA HLAQLAEHHIGQIDLVVVNLYPFAQTIAKPDVTLEEAVEQIDIGGPTMVRASAKNHAHVLIVIDPADYPRVLEALRTEQI TPELRRQLAAKAFAHTAAYDSAIAAYLTDETFPQQLPLAWELAQSLRYGENPHQAAAFYRAPNAAANTLAKAVQHQGKEL SYNNLLDADATLQVIQNFDQPTVAIIKHTNPCGLASAEDLVAAHKAARAGDPLSAFGGIVGVNRPVDRALANVLKKYFYE VIIAPSFSPEALTILAEKPNLRLLSVDTSRSSSNDWEYRSIGGGILAQHVDRVGNDRWDAWQVVTETVPSDEQLAALQFA WKACASVKSNAIVLVQGEELVGMGAGQPSRVDSVLTAIRKAGERAKGSVLASDAFFPKADGIQAAIEAGVSAIVQPGGSQ GDDEVIAAANAAGIAMIFTATRHFKH >Mature_506_residues MRAIVSVSDKSGLADFAQGLSDLGIELFSTGGTKAALVGAGVPVRSVSDLTGFPEILEGRVKTLHPGVHAGILARRDKPA HLAQLAEHHIGQIDLVVVNLYPFAQTIAKPDVTLEEAVEQIDIGGPTMVRASAKNHAHVLIVIDPADYPRVLEALRTEQI TPELRRQLAAKAFAHTAAYDSAIAAYLTDETFPQQLPLAWELAQSLRYGENPHQAAAFYRAPNAAANTLAKAVQHQGKEL SYNNLLDADATLQVIQNFDQPTVAIIKHTNPCGLASAEDLVAAHKAARAGDPLSAFGGIVGVNRPVDRALANVLKKYFYE VIIAPSFSPEALTILAEKPNLRLLSVDTSRSSSNDWEYRSIGGGILAQHVDRVGNDRWDAWQVVTETVPSDEQLAALQFA WKACASVKSNAIVLVQGEELVGMGAGQPSRVDSVLTAIRKAGERAKGSVLASDAFFPKADGIQAAIEAGVSAIVQPGGSQ GDDEVIAAANAAGIAMIFTATRHFKH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=477, Percent_Identity=38.9937106918239, Blast_Score=268, Evalue=1e-71, Organism=Escherichia coli, GI1790439, Length=524, Percent_Identity=48.8549618320611, Blast_Score=460, Evalue=1e-131, Organism=Caenorhabditis elegans, GI71985564, Length=474, Percent_Identity=34.5991561181435, Blast_Score=234, Evalue=9e-62, Organism=Caenorhabditis elegans, GI71985574, Length=306, Percent_Identity=26.1437908496732, Blast_Score=70, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6323056, Length=480, Percent_Identity=36.6666666666667, Blast_Score=250, Evalue=4e-67, Organism=Saccharomyces cerevisiae, GI6323768, Length=470, Percent_Identity=36.5957446808511, Blast_Score=247, Evalue=3e-66, Organism=Drosophila melanogaster, GI24649832, Length=474, Percent_Identity=38.6075949367089, Blast_Score=255, Evalue=5e-68,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 53757; Mature: 53757
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAIVSVSDKSGLADFAQGLSDLGIELFSTGGTKAALVGAGVPVRSVSDLTGFPEILEGR CCEEEEECCCCCHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCHHHHCCCHHHHHCH VKTLHPGVHAGILARRDKPAHLAQLAEHHIGQIDLVVVNLYPFAQTIAKPDVTLEEAVEQ HHHCCCCHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEEHHHHHHHCCCCCCHHHHHHH IDIGGPTMVRASAKNHAHVLIVIDPADYPRVLEALRTEQITPELRRQLAAKAFAHTAAYD HCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH SAIAAYLTDETFPQQLPLAWELAQSLRYGENPHQAAAFYRAPNAAANTLAKAVQHQGKEL HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCC SYNNLLDADATLQVIQNFDQPTVAIIKHTNPCGLASAEDLVAAHKAARAGDPLSAFGGIV CCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCC GVNRPVDRALANVLKKYFYEVIIAPSFSPEALTILAEKPNLRLLSVDTSRSSSNDWEYRS CCCCCHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHH IGGGILAQHVDRVGNDRWDAWQVVTETVPSDEQLAALQFAWKACASVKSNAIVLVQGEEL CCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCE VGMGAGQPSRVDSVLTAIRKAGERAKGSVLASDAFFPKADGIQAAIEAGVSAIVQPGGSQ EECCCCCCHHHHHHHHHHHHHCCHHCCCEEECCCCCCCCCCHHHHHHHCHHHEECCCCCC GDDEVIAAANAAGIAMIFTATRHFKH CCCCEEEECCCCCEEEEEEHHHHCCC >Mature Secondary Structure MRAIVSVSDKSGLADFAQGLSDLGIELFSTGGTKAALVGAGVPVRSVSDLTGFPEILEGR CCEEEEECCCCCHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCHHHHCCCHHHHHCH VKTLHPGVHAGILARRDKPAHLAQLAEHHIGQIDLVVVNLYPFAQTIAKPDVTLEEAVEQ HHHCCCCHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEEHHHHHHHCCCCCCHHHHHHH IDIGGPTMVRASAKNHAHVLIVIDPADYPRVLEALRTEQITPELRRQLAAKAFAHTAAYD HCCCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH SAIAAYLTDETFPQQLPLAWELAQSLRYGENPHQAAAFYRAPNAAANTLAKAVQHQGKEL HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCC SYNNLLDADATLQVIQNFDQPTVAIIKHTNPCGLASAEDLVAAHKAARAGDPLSAFGGIV CCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCC GVNRPVDRALANVLKKYFYEVIIAPSFSPEALTILAEKPNLRLLSVDTSRSSSNDWEYRS CCCCCHHHHHHHHHHHHHHHEEECCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHH IGGGILAQHVDRVGNDRWDAWQVVTETVPSDEQLAALQFAWKACASVKSNAIVLVQGEEL CCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCE VGMGAGQPSRVDSVLTAIRKAGERAKGSVLASDAFFPKADGIQAAIEAGVSAIVQPGGSQ EECCCCCCHHHHHHHHHHHHHCCHHCCCEEECCCCCCCCCCHHHHHHHCHHHEECCCCCC GDDEVIAAANAAGIAMIFTATRHFKH CCCCEEEECCCCCEEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA