| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899268
Identifier: 159899268
GI number: 159899268
Start: 3505389
End: 3505835
Strand: Reverse
Name: 159899268
Synonym: Haur_2749
Alternate gene names: NA
Gene position: 3505835-3505389 (Counterclockwise)
Preceding gene: 159899277
Following gene: 159899265
Centisome position: 55.24
GC content: 44.74
Gene sequence:
>447_bases ATGCTGGCCAATGTGTGTCTGGTGGAGAGTACCCGTGTTTTGCAAATTATGGCAAAGACTCAGTTTCGCGGCGCTGAACA ATTACTGACGCAGTTCAATTTATCGACGACAATCGCGATTTGTAGTACGAGTTTTCAGCTTTTGCAATGGCTTGAATATC AACCACAGCAGTATGCCCGTTTGATTTTGGTTGATCAACGTTTGGCCGATGGGGTAAGCATCGATGAATTAATGCCGCAA ATTCGTTCTGAGCATTTTAAACATCGTGCCTTGGCCGATGATGCCAAAATTATTGGCTGGAGTCGTGACGACCAAGCTCA AGAGGTTTTCTATCGTGCAGGCCTGGATGGCTTTATCTCAAAAAATCGTCAATCGCACCAACTGATCCGTGATATTGTGA CCGTCTTTACCAATCAAGCTGAGCATCCATGGTTGCAGCTTAATTAA
Upstream 100 bases:
>100_bases TTATCGCCGATTACTACACTCAAAGGCCTAATTTGAGCCAATGAGCTATATCAATATTCTAGGTATAGAATATTTCTTGG CATGGAGCAAGGAGTCTGGC
Downstream 100 bases:
>100_bases TCAGGATGCGCCACCAGCAATCGCTAGTGGCGCATTGTATTTTAGTCCAGAACGGCAGCTTCAATCGGTGGCAGCGAGCT TTCATAACGGGCAAAGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MLANVCLVESTRVLQIMAKTQFRGAEQLLTQFNLSTTIAICSTSFQLLQWLEYQPQQYARLILVDQRLADGVSIDELMPQ IRSEHFKHRALADDAKIIGWSRDDQAQEVFYRAGLDGFISKNRQSHQLIRDIVTVFTNQAEHPWLQLN
Sequences:
>Translated_148_residues MLANVCLVESTRVLQIMAKTQFRGAEQLLTQFNLSTTIAICSTSFQLLQWLEYQPQQYARLILVDQRLADGVSIDELMPQ IRSEHFKHRALADDAKIIGWSRDDQAQEVFYRAGLDGFISKNRQSHQLIRDIVTVFTNQAEHPWLQLN >Mature_148_residues MLANVCLVESTRVLQIMAKTQFRGAEQLLTQFNLSTTIAICSTSFQLLQWLEYQPQQYARLILVDQRLADGVSIDELMPQ IRSEHFKHRALADDAKIIGWSRDDQAQEVFYRAGLDGFISKNRQSHQLIRDIVTVFTNQAEHPWLQLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17105; Mature: 17105
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLANVCLVESTRVLQIMAKTQFRGAEQLLTQFNLSTTIAICSTSFQLLQWLEYQPQQYAR CCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHH LILVDQRLADGVSIDELMPQIRSEHFKHRALADDAKIIGWSRDDQAQEVFYRAGLDGFIS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHCCHHHHH KNRQSHQLIRDIVTVFTNQAEHPWLQLN CCCHHHHHHHHHHHHHHCCCCCCEEECC >Mature Secondary Structure MLANVCLVESTRVLQIMAKTQFRGAEQLLTQFNLSTTIAICSTSFQLLQWLEYQPQQYAR CCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHH LILVDQRLADGVSIDELMPQIRSEHFKHRALADDAKIIGWSRDDQAQEVFYRAGLDGFIS HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHCCHHHHH KNRQSHQLIRDIVTVFTNQAEHPWLQLN CCCHHHHHHHHHHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA