| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899103
Identifier: 159899103
GI number: 159899103
Start: 3317588
End: 3318574
Strand: Direct
Name: 159899103
Synonym: Haur_2584
Alternate gene names: NA
Gene position: 3317588-3318574 (Clockwise)
Preceding gene: 159899102
Following gene: 159899104
Centisome position: 52.27
GC content: 49.65
Gene sequence:
>987_bases ATGGCTCAAGACACCATTCAGGCCAAGTACGATGAGTTGGATCAAGTTGCCAGCCGTTTTGGCAAAGCCGCTGACACCAC CACAGCAATTTTCAAATCGCTTGAAAGTATGGCCAATCGGCTTGAGGGTGGTGATTGGCAGGGCGATGCTCAAAAGGCAT TTAGTGCTGAATTTCGGGGCGAGGTTCAACCAGCCTTTAACCGCCTTCACACTTTTTTCCAACAAGCACAAAGCACAACC TTAGAGATCAAAAAAGTCTTCCAACAAGCTGAAGAAGAAGCGGCTGCCCTTTTTCGTGGCGATGTCTTTGGCGGTGGTGC TAATGGTAATGGTAGCGGCAATGGGACTGCTGGCAATGGCAATGGCAGTGGCAGTGGCAGTGGCAGTGGCAATACTGGCG ATGGTGGCACAGGTACAGGCGGCTCAGGCAGTGGCCCAACCTTCAAGGGTAAAGTTAAAGTTCACACCTATGATTACAAA ACCAAAACTGGTGAAACCAAGCCGCAACTCAAATTAGGCGTTAGCGGCGCACTCCTTGAAGACAAAGGCGATCTGATTAA GGTTGATGGGCCGATTCCTTACACCCTCAAAGGCAAATACCAAGTTGGTTATGGCGAAGCTGGGATCGGCTTAGGGGTCA ATGGCGATAAGAAATTTACGATTGGGCCATACGTCGAAGGAACTGTTGCCAAAGGTGAATTAACCAATGTTTATGGCGAC AAAAACTTTGGCTATACCGAAACCCTCGAAGGCAAAGCCCTCTCAGTTGAAGGTTTTGCTGGCCTCAAAGATGGCTCAGT TGGCGCAACCATCGGCGGCACGCTCGTCTCAGTTCAAGCCACCAAAGGCTTGAATGTTGCTGGGGTCAACGTTGGGGTTA CCGCCGAAGTTGGCCTCAAGGCCGAGCTTGGCTTTAGCATCGGTAAAGAAACCAAAATTAAATTGCCATTTGTCTCGTTT GGCTTCTCGTTTGGTGGAGCCAAATAA
Upstream 100 bases:
>100_bases CATGGTTTAACCTGAATAAGCCCATAGCATAATCATTGGCTAGTATCTCTAGCAATGATCACAATCTTCTGTTCTTTTTA TACCCGATGGAGTTTACCTC
Downstream 100 bases:
>100_bases CCTAGAGAAGGGGTTAACTCAATGGATGGACTTATTTTAGAGCGTAACGAGTTTTTAGTGTTACTCGAAGCAGCTCGTAC CAATAAAATCATTGGCTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MAQDTIQAKYDELDQVASRFGKAADTTTAIFKSLESMANRLEGGDWQGDAQKAFSAEFRGEVQPAFNRLHTFFQQAQSTT LEIKKVFQQAEEEAAALFRGDVFGGGANGNGSGNGTAGNGNGSGSGSGSGNTGDGGTGTGGSGSGPTFKGKVKVHTYDYK TKTGETKPQLKLGVSGALLEDKGDLIKVDGPIPYTLKGKYQVGYGEAGIGLGVNGDKKFTIGPYVEGTVAKGELTNVYGD KNFGYTETLEGKALSVEGFAGLKDGSVGATIGGTLVSVQATKGLNVAGVNVGVTAEVGLKAELGFSIGKETKIKLPFVSF GFSFGGAK
Sequences:
>Translated_328_residues MAQDTIQAKYDELDQVASRFGKAADTTTAIFKSLESMANRLEGGDWQGDAQKAFSAEFRGEVQPAFNRLHTFFQQAQSTT LEIKKVFQQAEEEAAALFRGDVFGGGANGNGSGNGTAGNGNGSGSGSGSGNTGDGGTGTGGSGSGPTFKGKVKVHTYDYK TKTGETKPQLKLGVSGALLEDKGDLIKVDGPIPYTLKGKYQVGYGEAGIGLGVNGDKKFTIGPYVEGTVAKGELTNVYGD KNFGYTETLEGKALSVEGFAGLKDGSVGATIGGTLVSVQATKGLNVAGVNVGVTAEVGLKAELGFSIGKETKIKLPFVSF GFSFGGAK >Mature_327_residues AQDTIQAKYDELDQVASRFGKAADTTTAIFKSLESMANRLEGGDWQGDAQKAFSAEFRGEVQPAFNRLHTFFQQAQSTTL EIKKVFQQAEEEAAALFRGDVFGGGANGNGSGNGTAGNGNGSGSGSGSGNTGDGGTGTGGSGSGPTFKGKVKVHTYDYKT KTGETKPQLKLGVSGALLEDKGDLIKVDGPIPYTLKGKYQVGYGEAGIGLGVNGDKKFTIGPYVEGTVAKGELTNVYGDK NFGYTETLEGKALSVEGFAGLKDGSVGATIGGTLVSVQATKGLNVAGVNVGVTAEVGLKAELGFSIGKETKIKLPFVSFG FSFGGAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33654; Mature: 33523
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDTIQAKYDELDQVASRFGKAADTTTAIFKSLESMANRLEGGDWQGDAQKAFSAEFRG CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC EVQPAFNRLHTFFQQAQSTTLEIKKVFQQAEEEAAALFRGDVFGGGANGNGSGNGTAGNG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCC NGSGSGSGSGNTGDGGTGTGGSGSGPTFKGKVKVHTYDYKTKTGETKPQLKLGVSGALLE CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEECCCCEEEE DKGDLIKVDGPIPYTLKGKYQVGYGEAGIGLGVNGDKKFTIGPYVEGTVAKGELTNVYGD CCCCEEEECCCCCEEEECCEEECCCCCCCEECCCCCCEEEECCCCCCEEECCCEEEECCC KNFGYTETLEGKALSVEGFAGLKDGSVGATIGGTLVSVQATKGLNVAGVNVGVTAEVGLK CCCCCCEECCCCEEEECCCCCCCCCCCCEEECCEEEEEEECCCCEEEEEEEEEEEECCCE AELGFSIGKETKIKLPFVSFGFSFGGAK EECCCCCCCCCEEEECEEEECCCCCCCC >Mature Secondary Structure AQDTIQAKYDELDQVASRFGKAADTTTAIFKSLESMANRLEGGDWQGDAQKAFSAEFRG CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC EVQPAFNRLHTFFQQAQSTTLEIKKVFQQAEEEAAALFRGDVFGGGANGNGSGNGTAGNG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCC NGSGSGSGSGNTGDGGTGTGGSGSGPTFKGKVKVHTYDYKTKTGETKPQLKLGVSGALLE CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEECCCCEEEE DKGDLIKVDGPIPYTLKGKYQVGYGEAGIGLGVNGDKKFTIGPYVEGTVAKGELTNVYGD CCCCEEEECCCCCEEEECCEEECCCCCCCEECCCCCCEEEECCCCCCEEECCCEEEECCC KNFGYTETLEGKALSVEGFAGLKDGSVGATIGGTLVSVQATKGLNVAGVNVGVTAEVGLK CCCCCCEECCCCEEEECCCCCCCCCCCCEEECCEEEEEEECCCCEEEEEEEEEEEECCCE AELGFSIGKETKIKLPFVSFGFSFGGAK EECCCCCCCCCEEEECEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA