| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899104
Identifier: 159899104
GI number: 159899104
Start: 3318596
End: 3319393
Strand: Direct
Name: 159899104
Synonym: Haur_2585
Alternate gene names: NA
Gene position: 3318596-3319393 (Clockwise)
Preceding gene: 159899103
Following gene: 159899105
Centisome position: 52.29
GC content: 47.24
Gene sequence:
>798_bases ATGGATGGACTTATTTTAGAGCGTAACGAGTTTTTAGTGTTACTCGAAGCAGCTCGTACCAATAAAATCATTGGCTTAGA TAATGAAACGTTGGTTCCGCATGATCAAGCAACCCACCTTGCAGCGCTCAATCAAGGCGTACAAGGGTTGGTTGCCAAAG AATTAGCCACAATCAACGAAGATGAAGTCGTCATGATCGAACGCGAAATTTTAGAATTTTCGCAAATTGTGGCCTTTCCC GATATTGCCTTTATCACCACCCGCGATACACCAAATGTCGGCAGTCAATTATTCCTACACTATGTCAATCAGTTAGGTGT AGTTGAGCAAACTTTGCCAAACGAGCAACAGCATCGCTTGGCATTCTTGCCCGATATGTTGGTGCTCTTTGATCGGTTGG CATTTTTGCTCGAAGTTCAACCAAGCAAAGCCTTTGAGGCCAGTGTGCGGCTCAGCCAAAGCGAGTTCATGGCAATCAAA GAGCTAGCTGAAAATCGCGCCGAAGCCGAGGCTTTCAACCGCCTAAGCCGCGCCGGGCTTGACGAGCAAGCAGCTCAAGC CTTAATTGCAGCAATTCAAGCGCCGATCTTTAGTGCGTCGTTGGCAATTCTGCGCTGCGAAGATACTGAAATTGTCGATG CGATCAACCCAGCGATTTTGCAAGGGCCAACCAGTGCTTGGGCAATTCAGCTTGATGAAGCTGATCTCGAAACCTTCGAG GTTCAATCAATCGATCAAACTTGGCTGCGTCAACACATTCAACACTGGTTTGAGCAACTGGCAACTGCCGCCTTATAA
Upstream 100 bases:
>100_bases TGGCTTTAGCATCGGTAAAGAAACCAAAATTAAATTGCCATTTGTCTCGTTTGGCTTCTCGTTTGGTGGAGCCAAATAAC CTAGAGAAGGGGTTAACTCA
Downstream 100 bases:
>100_bases ACTCAATTGGCCGATTTAACGGCCAGCGAAGAACCATGAACCAGCGCTTAACGCCTGATTGTTCATGGTTCTTTATTTTG ATCGTTGTCCAAAAGGTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MDGLILERNEFLVLLEAARTNKIIGLDNETLVPHDQATHLAALNQGVQGLVAKELATINEDEVVMIEREILEFSQIVAFP DIAFITTRDTPNVGSQLFLHYVNQLGVVEQTLPNEQQHRLAFLPDMLVLFDRLAFLLEVQPSKAFEASVRLSQSEFMAIK ELAENRAEAEAFNRLSRAGLDEQAAQALIAAIQAPIFSASLAILRCEDTEIVDAINPAILQGPTSAWAIQLDEADLETFE VQSIDQTWLRQHIQHWFEQLATAAL
Sequences:
>Translated_265_residues MDGLILERNEFLVLLEAARTNKIIGLDNETLVPHDQATHLAALNQGVQGLVAKELATINEDEVVMIEREILEFSQIVAFP DIAFITTRDTPNVGSQLFLHYVNQLGVVEQTLPNEQQHRLAFLPDMLVLFDRLAFLLEVQPSKAFEASVRLSQSEFMAIK ELAENRAEAEAFNRLSRAGLDEQAAQALIAAIQAPIFSASLAILRCEDTEIVDAINPAILQGPTSAWAIQLDEADLETFE VQSIDQTWLRQHIQHWFEQLATAAL >Mature_265_residues MDGLILERNEFLVLLEAARTNKIIGLDNETLVPHDQATHLAALNQGVQGLVAKELATINEDEVVMIEREILEFSQIVAFP DIAFITTRDTPNVGSQLFLHYVNQLGVVEQTLPNEQQHRLAFLPDMLVLFDRLAFLLEVQPSKAFEASVRLSQSEFMAIK ELAENRAEAEAFNRLSRAGLDEQAAQALIAAIQAPIFSASLAILRCEDTEIVDAINPAILQGPTSAWAIQLDEADLETFE VQSIDQTWLRQHIQHWFEQLATAAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29566; Mature: 29566
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGLILERNEFLVLLEAARTNKIIGLDNETLVPHDQATHLAALNQGVQGLVAKELATINE CCCEEEECCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC DEVVMIEREILEFSQIVAFPDIAFITTRDTPNVGSQLFLHYVNQLGVVEQTLPNEQQHRL CCEEEHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH AFLPDMLVLFDRLAFLLEVQPSKAFEASVRLSQSEFMAIKELAENRAEAEAFNRLSRAGL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC DEQAAQALIAAIQAPIFSASLAILRCEDTEIVDAINPAILQGPTSAWAIQLDEADLETFE CHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHCCHHHHCCCCCEEEEEECCCCCCHHH VQSIDQTWLRQHIQHWFEQLATAAL HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDGLILERNEFLVLLEAARTNKIIGLDNETLVPHDQATHLAALNQGVQGLVAKELATINE CCCEEEECCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC DEVVMIEREILEFSQIVAFPDIAFITTRDTPNVGSQLFLHYVNQLGVVEQTLPNEQQHRL CCEEEHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH AFLPDMLVLFDRLAFLLEVQPSKAFEASVRLSQSEFMAIKELAENRAEAEAFNRLSRAGL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC DEQAAQALIAAIQAPIFSASLAILRCEDTEIVDAINPAILQGPTSAWAIQLDEADLETFE CHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHCCHHHHCCCCCEEEEEECCCCCCHHH VQSIDQTWLRQHIQHWFEQLATAAL HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA