| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899102
Identifier: 159899102
GI number: 159899102
Start: 3317021
End: 3317284
Strand: Direct
Name: 159899102
Synonym: Haur_2583
Alternate gene names: NA
Gene position: 3317021-3317284 (Clockwise)
Preceding gene: 159899101
Following gene: 159899103
Centisome position: 52.26
GC content: 49.62
Gene sequence:
>264_bases ATGAGCGATTTAGAACATCTGCAAAGTTTGGTCGAAGATGCCTTTTTGGAAGCGCCCTTGATGTATGCAAATGGCTTTAT CAACGGTTTAGGAGCAACCGATGCCTATACCGTGTTACAAACCAATGGCCGCGCCGTTGCCGTCGTAAATATGTCGTTGC CAGTCGCGAAAACCCTTGGCCAAGGGCTTTTGGCTATGATTGCAGCCTACGAGGAGCAAACTGGGGACACCGTAGCAACC CTCGATCAAATCCACGGACGTTAA
Upstream 100 bases:
>100_bases TCGGATTAGGTTATTCGCCGAAAAATCAATATGCAGTTAAAATAGCGCTTGGTTCAGATCAGCGCTATTTTTATGCGCAA TGTAGCATTTAGGAGCAATA
Downstream 100 bases:
>100_bases TTATGTAGCCTGATCAAACGAGATGCAATTACTTCATCTCGTTTGATCGATTTACGGGCCACGAATTAACTTAAAAATCC ATCAAAAGCCCCTCTTGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSDLEHLQSLVEDAFLEAPLMYANGFINGLGATDAYTVLQTNGRAVAVVNMSLPVAKTLGQGLLAMIAAYEEQTGDTVAT LDQIHGR
Sequences:
>Translated_87_residues MSDLEHLQSLVEDAFLEAPLMYANGFINGLGATDAYTVLQTNGRAVAVVNMSLPVAKTLGQGLLAMIAAYEEQTGDTVAT LDQIHGR >Mature_86_residues SDLEHLQSLVEDAFLEAPLMYANGFINGLGATDAYTVLQTNGRAVAVVNMSLPVAKTLGQGLLAMIAAYEEQTGDTVATL DQIHGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9224; Mature: 9092
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLEHLQSLVEDAFLEAPLMYANGFINGLGATDAYTVLQTNGRAVAVVNMSLPVAKTLG CCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHH QGLLAMIAAYEEQTGDTVATLDQIHGR HHHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure SDLEHLQSLVEDAFLEAPLMYANGFINGLGATDAYTVLQTNGRAVAVVNMSLPVAKTLG CHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHH QGLLAMIAAYEEQTGDTVATLDQIHGR HHHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA