The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898954

Identifier: 159898954

GI number: 159898954

Start: 3117494

End: 3118222

Strand: Reverse

Name: 159898954

Synonym: Haur_2433

Alternate gene names: NA

Gene position: 3118222-3117494 (Counterclockwise)

Preceding gene: 159898959

Following gene: 159898953

Centisome position: 49.13

GC content: 48.15

Gene sequence:

>729_bases
GTGGTACGGATTCCAACCTTGGCTGGCCTGATTCGCCGTCGTTTACTCCTCAATTTTCGCGCTGATCCAGAGGTTGTTCA
AGCCTTATTACCAGCACCATTTAAACCGCAACTTTATCGCGGCTGGGCGATTGTGGGCATTTGTTTAATTCGCTTAGAAC
AGCTGCGTCCGCTTGGCTTGCCAAGCGGGTTCGGCTTGCGAAGCGAAAACGCTGCCCATCGTTTTGCCGTAAATTGGCAG
GCGGTTGATGGCTCATTGCACCAAGGAGTGTATGTACCACGCCGCGATTCATCATCGCTTTTAAATAATTTAGCAGGTGG
ACGGTTGGTTGCTGGCGAGCAGCATCATGCGCATTTTGTGGTTGACGATAATGGCTACACTGTTCAATTACGAATGCGTT
CGGGCGATGATCAGGCCTCAATTGAGGTTGTCGGTACAACCTGTGAAAGCTTACCGCGCGATTCGATTTTCGATCTTGCT
GCCGCCTCAAGCTTTTTTGAGCATGGAGCGTTGGGCTATACTGCAACCAAACATGGGCAACGCTTTGATGGATTAACCCT
CAATGTTCAGCATTGGCATGTCCGTCCATTTGCAGTTGATCAGTTTGATTCGAGCTATTTTCGCAATCAACAAAACTTTC
CTGTTGGCAGCATTGAATTTGATCATGGCTTAATTATGCGTGATGTTCAACATACATGGCAAAGCGTTGCCTCATTATCG
GTAGCTTGA

Upstream 100 bases:

>100_bases
AAATGATCTACTTGTCAAGTAATCGGTTTAAGCATGGATTGCTAAGGCAGGCCGTGTGGTTTATCGTGTTGGTTCTATGA
GTAGAAATTAGGAGGGTATT

Downstream 100 bases:

>100_bases
TTTTGGCTTGGTCATCAGTTTGAAACGATCGCCGTGCTATAATCGAGCCGATTATCCTACCTGTTGCTGCGTGCATCAGC
AGGCCAAGAGGGTTAATGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MVRIPTLAGLIRRRLLLNFRADPEVVQALLPAPFKPQLYRGWAIVGICLIRLEQLRPLGLPSGFGLRSENAAHRFAVNWQ
AVDGSLHQGVYVPRRDSSSLLNNLAGGRLVAGEQHHAHFVVDDNGYTVQLRMRSGDDQASIEVVGTTCESLPRDSIFDLA
AASSFFEHGALGYTATKHGQRFDGLTLNVQHWHVRPFAVDQFDSSYFRNQQNFPVGSIEFDHGLIMRDVQHTWQSVASLS
VA

Sequences:

>Translated_242_residues
MVRIPTLAGLIRRRLLLNFRADPEVVQALLPAPFKPQLYRGWAIVGICLIRLEQLRPLGLPSGFGLRSENAAHRFAVNWQ
AVDGSLHQGVYVPRRDSSSLLNNLAGGRLVAGEQHHAHFVVDDNGYTVQLRMRSGDDQASIEVVGTTCESLPRDSIFDLA
AASSFFEHGALGYTATKHGQRFDGLTLNVQHWHVRPFAVDQFDSSYFRNQQNFPVGSIEFDHGLIMRDVQHTWQSVASLS
VA
>Mature_242_residues
MVRIPTLAGLIRRRLLLNFRADPEVVQALLPAPFKPQLYRGWAIVGICLIRLEQLRPLGLPSGFGLRSENAAHRFAVNWQ
AVDGSLHQGVYVPRRDSSSLLNNLAGGRLVAGEQHHAHFVVDDNGYTVQLRMRSGDDQASIEVVGTTCESLPRDSIFDLA
AASSFFEHGALGYTATKHGQRFDGLTLNVQHWHVRPFAVDQFDSSYFRNQQNFPVGSIEFDHGLIMRDVQHTWQSVASLS
VA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26955; Mature: 26955

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRIPTLAGLIRRRLLLNFRADPEVVQALLPAPFKPQLYRGWAIVGICLIRLEQLRPLGL
CEECCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCC
PSGFGLRSENAAHRFAVNWQAVDGSLHQGVYVPRRDSSSLLNNLAGGRLVAGEQHHAHFV
CCCCCCCCCCCCEEEEEEEEEECCCCCCCEEECCCCHHHHHHHCCCCEEEECCCCCEEEE
VDDNGYTVQLRMRSGDDQASIEVVGTTCESLPRDSIFDLAAASSFFEHGALGYTATKHGQ
ECCCCEEEEEEEECCCCCEEEEEEECCHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCCC
RFDGLTLNVQHWHVRPFAVDQFDSSYFRNQQNFPVGSIEFDHGLIMRDVQHTWQSVASLS
CCCCEEEEEEEEEECCEEHHHCCHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHC
VA
CC
>Mature Secondary Structure
MVRIPTLAGLIRRRLLLNFRADPEVVQALLPAPFKPQLYRGWAIVGICLIRLEQLRPLGL
CEECCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCC
PSGFGLRSENAAHRFAVNWQAVDGSLHQGVYVPRRDSSSLLNNLAGGRLVAGEQHHAHFV
CCCCCCCCCCCCEEEEEEEEEECCCCCCCEEECCCCHHHHHHHCCCCEEEECCCCCEEEE
VDDNGYTVQLRMRSGDDQASIEVVGTTCESLPRDSIFDLAAASSFFEHGALGYTATKHGQ
ECCCCEEEEEEEECCCCCEEEEEEECCHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCCC
RFDGLTLNVQHWHVRPFAVDQFDSSYFRNQQNFPVGSIEFDHGLIMRDVQHTWQSVASLS
CCCCEEEEEEEEEECCEEHHHCCHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHC
VA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA