| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yghZ [H]
Identifier: 159898953
GI number: 159898953
Start: 3116400
End: 3117392
Strand: Reverse
Name: yghZ [H]
Synonym: Haur_2432
Alternate gene names: 159898953
Gene position: 3117392-3116400 (Counterclockwise)
Preceding gene: 159898954
Following gene: 159898951
Centisome position: 49.12
GC content: 50.25
Gene sequence:
>993_bases ATGATTTATCAAGCCAAGGATAGCCGCTACACCAGCATGCGCTACAATCGCAGTGGCAAAAGTGGCCTGAAATTATCAGC AGTTTCATTAGGGTTATGGCACAATTTTGGTGGCGTTGATGTCTATGAGAATGGGCGGTCGATGGTGCTGCATGCCTTTG ATCATGGCATTACTCACTTCGACCTCGCCAATAACTATGGCCCGCCGCCAGGCTCTGCCGAAGAAAATTTTGGCCGGATG CTCCAGCATGATCTTAAACCCTACCGTGATGAATTGGTGATTTCGACCAAGGCTGGCTACTATATGTGGGCTGGCCCGTA TGGCGATTGGGGTTCGCGTAAGTATCTGGTTTCCAGCCTTGATCAAAGCTTAAAGCGCATGGGCTTGGAGTACGTTGATA TTTTCTATCATCATCGCCCCGACCCCGAAACGCCGCTCGAAGAAACCATGCAAGCCCTCGATCAGATTGTACGTAGTGGT AAGGCGCTCTATGTGGGGCTTTCCAATTATTCTGCTGAGCAAACTGCCGCCGCGAGCGCGATTCTGCGCCAACTTGGCAC ACCATGTTTGATCCACCAACCATCCTACAATATGTTCAATCGCTGGGTTGAGGGTGGTTTGTTGGCAACCTTGGCCGAGC AAGGCATTGGCTGTATTGCTTTTTCGCCGCTGGCCCAAGGCCTGTTAACTGATCGCTATTTGCAAGGCATTCCAGGCGAT TCGCGTGCCGCCAAATCGCATGGCTTTCTCAAGCCTGCCCATATTACCGATAGTGCTTTAGCTAAAGTTGCTCAGTTGAA TGATTTGGCGCAAGCTCGCGACCAAACTTTAGCCCAAATGGCCTTGGCTTGGGTGTTGCGCCACCCAACTATGACCTCAG TGTTAATCGGAGCTAGCCGTATTTCGCAGATCGACGATGCCATTACAGCCCTCAACAATTTGACATTTAGTGATGAAGAA CTTGCTACGATTGAAACCGTTCTAAGCGAGTGA
Upstream 100 bases:
>100_bases TTTGGCTTGGTCATCAGTTTGAAACGATCGCCGTGCTATAATCGAGCCGATTATCCTACCTGTTGCTGCGTGCATCAGCA GGCCAAGAGGGTTAATGTCT
Downstream 100 bases:
>100_bases TTTTCCTTGGGAATATGTCCCTCACCCGCCGAGCGAGGCGAGGGAGAACCACGAAACCAAAAGCCCCTCGCCCACCGCAG TGGGAGAGGGGTTGGGGTGA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MIYQAKDSRYTSMRYNRSGKSGLKLSAVSLGLWHNFGGVDVYENGRSMVLHAFDHGITHFDLANNYGPPPGSAEENFGRM LQHDLKPYRDELVISTKAGYYMWAGPYGDWGSRKYLVSSLDQSLKRMGLEYVDIFYHHRPDPETPLEETMQALDQIVRSG KALYVGLSNYSAEQTAAASAILRQLGTPCLIHQPSYNMFNRWVEGGLLATLAEQGIGCIAFSPLAQGLLTDRYLQGIPGD SRAAKSHGFLKPAHITDSALAKVAQLNDLAQARDQTLAQMALAWVLRHPTMTSVLIGASRISQIDDAITALNNLTFSDEE LATIETVLSE
Sequences:
>Translated_330_residues MIYQAKDSRYTSMRYNRSGKSGLKLSAVSLGLWHNFGGVDVYENGRSMVLHAFDHGITHFDLANNYGPPPGSAEENFGRM LQHDLKPYRDELVISTKAGYYMWAGPYGDWGSRKYLVSSLDQSLKRMGLEYVDIFYHHRPDPETPLEETMQALDQIVRSG KALYVGLSNYSAEQTAAASAILRQLGTPCLIHQPSYNMFNRWVEGGLLATLAEQGIGCIAFSPLAQGLLTDRYLQGIPGD SRAAKSHGFLKPAHITDSALAKVAQLNDLAQARDQTLAQMALAWVLRHPTMTSVLIGASRISQIDDAITALNNLTFSDEE LATIETVLSE >Mature_330_residues MIYQAKDSRYTSMRYNRSGKSGLKLSAVSLGLWHNFGGVDVYENGRSMVLHAFDHGITHFDLANNYGPPPGSAEENFGRM LQHDLKPYRDELVISTKAGYYMWAGPYGDWGSRKYLVSSLDQSLKRMGLEYVDIFYHHRPDPETPLEETMQALDQIVRSG KALYVGLSNYSAEQTAAASAILRQLGTPCLIHQPSYNMFNRWVEGGLLATLAEQGIGCIAFSPLAQGLLTDRYLQGIPGD SRAAKSHGFLKPAHITDSALAKVAQLNDLAQARDQTLAQMALAWVLRHPTMTSVLIGASRISQIDDAITALNNLTFSDEE LATIETVLSE
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4504825, Length=342, Percent_Identity=36.2573099415205, Blast_Score=182, Evalue=3e-46, Organism=Homo sapiens, GI27436969, Length=325, Percent_Identity=36.6153846153846, Blast_Score=182, Evalue=3e-46, Organism=Homo sapiens, GI27436964, Length=315, Percent_Identity=34.2857142857143, Blast_Score=170, Evalue=1e-42, Organism=Homo sapiens, GI27436962, Length=312, Percent_Identity=34.6153846153846, Blast_Score=168, Evalue=6e-42, Organism=Homo sapiens, GI27436966, Length=312, Percent_Identity=34.2948717948718, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI27436971, Length=315, Percent_Identity=34.2857142857143, Blast_Score=158, Evalue=5e-39, Organism=Homo sapiens, GI41152114, Length=209, Percent_Identity=31.5789473684211, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI223718702, Length=211, Percent_Identity=31.2796208530806, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI41327764, Length=211, Percent_Identity=31.2796208530806, Blast_Score=86, Evalue=6e-17, Organism=Escherichia coli, GI1789375, Length=335, Percent_Identity=60.5970149253731, Blast_Score=410, Evalue=1e-116, Organism=Escherichia coli, GI87081735, Length=323, Percent_Identity=34.0557275541796, Blast_Score=162, Evalue=4e-41, Organism=Escherichia coli, GI1789199, Length=348, Percent_Identity=29.3103448275862, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1788070, Length=326, Percent_Identity=28.8343558282209, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI48994888, Length=275, Percent_Identity=26.9090909090909, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1788081, Length=307, Percent_Identity=25.7328990228013, Blast_Score=65, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6325169, Length=340, Percent_Identity=26.7647058823529, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6322615, Length=260, Percent_Identity=25.3846153846154, Blast_Score=73, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6323998, Length=329, Percent_Identity=23.1003039513678, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319958, Length=290, Percent_Identity=25.1724137931034, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319951, Length=295, Percent_Identity=24.406779661017, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI24640980, Length=343, Percent_Identity=26.8221574344023, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI45549126, Length=343, Percent_Identity=26.8221574344023, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI24646155, Length=327, Percent_Identity=27.217125382263, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 36447; Mature: 36447
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYQAKDSRYTSMRYNRSGKSGLKLSAVSLGLWHNFGGVDVYENGRSMVLHAFDHGITHF CCCCCCCCCHHHEEECCCCCCCCEEEEEEEEHHHCCCCEEEEECCCEEEEEHHHCCCEEE DLANNYGPPPGSAEENFGRMLQHDLKPYRDELVISTKAGYYMWAGPYGDWGSRKYLVSSL ECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHEEEEECCCEEEEECCCCCCCCHHHHHHHH DQSLKRMGLEYVDIFYHHRPDPETPLEETMQALDQIVRSGKALYVGLSNYSAEQTAAASA HHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH ILRQLGTPCLIHQPSYNMFNRWVEGGLLATLAEQGIGCIAFSPLAQGLLTDRYLQGIPGD HHHHHCCCEEEECCCHHHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCC SRAAKSHGFLKPAHITDSALAKVAQLNDLAQARDQTLAQMALAWVLRHPTMTSVLIGASR CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ISQIDDAITALNNLTFSDEELATIETVLSE HHHHHHHHHHHHCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MIYQAKDSRYTSMRYNRSGKSGLKLSAVSLGLWHNFGGVDVYENGRSMVLHAFDHGITHF CCCCCCCCCHHHEEECCCCCCCCEEEEEEEEHHHCCCCEEEEECCCEEEEEHHHCCCEEE DLANNYGPPPGSAEENFGRMLQHDLKPYRDELVISTKAGYYMWAGPYGDWGSRKYLVSSL ECCCCCCCCCCCCHHHHHHHHHHHCCCHHHHEEEEECCCEEEEECCCCCCCCHHHHHHHH DQSLKRMGLEYVDIFYHHRPDPETPLEETMQALDQIVRSGKALYVGLSNYSAEQTAAASA HHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH ILRQLGTPCLIHQPSYNMFNRWVEGGLLATLAEQGIGCIAFSPLAQGLLTDRYLQGIPGD HHHHHCCCEEEECCCHHHHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCC SRAAKSHGFLKPAHITDSALAKVAQLNDLAQARDQTLAQMALAWVLRHPTMTSVLIGASR CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ISQIDDAITALNNLTFSDEELATIETVLSE HHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]