| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898926
Identifier: 159898926
GI number: 159898926
Start: 3064638
End: 3066443
Strand: Reverse
Name: 159898926
Synonym: Haur_2405
Alternate gene names: NA
Gene position: 3066443-3064638 (Counterclockwise)
Preceding gene: 159898927
Following gene: 159898924
Centisome position: 48.32
GC content: 48.06
Gene sequence:
>1806_bases ATGGGTTCTTTTGTCCGTGGATTGCTGGTTATGGTGAGTTTCGTGAGCCTGCTGGGTTTGATGTTGCCCGCCCAAGCAGC GAGCCTGCAAACCACCTTTGTGGTAACAACGGCGGATGATGATTTTATTGCCGATAATGGCACATGTTCGTTGCGCGAGG CGCTTTATGCCGCCAATACCAACCAAGCCTATGATGCATGCCCAGCTGGTGGGGCGAATGATACGATTCAGCTCGCGGCG GCAAACTATCGTTTAACCCGTACTGGCATGAATGATGAGACTGGTGTGCTTGGCGATTTGGATATTTTGAGCGATTTAAC GATTACTGGGGTGAGTTCGGCCACCACGATCATTGATGGCATGGAAAGTGATCGTGTGTTGGATATCTACACCGCAACCG TTACCCTGAACAATCTACAAATTCGCAATGGTTTTGTGGATAACGATGATGAGCTTGGGCGCTATTACGGCCATGGCATT TTGCAACGCTATGGCAATCTGCAGATTCAATCGAGTTTGATTGAACGCAATGGCTTGCTGCGTTCGACGATGCTGGCAAA CAATTATGGTGGTGGCATTGCTAGCCTGAATGGAACCCTCAGCATCGTCGATAGTACCATTCGGAGTAATGCTTTACGCT CATATGTTGATGGGTTTGATGAAGGTAGTGGTCATGGAGCCGGCTTATACATCAGTAGTCAAGCGGTTACTATTACCAAT TCGCTTTTTGATAACAATCAGCGTGGTTTTGGGCCGGCGATTTATATGATCAAGGGCAATTTAAGTCTGCTGAATAGCGT GATTCAACGTTCATCCGATAGTCATCAAACCTCGGCTGCGATCAATGTGCTGGGTGGGCAGCTAAGGATAACGGGTGGTG GGTTGTTGAATAATACGCCACAGGGCTTGTCGCTGCGCGGAGCAAGTAGCGCCACGCTTGCTGATACCACCTTTGTTGGA AATGGCTCTAGTGATCCGAATGCCCGTGAATGCTCGCGTGGTGGAGCAATTTATAACGCGGCAACGCTTTCGATTATGCA TAGTCGCTTTATTGGTAATTATGCTGATCTCGGCGGAGCACTCTATCAGCATGCTGGGAAGGCAACGCTGCTTGATAGTG AATGGGTTGAAAACCGTAGTAGTGGTGGTGTTCGGAATGATGAAGAGTGTTTTGGTTATGGTGGCGCAATCTACCAAAAT TTAGGTGTGGTAACGCTTGACACCAGCACGATCGCCCATAATTACTCGTTTCATACTGGTAGCGGGATTGCCCAACTCCA AGCGACCGCCATAATGACAATTACCAATTCAACGATTGTTTCTAATACCAATCGCTACTATGAATATGATCCGGAATATC CAGATATGCGAACGGCGGGTCTCTATGCAACTGGCCGCATGAGCCTAGGCAATACAATTGTGGCCAATAACTATAATACA AGTGTAGCTGATGCCTATGATTGTATGGGCACGGTTCTGAGTCTTGGCCATAACCTGTTGGAGCATCCCCGCCCGCAAGC AATGTATCAATGTATCTTTCAAGCGCAAGCGAGTGATCAACTTAATCTTGACCCGATCCTCGATCAATTTGATTTTCATT CGGGCACAACTCGGAGTTATAGCCTTAATCCGCTAAGTCCAGCGATTGATGCTGGTGCTGATTGTGGCCCGTTTGATCAG CGCGGAATTCCCCGCCCACAAGATGGTGATGGCGATCTGCAAGCGGTTTGTGATATTGGCGCATTTGAATATAGTTTGCC TGCGCCAACCCGTTTTATGCTGTTTGCACCCTACATTAGCCAATAG
Upstream 100 bases:
>100_bases AACTCCACAAATGTGCCCAAAAAAGCCGAGCTTTTTAGATTGTGTTTATATCCACCATCGCCGATACTAGCCTTGCTGTT ACTTTGGCTGTGGAGGGTTT
Downstream 100 bases:
>100_bases TTAAACAATCAGGCGGGGATGTTTGATTCATCCCCGCCGAATGGGTTGCCTAAAACCGTTAAATTTAGGGCTTAGAGTTC ATCACGTTCAAGCCATTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Adhesin Like Proteiin
Number of amino acids: Translated: 601; Mature: 600
Protein sequence:
>601_residues MGSFVRGLLVMVSFVSLLGLMLPAQAASLQTTFVVTTADDDFIADNGTCSLREALYAANTNQAYDACPAGGANDTIQLAA ANYRLTRTGMNDETGVLGDLDILSDLTITGVSSATTIIDGMESDRVLDIYTATVTLNNLQIRNGFVDNDDELGRYYGHGI LQRYGNLQIQSSLIERNGLLRSTMLANNYGGGIASLNGTLSIVDSTIRSNALRSYVDGFDEGSGHGAGLYISSQAVTITN SLFDNNQRGFGPAIYMIKGNLSLLNSVIQRSSDSHQTSAAINVLGGQLRITGGGLLNNTPQGLSLRGASSATLADTTFVG NGSSDPNARECSRGGAIYNAATLSIMHSRFIGNYADLGGALYQHAGKATLLDSEWVENRSSGGVRNDEECFGYGGAIYQN LGVVTLDTSTIAHNYSFHTGSGIAQLQATAIMTITNSTIVSNTNRYYEYDPEYPDMRTAGLYATGRMSLGNTIVANNYNT SVADAYDCMGTVLSLGHNLLEHPRPQAMYQCIFQAQASDQLNLDPILDQFDFHSGTTRSYSLNPLSPAIDAGADCGPFDQ RGIPRPQDGDGDLQAVCDIGAFEYSLPAPTRFMLFAPYISQ
Sequences:
>Translated_601_residues MGSFVRGLLVMVSFVSLLGLMLPAQAASLQTTFVVTTADDDFIADNGTCSLREALYAANTNQAYDACPAGGANDTIQLAA ANYRLTRTGMNDETGVLGDLDILSDLTITGVSSATTIIDGMESDRVLDIYTATVTLNNLQIRNGFVDNDDELGRYYGHGI LQRYGNLQIQSSLIERNGLLRSTMLANNYGGGIASLNGTLSIVDSTIRSNALRSYVDGFDEGSGHGAGLYISSQAVTITN SLFDNNQRGFGPAIYMIKGNLSLLNSVIQRSSDSHQTSAAINVLGGQLRITGGGLLNNTPQGLSLRGASSATLADTTFVG NGSSDPNARECSRGGAIYNAATLSIMHSRFIGNYADLGGALYQHAGKATLLDSEWVENRSSGGVRNDEECFGYGGAIYQN LGVVTLDTSTIAHNYSFHTGSGIAQLQATAIMTITNSTIVSNTNRYYEYDPEYPDMRTAGLYATGRMSLGNTIVANNYNT SVADAYDCMGTVLSLGHNLLEHPRPQAMYQCIFQAQASDQLNLDPILDQFDFHSGTTRSYSLNPLSPAIDAGADCGPFDQ RGIPRPQDGDGDLQAVCDIGAFEYSLPAPTRFMLFAPYISQ >Mature_600_residues GSFVRGLLVMVSFVSLLGLMLPAQAASLQTTFVVTTADDDFIADNGTCSLREALYAANTNQAYDACPAGGANDTIQLAAA NYRLTRTGMNDETGVLGDLDILSDLTITGVSSATTIIDGMESDRVLDIYTATVTLNNLQIRNGFVDNDDELGRYYGHGIL QRYGNLQIQSSLIERNGLLRSTMLANNYGGGIASLNGTLSIVDSTIRSNALRSYVDGFDEGSGHGAGLYISSQAVTITNS LFDNNQRGFGPAIYMIKGNLSLLNSVIQRSSDSHQTSAAINVLGGQLRITGGGLLNNTPQGLSLRGASSATLADTTFVGN GSSDPNARECSRGGAIYNAATLSIMHSRFIGNYADLGGALYQHAGKATLLDSEWVENRSSGGVRNDEECFGYGGAIYQNL GVVTLDTSTIAHNYSFHTGSGIAQLQATAIMTITNSTIVSNTNRYYEYDPEYPDMRTAGLYATGRMSLGNTIVANNYNTS VADAYDCMGTVLSLGHNLLEHPRPQAMYQCIFQAQASDQLNLDPILDQFDFHSGTTRSYSLNPLSPAIDAGADCGPFDQR GIPRPQDGDGDLQAVCDIGAFEYSLPAPTRFMLFAPYISQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64067; Mature: 63936
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSFVRGLLVMVSFVSLLGLMLPAQAASLQTTFVVTTADDDFIADNGTCSLREALYAANT CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEECCCCCHHHHHHHHHCCC NQAYDACPAGGANDTIQLAAANYRLTRTGMNDETGVLGDLDILSDLTITGVSSATTIIDG CCCCCCCCCCCCCCEEEEEEECEEEEECCCCCCCCCEECHHHHHCCEEECCCCHHHHHCC MESDRVLDIYTATVTLNNLQIRNGFVDNDDELGRYYGHGILQRYGNLQIQSSLIERNGLL CCCCCEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHCCCC RSTMLANNYGGGIASLNGTLSIVDSTIRSNALRSYVDGFDEGSGHGAGLYISSQAVTITN HHHHHHCCCCCCEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEH SLFDNNQRGFGPAIYMIKGNLSLLNSVIQRSSDSHQTSAAINVLGGQLRITGGGLLNNTP HHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHEEECCEEEEECCCCCCCCC QGLSLRGASSATLADTTFVGNGSSDPNARECSRGGAIYNAATLSIMHSRFIGNYADLGGA CCCEECCCCCCEEEEEEEECCCCCCCCHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHHHH LYQHAGKATLLDSEWVENRSSGGVRNDEECFGYGGAIYQNLGVVTLDTSTIAHNYSFHTG HHHHCCCEEEECHHHHHCCCCCCCCCCHHHHCCCCHHHHCCCEEEEECHHHEECCCEECC SGIAQLQATAIMTITNSTIVSNTNRYYEYDPEYPDMRTAGLYATGRMSLGNTIVANNYNT CCHHEEEEEEEEEEECCEEEECCCCEEEECCCCCCCCCCCEEEECCCCCCCEEEECCCCC SVADAYDCMGTVLSLGHNLLEHPRPQAMYQCIFQAQASDQLNLDPILDQFDFHSGTTRSY CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCEE SLNPLSPAIDAGADCGPFDQRGIPRPQDGDGDLQAVCDIGAFEYSLPAPTRFMLFAPYIS ECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHEEEECCCEEECCCCCCEEEEECCCCC Q C >Mature Secondary Structure GSFVRGLLVMVSFVSLLGLMLPAQAASLQTTFVVTTADDDFIADNGTCSLREALYAANT CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEECCCCCHHHHHHHHHCCC NQAYDACPAGGANDTIQLAAANYRLTRTGMNDETGVLGDLDILSDLTITGVSSATTIIDG CCCCCCCCCCCCCCEEEEEEECEEEEECCCCCCCCCEECHHHHHCCEEECCCCHHHHHCC MESDRVLDIYTATVTLNNLQIRNGFVDNDDELGRYYGHGILQRYGNLQIQSSLIERNGLL CCCCCEEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEHHHHHHHCCCC RSTMLANNYGGGIASLNGTLSIVDSTIRSNALRSYVDGFDEGSGHGAGLYISSQAVTITN HHHHHHCCCCCCEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEH SLFDNNQRGFGPAIYMIKGNLSLLNSVIQRSSDSHQTSAAINVLGGQLRITGGGLLNNTP HHHCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHEEECCEEEEECCCCCCCCC QGLSLRGASSATLADTTFVGNGSSDPNARECSRGGAIYNAATLSIMHSRFIGNYADLGGA CCCEECCCCCCEEEEEEEECCCCCCCCHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHHHH LYQHAGKATLLDSEWVENRSSGGVRNDEECFGYGGAIYQNLGVVTLDTSTIAHNYSFHTG HHHHCCCEEEECHHHHHCCCCCCCCCCHHHHCCCCHHHHCCCEEEEECHHHEECCCEECC SGIAQLQATAIMTITNSTIVSNTNRYYEYDPEYPDMRTAGLYATGRMSLGNTIVANNYNT CCHHEEEEEEEEEEECCEEEECCCCEEEECCCCCCCCCCCEEEECCCCCCCEEEECCCCC SVADAYDCMGTVLSLGHNLLEHPRPQAMYQCIFQAQASDQLNLDPILDQFDFHSGTTRSY CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCEE SLNPLSPAIDAGADCGPFDQRGIPRPQDGDGDLQAVCDIGAFEYSLPAPTRFMLFAPYIS ECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHEEEECCCEEECCCCCCEEEEECCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA