Click here to switch to the map view.

The map label for this gene is 159898924

Identifier: 159898924

GI number: 159898924

Start: 3061786

End: 3063765

Strand: Reverse

Name: 159898924

Synonym: Haur_2403

Alternate gene names: NA

Gene position: 3063765-3061786 (Counterclockwise)

Preceding gene: 159898926

Following gene: 159898923

Centisome position: 48.27

GC content: 47.98

Gene sequence:

>1980_bases
ATGGCTTTTCATTCTGATCAAACGCTACCGACTATGCGAGTTGCTCGCCGAATTATTGCTGGATTATTGTTGTTGGCTGT
GGTTATTGGGTTGGCGCGAGTTGGGCGGTTTGTCCATGCCCAACCAGCCCAATCAGCGAGCCTCCACGCAAGCGATTGGC
AAGCTATTAGCGAACTGTTACCCCCCAACCAACAAGCCTATCTCAAGGCCTCGAATACCAATCTTGGCGATCTGTTTAGC
TCAAGCGTGGCGATCGATGGCAATACAATTGCGATTGGTGCGCCCAATGAATCAAGTTCGGCAACTGGAATTAATGGCAA
TCAACAGGATAATAGTGTCATTAGTTCAGGTGCAGTTTATATTTTTGTGCGTACTGGGACCACCTGGAGCCAGCAAGCCT
ATATTAAAGCCTCAAATCCCGATTTCAATGATCTATTCGGTCATAGCGTGGCATTGTCTGGTAATACCTTGGTGGTTGGG
GCGGTCAATGAATCAAGTGAGGCCACCGGAATTAATGGCAACCAAACCGATAACAGCGCGATGAATGCTGGGGCCGTTTA
TGTGTTTGTGCGCAGTGGCACGACTTGGAGCCAGCAATCCTATCTCAAAGCTTCAAATGCTGAAGCCTTTGATCAATTTG
GCTGGATTGTCGCGCTTGATGGCAATACCTTAGCGGTTGGGGCTAATCTTGAATCGAGCAATGCGACTGGAGTTAATGGC
AACCAAGCCGATAATAATGCTGTCCGTTCAGGAGCAGCCTATATATTTGTGCGCACTGGCACGACCTGGAGCCAACAAGC
CTATCTCAAAGCCTCAAATACCGAGGCCAACGATAATTTTGCGATGGCACTTGACCTAAGCGGCGATCGCTTGGTGGTTG
GGGCGGTCAATGAAGATAGTGCTGCCACTGGCATTAATGGTGATCAATCCAATAATGATGCAGCTAGTGCTGGCGCAGCC
TATGTTTTTGTGCGCAGTGGCACGACCTGGAGTCAGCAAGCTTACCTCAAAGCCTCAAATACCGAGGCCAACGATTTCTT
CGGCGAGAGCGTGACGATCGATGACTCAACCGTAGCAGTTGGCGCATGGTGGGAAGATAGTTCGGCTACGGGCGTTAATG
GTGACCAAAATAATAATAATACGACCTTTTCAGGAGCAGCCTATGTCTATAGCTTTGATGGTATGAGTTGGAGCCAGCAA
GCCTATATTAAAGCCTCAAATACTGATACTGAAAATTATTTTGGTCATGCATTGGTGTTGCGTGGCGATCGGCTGATTGT
TAGCGCCTATGCTGACGATAGTGCGGCCATTGGCATCAATGGTGATCAACAGAATGCTGATGCTGGCGGTTCTGGAGCGG
CTTTTGTCTTTGCACGAGTTGGTACGGTGTGGAGCCAGCAACACTATTTGAAAGCCTCGAATACTGGAGTTGAAGATACT
TTTGGCTATACCATGGCAACCGATGGTTTAAGTTTGGTGGTTGGTGCAAGGTATGAAGATAGCAATGCAACCGGAATAGA
TGGCAACCAAGCTGATAATAGCGCCGATTTGTCTGGTGCGGCCTATGTGTTTAGCCTAGCACAATCGGTTGCCTATTTAC
CATTGGTCTTTAAACGGATGACGACCCTGATTGCTACGATTAATCCTAATACGATTCCGATTCGCCCGATCACTGTTCAA
GGCGAAACCTTTTTGAGCTCAAGCTTTATATTGCCCAGTGATTTGCCTGCAACTGGTACGTATTATCTTTCGGCGAGTCC
GACGAGCGTTATGCCGAGCTTAGTTGATGATGCGGTGGTATTGTCTGCCAACAGCACCCAGATTTTTCGCCATGAATATT
CAACCCCTAATTCAGCGATTGTAACTGTGCCCTATGCGACCCTCGCTCCGTATGCTGGCCAATCAATCACTGTTCAATTT
AATGATGTTTATGGCAGCGTGGTTCAGGCCTCGCCAATGTATCTGATTTGGGTTCCATAA

Upstream 100 bases:

>100_bases
TCCACAACGTTAGATTAATAGCCCACAAATTAACCCTTGAGCAGGCTGGGGCGGTCTGCTATGCTGCCCAAGCCGTTGCG
AAATAAAAAAGGAGCAGTGC

Downstream 100 bases:

>100_bases
GATTGATTGCTATGGTAGGCTAAGAAGACAAGTGCTAGTTAGAAGGAACAGTGATGCTCAACCCTGAGAAAGTGCTTGAA
ACGTTACACATATTGCGTGA

Product: alpha beta-propellor repeat-containing integrin

Products: NA

Alternate protein names: Alpha Beta-Propellor Repeat-Containing Integrin; PKD Domain-Containing Protein; Quinoprotein; Lipoprotein; PAS/PAC Sensor Signal Transduction Histidine Kinase; FG-GAP Repeat-Containing Protein; VCBS Protein; Polyhydroxyalkanoate Synthesis Repressor PhaR; 5-Nucleotidase

Number of amino acids: Translated: 659; Mature: 658

Protein sequence:

>659_residues
MAFHSDQTLPTMRVARRIIAGLLLLAVVIGLARVGRFVHAQPAQSASLHASDWQAISELLPPNQQAYLKASNTNLGDLFS
SSVAIDGNTIAIGAPNESSSATGINGNQQDNSVISSGAVYIFVRTGTTWSQQAYIKASNPDFNDLFGHSVALSGNTLVVG
AVNESSEATGINGNQTDNSAMNAGAVYVFVRSGTTWSQQSYLKASNAEAFDQFGWIVALDGNTLAVGANLESSNATGVNG
NQADNNAVRSGAAYIFVRTGTTWSQQAYLKASNTEANDNFAMALDLSGDRLVVGAVNEDSAATGINGDQSNNDAASAGAA
YVFVRSGTTWSQQAYLKASNTEANDFFGESVTIDDSTVAVGAWWEDSSATGVNGDQNNNNTTFSGAAYVYSFDGMSWSQQ
AYIKASNTDTENYFGHALVLRGDRLIVSAYADDSAAIGINGDQQNADAGGSGAAFVFARVGTVWSQQHYLKASNTGVEDT
FGYTMATDGLSLVVGARYEDSNATGIDGNQADNSADLSGAAYVFSLAQSVAYLPLVFKRMTTLIATINPNTIPIRPITVQ
GETFLSSSFILPSDLPATGTYYLSASPTSVMPSLVDDAVVLSANSTQIFRHEYSTPNSAIVTVPYATLAPYAGQSITVQF
NDVYGSVVQASPMYLIWVP

Sequences:

>Translated_659_residues
MAFHSDQTLPTMRVARRIIAGLLLLAVVIGLARVGRFVHAQPAQSASLHASDWQAISELLPPNQQAYLKASNTNLGDLFS
SSVAIDGNTIAIGAPNESSSATGINGNQQDNSVISSGAVYIFVRTGTTWSQQAYIKASNPDFNDLFGHSVALSGNTLVVG
AVNESSEATGINGNQTDNSAMNAGAVYVFVRSGTTWSQQSYLKASNAEAFDQFGWIVALDGNTLAVGANLESSNATGVNG
NQADNNAVRSGAAYIFVRTGTTWSQQAYLKASNTEANDNFAMALDLSGDRLVVGAVNEDSAATGINGDQSNNDAASAGAA
YVFVRSGTTWSQQAYLKASNTEANDFFGESVTIDDSTVAVGAWWEDSSATGVNGDQNNNNTTFSGAAYVYSFDGMSWSQQ
AYIKASNTDTENYFGHALVLRGDRLIVSAYADDSAAIGINGDQQNADAGGSGAAFVFARVGTVWSQQHYLKASNTGVEDT
FGYTMATDGLSLVVGARYEDSNATGIDGNQADNSADLSGAAYVFSLAQSVAYLPLVFKRMTTLIATINPNTIPIRPITVQ
GETFLSSSFILPSDLPATGTYYLSASPTSVMPSLVDDAVVLSANSTQIFRHEYSTPNSAIVTVPYATLAPYAGQSITVQF
NDVYGSVVQASPMYLIWVP
>Mature_658_residues
AFHSDQTLPTMRVARRIIAGLLLLAVVIGLARVGRFVHAQPAQSASLHASDWQAISELLPPNQQAYLKASNTNLGDLFSS
SVAIDGNTIAIGAPNESSSATGINGNQQDNSVISSGAVYIFVRTGTTWSQQAYIKASNPDFNDLFGHSVALSGNTLVVGA
VNESSEATGINGNQTDNSAMNAGAVYVFVRSGTTWSQQSYLKASNAEAFDQFGWIVALDGNTLAVGANLESSNATGVNGN
QADNNAVRSGAAYIFVRTGTTWSQQAYLKASNTEANDNFAMALDLSGDRLVVGAVNEDSAATGINGDQSNNDAASAGAAY
VFVRSGTTWSQQAYLKASNTEANDFFGESVTIDDSTVAVGAWWEDSSATGVNGDQNNNNTTFSGAAYVYSFDGMSWSQQA
YIKASNTDTENYFGHALVLRGDRLIVSAYADDSAAIGINGDQQNADAGGSGAAFVFARVGTVWSQQHYLKASNTGVEDTF
GYTMATDGLSLVVGARYEDSNATGIDGNQADNSADLSGAAYVFSLAQSVAYLPLVFKRMTTLIATINPNTIPIRPITVQG
ETFLSSSFILPSDLPATGTYYLSASPTSVMPSLVDDAVVLSANSTQIFRHEYSTPNSAIVTVPYATLAPYAGQSITVQFN
DVYGSVVQASPMYLIWVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69291; Mature: 69160

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFHSDQTLPTMRVARRIIAGLLLLAVVIGLARVGRFVHAQPAQSASLHASDWQAISELL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHC
PPNQQAYLKASNTNLGDLFSSSVAIDGNTIAIGAPNESSSATGINGNQQDNSVISSGAVY
CCCCCEEEEECCCCHHHHHCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCEECCCEEE
IFVRTGTTWSQQAYIKASNPDFNDLFGHSVALSGNTLVVGAVNESSEATGINGNQTDNSA
EEEECCCCCCCEEEEEECCCCHHHHCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCC
MNAGAVYVFVRSGTTWSQQSYLKASNAEAFDQFGWIVALDGNTLAVGANLESSNATGVNG
CCCCEEEEEEECCCCCCCHHHHCCCCCCHHHHCCEEEEECCCEEEEECCCCCCCCCCCCC
NQADNNAVRSGAAYIFVRTGTTWSQQAYLKASNTEANDNFAMALDLSGDRLVVGAVNEDS
CCCCCCHHCCCEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCC
AATGINGDQSNNDAASAGAAYVFVRSGTTWSQQAYLKASNTEANDFFGESVTIDDSTVAV
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHCCCEEEECCCEEEE
GAWWEDSSATGVNGDQNNNNTTFSGAAYVYSFDGMSWSQQAYIKASNTDTENYFGHALVL
EEEECCCCCCCCCCCCCCCCCEEECEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEE
RGDRLIVSAYADDSAAIGINGDQQNADAGGSGAAFVFARVGTVWSQQHYLKASNTGVEDT
ECCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEEHHHHHCCCEEEEECCCCCCCC
FGYTMATDGLSLVVGARYEDSNATGIDGNQADNSADLSGAAYVFSLAQSVAYLPLVFKRM
CCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TTLIATINPNTIPIRPITVQGETFLSSSFILPSDLPATGTYYLSASPTSVMPSLVDDAVV
HEEEEEECCCEEEEEEEEECCCCEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCEEE
LSANSTQIFRHEYSTPNSAIVTVPYATLAPYAGQSITVQFNDVYGSVVQASPMYLIWVP
EECCCCEEEEEECCCCCCEEEEECHHHHCCCCCCEEEEEEECCCCCEEECCCEEEEEEC
>Mature Secondary Structure 
AFHSDQTLPTMRVARRIIAGLLLLAVVIGLARVGRFVHAQPAQSASLHASDWQAISELL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHC
PPNQQAYLKASNTNLGDLFSSSVAIDGNTIAIGAPNESSSATGINGNQQDNSVISSGAVY
CCCCCEEEEECCCCHHHHHCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCEECCCEEE
IFVRTGTTWSQQAYIKASNPDFNDLFGHSVALSGNTLVVGAVNESSEATGINGNQTDNSA
EEEECCCCCCCEEEEEECCCCHHHHCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCC
MNAGAVYVFVRSGTTWSQQSYLKASNAEAFDQFGWIVALDGNTLAVGANLESSNATGVNG
CCCCEEEEEEECCCCCCCHHHHCCCCCCHHHHCCEEEEECCCEEEEECCCCCCCCCCCCC
NQADNNAVRSGAAYIFVRTGTTWSQQAYLKASNTEANDNFAMALDLSGDRLVVGAVNEDS
CCCCCCHHCCCEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCC
AATGINGDQSNNDAASAGAAYVFVRSGTTWSQQAYLKASNTEANDFFGESVTIDDSTVAV
CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHCCCEEEECCCEEEE
GAWWEDSSATGVNGDQNNNNTTFSGAAYVYSFDGMSWSQQAYIKASNTDTENYFGHALVL
EEEECCCCCCCCCCCCCCCCCEEECEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEE
RGDRLIVSAYADDSAAIGINGDQQNADAGGSGAAFVFARVGTVWSQQHYLKASNTGVEDT
ECCEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEEHHHHHCCCEEEEECCCCCCCC
FGYTMATDGLSLVVGARYEDSNATGIDGNQADNSADLSGAAYVFSLAQSVAYLPLVFKRM
CCEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TTLIATINPNTIPIRPITVQGETFLSSSFILPSDLPATGTYYLSASPTSVMPSLVDDAVV
HEEEEEECCCEEEEEEEEECCCCEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCEEE
LSANSTQIFRHEYSTPNSAIVTVPYATLAPYAGQSITVQFNDVYGSVVQASPMYLIWVP
EECCCCEEEEEECCCCCCEEEEECHHHHCCCCCCEEEEEEECCCCCEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA