Click here to switch to the map view.

The map label for this gene is 159898907

Identifier: 159898907

GI number: 159898907

Start: 3039256

End: 3040257

Strand: Direct

Name: 159898907

Synonym: Haur_2386

Alternate gene names: NA

Gene position: 3039256-3040257 (Clockwise)

Preceding gene: 159898906

Following gene: 159898908

Centisome position: 47.89

GC content: 51.2

Gene sequence:

>1002_bases
ATGCCAACTCTCTATTTAAACGAGCAAGGCACCCGTTTGGGCAAAAAAGATGAGCGCTTGATCATCCTACGTGGTCAAGA
GTTGATCAACGATATTCCAGTAATCAAAGTTGATCGAGTCATTGTGATGGGTCAAGGGGTGCAGGTATCGCATGCCGCAA
TTGTATTTCTGGCCCAACGAGGAATTCCCTTAATTTTTACGACCCAATCGGGTGGCTCACAGAAGGCCATGGTTTCGGCG
GGCTTGGGTAATAATGCGGCTTTGCGCCTCGCCCAATGCCGCATTGTCGATAACCCCCATTTGGCGGTTCCCTTGGTGCA
GGCGATTGTAGTTGGCAAAGTTGCCAATCAAATTCAACTGTTGGAGCGTTATGGCAGCGATTGGGGTGGGATGGGGCTAC
GTGCCAAACAAACCATGCAGCATGTCATTCAACAAACGCAACACATGCCCGATATCGAGCAATTGCGTGGCCTCGAAGGA
GCTGGGGCAGCGGCCTATTGGGGCACATGGAGTGCTGTTTTCAAAACTGCCTGGGGTTTTGCGGGCCGCGCTTATCGCCC
AACCCCCGACCCATTGAATGCCTTGTTGAGTTTTGGCTACACACTGCTACTCAACGATTTGATGACTGCCGTGCAAGCCC
TCAGCTTTGATCCCTATCTCGGCGTGTTTCATACTGTGCAGTTTGGGCGACCCTCGTTGGCGCTCGATCTCGAGGAGGAA
TTTCGGCCATGCATCGTTGATCGTATGGTGTTGGATGTGCTTGATGCTGGTTTATTGCAAATGAGCAATTTCAGCCGCAC
TGAAAAAGGCTTTTTGCTCAACGATCGGGCGCGTAAAAGCTTTATTCAAGCCTATGAGCAACGCATGCAAACCCCGATTC
GCTATCAAGGCACTGGTAACAACGAGCCAATGCGACGGGTACTTTTACTACAAACTCAGCATTTAGCGCGGGTTCTGCAA
GGCGAAGAGCCGCGCTATCAGCCCTATGTTTGGCGTGATTGA

Upstream 100 bases:

>100_bases
GCAAACCTCGTACATAAAATCTGACAAGCAGTTTGATAATGAACCTGTATCTTGTACCCCTCGCCAATATTGAAGCCAGC
GTTAAAAAGGATCGTCAGCC

Downstream 100 bases:

>100_bases
GCGCTAGGGCATCGTTAAATCCCTCACCCCCAACCCCTCTCCCACTGCGGCAGGCGAGGGGCGTTCCAAGCGTCATGATC
GGATGGTTCCCCCTCGCTCG

Product: CRISPR-associated Cas1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MPTLYLNEQGTRLGKKDERLIILRGQELINDIPVIKVDRVIVMGQGVQVSHAAIVFLAQRGIPLIFTTQSGGSQKAMVSA
GLGNNAALRLAQCRIVDNPHLAVPLVQAIVVGKVANQIQLLERYGSDWGGMGLRAKQTMQHVIQQTQHMPDIEQLRGLEG
AGAAAYWGTWSAVFKTAWGFAGRAYRPTPDPLNALLSFGYTLLLNDLMTAVQALSFDPYLGVFHTVQFGRPSLALDLEEE
FRPCIVDRMVLDVLDAGLLQMSNFSRTEKGFLLNDRARKSFIQAYEQRMQTPIRYQGTGNNEPMRRVLLLQTQHLARVLQ
GEEPRYQPYVWRD

Sequences:

>Translated_333_residues
MPTLYLNEQGTRLGKKDERLIILRGQELINDIPVIKVDRVIVMGQGVQVSHAAIVFLAQRGIPLIFTTQSGGSQKAMVSA
GLGNNAALRLAQCRIVDNPHLAVPLVQAIVVGKVANQIQLLERYGSDWGGMGLRAKQTMQHVIQQTQHMPDIEQLRGLEG
AGAAAYWGTWSAVFKTAWGFAGRAYRPTPDPLNALLSFGYTLLLNDLMTAVQALSFDPYLGVFHTVQFGRPSLALDLEEE
FRPCIVDRMVLDVLDAGLLQMSNFSRTEKGFLLNDRARKSFIQAYEQRMQTPIRYQGTGNNEPMRRVLLLQTQHLARVLQ
GEEPRYQPYVWRD
>Mature_332_residues
PTLYLNEQGTRLGKKDERLIILRGQELINDIPVIKVDRVIVMGQGVQVSHAAIVFLAQRGIPLIFTTQSGGSQKAMVSAG
LGNNAALRLAQCRIVDNPHLAVPLVQAIVVGKVANQIQLLERYGSDWGGMGLRAKQTMQHVIQQTQHMPDIEQLRGLEGA
GAAAYWGTWSAVFKTAWGFAGRAYRPTPDPLNALLSFGYTLLLNDLMTAVQALSFDPYLGVFHTVQFGRPSLALDLEEEF
RPCIVDRMVLDVLDAGLLQMSNFSRTEKGFLLNDRARKSFIQAYEQRMQTPIRYQGTGNNEPMRRVLLLQTQHLARVLQG
EEPRYQPYVWRD

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 37272; Mature: 37141

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLYLNEQGTRLGKKDERLIILRGQELINDIPVIKVDRVIVMGQGVQVSHAAIVFLAQR
CCEEEECCCCCCCCCCCCEEEEEECHHHHCCCCEEEECEEEEECCCCEEHHHHHEEEHHC
GIPLIFTTQSGGSQKAMVSAGLGNNAALRLAQCRIVDNPHLAVPLVQAIVVGKVANQIQL
CCCEEEEECCCCCCEEEEECCCCCCHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LERYGSDWGGMGLRAKQTMQHVIQQTQHMPDIEQLRGLEGAGAAAYWGTWSAVFKTAWGF
HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
AGRAYRPTPDPLNALLSFGYTLLLNDLMTAVQALSFDPYLGVFHTVQFGRPSLALDLEEE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECHHH
FRPCIVDRMVLDVLDAGLLQMSNFSRTEKGFLLNDRARKSFIQAYEQRMQTPIRYQGTGN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHCCCEEEECCCC
NEPMRRVLLLQTQHLARVLQGEEPRYQPYVWRD
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTLYLNEQGTRLGKKDERLIILRGQELINDIPVIKVDRVIVMGQGVQVSHAAIVFLAQR
CEEEECCCCCCCCCCCCEEEEEECHHHHCCCCEEEECEEEEECCCCEEHHHHHEEEHHC
GIPLIFTTQSGGSQKAMVSAGLGNNAALRLAQCRIVDNPHLAVPLVQAIVVGKVANQIQL
CCCEEEEECCCCCCEEEEECCCCCCHHEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
LERYGSDWGGMGLRAKQTMQHVIQQTQHMPDIEQLRGLEGAGAAAYWGTWSAVFKTAWGF
HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCC
AGRAYRPTPDPLNALLSFGYTLLLNDLMTAVQALSFDPYLGVFHTVQFGRPSLALDLEEE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECHHH
FRPCIVDRMVLDVLDAGLLQMSNFSRTEKGFLLNDRARKSFIQAYEQRMQTPIRYQGTGN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHHHHCCCEEEECCCC
NEPMRRVLLLQTQHLARVLQGEEPRYQPYVWRD
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]