Click here to switch to the map view.

The map label for this gene is 159898908

Identifier: 159898908

GI number: 159898908

Start: 3040529

End: 3040807

Strand: Direct

Name: 159898908

Synonym: Haur_2387

Alternate gene names: NA

Gene position: 3040529-3040807 (Clockwise)

Preceding gene: 159898907

Following gene: 159898910

Centisome position: 47.91

GC content: 48.75

Gene sequence:

>279_bases
ATGTTCATCTTAATTAGTTACGATATTCCCCACGATAAACGGCGGAGTAAAATCGCCAAAACCCTCGAAAATTTTGGCAA
GCGCGTGCAATATAGCGTATTTGAATGCCAACTGACCGATAGCCAATTGGCCGATGTGCGGGGGCGGCTGACTGCGTTGG
TTGTGCCCAACGAGGATAGCATTCGCTTTTATTCGTTGCCCAAGGATGCAGTGACCGCGATGTTAATTCTTGGGCATGGG
GTGGTAACCCACGACCCAAGCTTCTATTGGACTGATTAG

Upstream 100 bases:

>100_bases
ACCTACCCTTATACGGCAGGAGTTGGGGGTGAGGGCATGAAATTCATGTGCTTTGTGTCCTTCATGGAGCATTTTGCATT
GACTAGCCGAAGGATCAAGT

Downstream 100 bases:

>100_bases
CTCGAATTCAGGTCGATTGCCAGAATCCGATCAAAGCGAAAAGCCCGCTCCTGTTGGCGTAATTCACACCAGCCGCGCAT
CCCGGTGCTGGTCAGCTCGA

Product: CRISPR-associated Cas2 family protein

Products: NA

Alternate protein names: CRISPR-Associated Protein Cas2 Family

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MFILISYDIPHDKRRSKIAKTLENFGKRVQYSVFECQLTDSQLADVRGRLTALVVPNEDSIRFYSLPKDAVTAMLILGHG
VVTHDPSFYWTD

Sequences:

>Translated_92_residues
MFILISYDIPHDKRRSKIAKTLENFGKRVQYSVFECQLTDSQLADVRGRLTALVVPNEDSIRFYSLPKDAVTAMLILGHG
VVTHDPSFYWTD
>Mature_92_residues
MFILISYDIPHDKRRSKIAKTLENFGKRVQYSVFECQLTDSQLADVRGRLTALVVPNEDSIRFYSLPKDAVTAMLILGHG
VVTHDPSFYWTD

Specific function: Unknown

COG id: COG1343

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10547; Mature: 10547

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFILISYDIPHDKRRSKIAKTLENFGKRVQYSVFECQLTDSQLADVRGRLTALVVPNEDS
CEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHCCCCEEEEEECCCCC
IRFYSLPKDAVTAMLILGHGVVTHDPSFYWTD
EEEEECCHHHHHHHHHHCCCEEECCCCEEECC
>Mature Secondary Structure
MFILISYDIPHDKRRSKIAKTLENFGKRVQYSVFECQLTDSQLADVRGRLTALVVPNEDS
CEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHCCCCEEEEEECCCCC
IRFYSLPKDAVTAMLILGHGVVTHDPSFYWTD
EEEEECCHHHHHHHHHHCCCEEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA