Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898774

Identifier: 159898774

GI number: 159898774

Start: 2873917

End: 2875770

Strand: Direct

Name: 159898774

Synonym: Haur_2253

Alternate gene names: NA

Gene position: 2873917-2875770 (Clockwise)

Preceding gene: 159898765

Following gene: 159898776

Centisome position: 45.28

GC content: 52.8

Gene sequence:

>1854_bases
ATGAAACCATTTACCAGAGCACTCATCACCAGTATGCTGGTGGCAATTTTAGCAGCCTGTGCAAATAGCCAAACGACGAG
CAACAGCAACCCGACTTCGAGCAACAGTCAAGCGGTGGTCAGTGCAACGAGCGCGACAACGACCAGCCCAACCGTGGTCG
TGCCAACCGTCGAATCAATCGATGAGGCACTAGCTACCAAAGCTACCCCCCACGATACCTCAGCAGATTTGGCTTGGGAT
ACGGCGGAGTTGGTCGAAATTAAACTGAGTGATAGCACCATCACCGCCAGCAGCCCCAATGTCAAGGTTGAGGGCACGAC
CGTCACAATTAGCGCCGCCGGAACCTACCAATTAAGTGGCAGTTTGAGCGATGGCCAAATTATCGTTGATACTACTGATA
ACGATTTAGTGCGCTTAATCTTGAATGGTGTAACGATTCATAGCTCAACCAGTGCTCCCATCGCGATTATGCAAGCCGAA
CAAGTGGCGGTAATTTTGGCCGATGGTAGCCAAAATACGCTTTCAGATACAATTGATGCCTCAGCCAATGCTACGACCGA
AGAAGATTTGCCCAACGCCACGCTGTATAGCAAAGCCGATTTAGCGATTGATGGCACTGGCAGTCTGACGATTCAGGCCA
ACGGCAACGACGGCATCACTGGCAAAGATGGCTTGGTGATCAACAGTGGCACGATCGATATTAGCGCAGTTGATGACGGC
TTGCGCGGCAAAGATTATCTGGTGGTCAACGGCGGCACAATCAGCATTAATGCTCAAGGCGACGGCCTAACCGCTGATAA
CGAAGAAGATCCGACCAAAGGCTATATTTCGATCACAGGTGGTACATTCACGATCAACGCTGGCGGCGATGGCCTCAGTG
CCGTCACCGATCTCTTGATCGACACTGGCGATTTGACGATTAGCGCTGGTGGCGGCAGTAGTGCTAGTGTGAGCGCCGAT
GCTTCAGCCAAAGGCTTGAAAGCTGGCCAAAATTTAGTGATTGCCGATGGCACGATCACGATTGACGCTGCTGAAGATGC
GCTGCATTCCGATAGCAATGTCACGATCAATGCTGGCACAATCAACCTCGCCGCAGGCGATGATGGTGTGCATGCCGATG
CAAACCTCACAATCAACGGCGGCGATCTGGCAATTAGCACCTCGTATGAAGGCCTTGAAAGCGCCGTCATCACGATCAAC
GATGGCGCAATTAGCCTTGTAGCCCAAGATGATGGGGTGAATGTGGCCGGTGGCGATGGTTCGAGTATGCAGGGTGGCGG
CATGGGTCGGCCCAATCGCAACGATAGCTTTGCCGCTGGCACCTACTTCTTGTATATCAACGGCGGTACATTGGTGGTCA
ATGCTGCTGGCGACGGCTTAGATGCCAATGGTTCGATTGAGATGAACGGTGGTTTGGTGTTAGTTCACGGCCCAACCGAG
CAAATGAACGGCGCATTGGATTATGATGGTGGTTTCGCGTTGAATGGTGGGATTTTAGTTGCTACTGGCAGCGCGGGCAT
GGCCCAAGCACCCGACACCAGTTCAACTCAAGCCTCAGTGCTGATCAACTATAGCTCGGCTCAGGCTGCTGGCAACTTGG
TGCAAATTCTTGATCAATCAGGCAAGGCGATTGTGAGCTTTACGCCCAGCAAACAATACCAAACCTTGGTCTTCTCATCG
CCAGAGCTGCAACAAGGCGCAAGCTACACAATCAATAGCGGTGGCTCACTGCAAACGCACTCGGCCAGTGGCCTCTCGTC
GGAAACAGCCAATGCAGGCGGCACAGCTTACGCCAGCTTCAGCGTCAGCGATATCGTGACCCAAGTTGGCCAACGCATGG
GACGACAACGCTAA

Upstream 100 bases:

>100_bases
AGCCCCCTCTCACACAAGTGAGCGAGGGGGAAGGACTCAAACAACATCGTAATCAGGTAAGGGAATCGACTATGTTACAG
ATTTTATTGGGAGCTTTCGC

Downstream 100 bases:

>100_bases
AAGTCAAAGTCAAAAGGCAGAAGTCAAAAATCAAAAGAGTTACCAAGCGTAAAATTTAACGCAGTGGCACAGAGCAAGCA
TATTCTCTGCGCCGCTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 617; Mature: 617

Protein sequence:

>617_residues
MKPFTRALITSMLVAILAACANSQTTSNSNPTSSNSQAVVSATSATTTSPTVVVPTVESIDEALATKATPHDTSADLAWD
TAELVEIKLSDSTITASSPNVKVEGTTVTISAAGTYQLSGSLSDGQIIVDTTDNDLVRLILNGVTIHSSTSAPIAIMQAE
QVAVILADGSQNTLSDTIDASANATTEEDLPNATLYSKADLAIDGTGSLTIQANGNDGITGKDGLVINSGTIDISAVDDG
LRGKDYLVVNGGTISINAQGDGLTADNEEDPTKGYISITGGTFTINAGGDGLSAVTDLLIDTGDLTISAGGGSSASVSAD
ASAKGLKAGQNLVIADGTITIDAAEDALHSDSNVTINAGTINLAAGDDGVHADANLTINGGDLAISTSYEGLESAVITIN
DGAISLVAQDDGVNVAGGDGSSMQGGGMGRPNRNDSFAAGTYFLYINGGTLVVNAAGDGLDANGSIEMNGGLVLVHGPTE
QMNGALDYDGGFALNGGILVATGSAGMAQAPDTSSTQASVLINYSSAQAAGNLVQILDQSGKAIVSFTPSKQYQTLVFSS
PELQQGASYTINSGGSLQTHSASGLSSETANAGGTAYASFSVSDIVTQVGQRMGRQR

Sequences:

>Translated_617_residues
MKPFTRALITSMLVAILAACANSQTTSNSNPTSSNSQAVVSATSATTTSPTVVVPTVESIDEALATKATPHDTSADLAWD
TAELVEIKLSDSTITASSPNVKVEGTTVTISAAGTYQLSGSLSDGQIIVDTTDNDLVRLILNGVTIHSSTSAPIAIMQAE
QVAVILADGSQNTLSDTIDASANATTEEDLPNATLYSKADLAIDGTGSLTIQANGNDGITGKDGLVINSGTIDISAVDDG
LRGKDYLVVNGGTISINAQGDGLTADNEEDPTKGYISITGGTFTINAGGDGLSAVTDLLIDTGDLTISAGGGSSASVSAD
ASAKGLKAGQNLVIADGTITIDAAEDALHSDSNVTINAGTINLAAGDDGVHADANLTINGGDLAISTSYEGLESAVITIN
DGAISLVAQDDGVNVAGGDGSSMQGGGMGRPNRNDSFAAGTYFLYINGGTLVVNAAGDGLDANGSIEMNGGLVLVHGPTE
QMNGALDYDGGFALNGGILVATGSAGMAQAPDTSSTQASVLINYSSAQAAGNLVQILDQSGKAIVSFTPSKQYQTLVFSS
PELQQGASYTINSGGSLQTHSASGLSSETANAGGTAYASFSVSDIVTQVGQRMGRQR
>Mature_617_residues
MKPFTRALITSMLVAILAACANSQTTSNSNPTSSNSQAVVSATSATTTSPTVVVPTVESIDEALATKATPHDTSADLAWD
TAELVEIKLSDSTITASSPNVKVEGTTVTISAAGTYQLSGSLSDGQIIVDTTDNDLVRLILNGVTIHSSTSAPIAIMQAE
QVAVILADGSQNTLSDTIDASANATTEEDLPNATLYSKADLAIDGTGSLTIQANGNDGITGKDGLVINSGTIDISAVDDG
LRGKDYLVVNGGTISINAQGDGLTADNEEDPTKGYISITGGTFTINAGGDGLSAVTDLLIDTGDLTISAGGGSSASVSAD
ASAKGLKAGQNLVIADGTITIDAAEDALHSDSNVTINAGTINLAAGDDGVHADANLTINGGDLAISTSYEGLESAVITIN
DGAISLVAQDDGVNVAGGDGSSMQGGGMGRPNRNDSFAAGTYFLYINGGTLVVNAAGDGLDANGSIEMNGGLVLVHGPTE
QMNGALDYDGGFALNGGILVATGSAGMAQAPDTSSTQASVLINYSSAQAAGNLVQILDQSGKAIVSFTPSKQYQTLVFSS
PELQQGASYTINSGGSLQTHSASGLSSETANAGGTAYASFSVSDIVTQVGQRMGRQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61715; Mature: 61715

Theoretical pI: Translated: 3.77; Mature: 3.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPFTRALITSMLVAILAACANSQTTSNSNPTSSNSQAVVSATSATTTSPTVVVPTVESI
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECHHHH
DEALATKATPHDTSADLAWDTAELVEIKLSDSTITASSPNVKVEGTTVTISAAGTYQLSG
HHHHHCCCCCCCCCCCEEECCEEEEEEEECCCEEECCCCCEEEEEEEEEEEECCEEEEEC
SLSDGQIIVDTTDNDLVRLILNGVTIHSSTSAPIAIMQAEQVAVILADGSQNTLSDTIDA
CCCCCEEEEECCCCCEEEEEEECEEEECCCCCCEEEEEECEEEEEEECCCCCCHHHHCCC
SANATTEEDLPNATLYSKADLAIDGTGSLTIQANGNDGITGKDGLVINSGTIDISAVDDG
CCCCCCHHCCCCCEEEECCCEEEECCCEEEEEECCCCCCCCCCCEEEECCEEEEEECCCC
LRGKDYLVVNGGTISINAQGDGLTADNEEDPTKGYISITGGTFTINAGGDGLSAVTDLLI
CCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCHHHHHHHHE
DTGDLTISAGGGSSASVSADASAKGLKAGQNLVIADGTITIDAAEDALHSDSNVTINAGT
ECCCEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCEEEEECCHHHHCCCCCEEEECCE
INLAAGDDGVHADANLTINGGDLAISTSYEGLESAVITINDGAISLVAQDDGVNVAGGDG
EEEEECCCCCCCCCEEEEECCCEEEEECCCCCCEEEEEEECCEEEEEEECCCCEEECCCC
SSMQGGGMGRPNRNDSFAAGTYFLYINGGTLVVNAAGDGLDANGSIEMNGGLVLVHGPTE
CCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEEECCCCCCCCCCEEEECCCEEEEECCHH
QMNGALDYDGGFALNGGILVATGSAGMAQAPDTSSTQASVLINYSSAQAAGNLVQILDQS
HHCCEEECCCCEEECCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHCCHHHEECCCC
GKAIVSFTPSKQYQTLVFSSPELQQGASYTINSGGSLQTHSASGLSSETANAGGTAYASF
CCEEEEECCCCCEEEEEECCCCHHCCCCEEECCCCCEEECCCCCCCCCCCCCCCEEEEEE
SVSDIVTQVGQRMGRQR
EHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKPFTRALITSMLVAILAACANSQTTSNSNPTSSNSQAVVSATSATTTSPTVVVPTVESI
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECHHHH
DEALATKATPHDTSADLAWDTAELVEIKLSDSTITASSPNVKVEGTTVTISAAGTYQLSG
HHHHHCCCCCCCCCCCEEECCEEEEEEEECCCEEECCCCCEEEEEEEEEEEECCEEEEEC
SLSDGQIIVDTTDNDLVRLILNGVTIHSSTSAPIAIMQAEQVAVILADGSQNTLSDTIDA
CCCCCEEEEECCCCCEEEEEEECEEEECCCCCCEEEEEECEEEEEEECCCCCCHHHHCCC
SANATTEEDLPNATLYSKADLAIDGTGSLTIQANGNDGITGKDGLVINSGTIDISAVDDG
CCCCCCHHCCCCCEEEECCCEEEECCCEEEEEECCCCCCCCCCCEEEECCEEEEEECCCC
LRGKDYLVVNGGTISINAQGDGLTADNEEDPTKGYISITGGTFTINAGGDGLSAVTDLLI
CCCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCEEEEECCEEEEECCCCCHHHHHHHHE
DTGDLTISAGGGSSASVSADASAKGLKAGQNLVIADGTITIDAAEDALHSDSNVTINAGT
ECCCEEEECCCCCCCEEECCCCCCCCCCCCEEEEECCEEEEECCHHHHCCCCCEEEECCE
INLAAGDDGVHADANLTINGGDLAISTSYEGLESAVITINDGAISLVAQDDGVNVAGGDG
EEEEECCCCCCCCCEEEEECCCEEEEECCCCCCEEEEEEECCEEEEEEECCCCEEECCCC
SSMQGGGMGRPNRNDSFAAGTYFLYINGGTLVVNAAGDGLDANGSIEMNGGLVLVHGPTE
CCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEEECCCCCCCCCCEEEECCCEEEEECCHH
QMNGALDYDGGFALNGGILVATGSAGMAQAPDTSSTQASVLINYSSAQAAGNLVQILDQS
HHCCEEECCCCEEECCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHCCHHHEECCCC
GKAIVSFTPSKQYQTLVFSSPELQQGASYTINSGGSLQTHSASGLSSETANAGGTAYASF
CCEEEEECCCCCEEEEEECCCCHHCCCCEEECCCCCEEECCCCCCCCCCCCCCCEEEEEE
SVSDIVTQVGQRMGRQR
EHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA