| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898776
Identifier: 159898776
GI number: 159898776
Start: 2880713
End: 2881849
Strand: Direct
Name: 159898776
Synonym: Haur_2255
Alternate gene names: NA
Gene position: 2880713-2881849 (Clockwise)
Preceding gene: 159898774
Following gene: 159898778
Centisome position: 45.39
GC content: 46.61
Gene sequence:
>1137_bases ATGACCGCAAACAGCAAACATCAAGCTTGGCAAATTGGCCTAATCATCGGTTTTTGGCCGATTGTGCTTTTTGCCCTGTT CAATGATTCGGCTTGGCTCTATGCCCAAAGCTTCAACGGCCAAATCATTAGCAACATCGCCGCGCCGCTCTACTTTGGCT TGATGCTCTATCACTTGCGCCCCGACCAACGCCTGATTGCCTTGGTATTTGTGCCATTTTCGGCGCTCGGCGAATATGTA TTTAGCCTATTGCTTGAGCTTTACAGCTACAAATTTGAGGCAATTCCGATCTATGTGCCGTTTGGTCATGCAATTTTACT TAGCACAGGCCTGTTGATCAGTGAATTGGCCTGGGTTAAACAACGTGAAAAACAGCTACGTTGGAGTCTATTACTTGGTC ATGTCAGTTTGTTTATTGGGGCATTTTTGCTCTTCGATGATAGCTTGAGTTTGCTGTTTGGGCTGGGGTTTAGTCTGATT TTATTGCTCTATCGTGCCCAATTATTACATTTAATTATGGGCTTTTTGGTGCTTTATATCGAGCTATTGGGCACATGGCT TGGCTGTTGGCGCTGGGATCTCAACCCACTCAATGGATTATTGCACACTACCAACCCGCCAGTTGGAGCGTTTGTCTGCT ATGTGATTGCCGATATTATTGTGATTATGAGCTTACGCTGGCTACGCTGGATGCGGGGCTACCGCCGCAACCCGCATGCC AAAGGCTCAGCCGCCTATTACCAGCAAAAACTAGCCTTGACCCAACAAATTTATGCCGAGCAAGGTGGCAAATCGGCCAT TAGCAACGACGATGGTTTTGGTAAAGGCTATGCTTTGGGCACAGTCGGTTTACGTTATGTTGAATTAAATCAAGATTCAG CGGCAATTACCTGTTTTGAGCGTACCCGCCAACTAGCCCAAAGCCGAAATGATCAAGCGATTTTCCATTTGGCGGGCTGG CATCTAGGCCAAATCCTGCTCCAACAAGGCCAAGAACATGAGGCGATGACGTTATTACAAGCTTATGTCAATTATCTTCA AGCTAGCAATTCGACGCAGGCTGAGCATTTTGCAGCACAACTTGCTCAGGCGCAGCCTAATACAAATGATAACTCAAGTT CAGCAGTGTTGCGATAG
Upstream 100 bases:
>100_bases ATCTTCGTGGTTTCAATCCTAGCTCCTGACCCCTAACAACTAATCCCGCATCGCTCAATTCGGCTAAAATATGGCTATCG CCTAGTATGGGAGCCTAGTC
Downstream 100 bases:
>100_bases CACGCGCAGTGTTTGACTCACTTAAACCAACCACGTCGGATGAATTTTGATCTAATTGGCGTTTCAACCAAGCATGACCA TCGCGAAATTCTGGCTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTANSKHQAWQIGLIIGFWPIVLFALFNDSAWLYAQSFNGQIISNIAAPLYFGLMLYHLRPDQRLIALVFVPFSALGEYV FSLLLELYSYKFEAIPIYVPFGHAILLSTGLLISELAWVKQREKQLRWSLLLGHVSLFIGAFLLFDDSLSLLFGLGFSLI LLLYRAQLLHLIMGFLVLYIELLGTWLGCWRWDLNPLNGLLHTTNPPVGAFVCYVIADIIVIMSLRWLRWMRGYRRNPHA KGSAAYYQQKLALTQQIYAEQGGKSAISNDDGFGKGYALGTVGLRYVELNQDSAAITCFERTRQLAQSRNDQAIFHLAGW HLGQILLQQGQEHEAMTLLQAYVNYLQASNSTQAEHFAAQLAQAQPNTNDNSSSAVLR
Sequences:
>Translated_378_residues MTANSKHQAWQIGLIIGFWPIVLFALFNDSAWLYAQSFNGQIISNIAAPLYFGLMLYHLRPDQRLIALVFVPFSALGEYV FSLLLELYSYKFEAIPIYVPFGHAILLSTGLLISELAWVKQREKQLRWSLLLGHVSLFIGAFLLFDDSLSLLFGLGFSLI LLLYRAQLLHLIMGFLVLYIELLGTWLGCWRWDLNPLNGLLHTTNPPVGAFVCYVIADIIVIMSLRWLRWMRGYRRNPHA KGSAAYYQQKLALTQQIYAEQGGKSAISNDDGFGKGYALGTVGLRYVELNQDSAAITCFERTRQLAQSRNDQAIFHLAGW HLGQILLQQGQEHEAMTLLQAYVNYLQASNSTQAEHFAAQLAQAQPNTNDNSSSAVLR >Mature_377_residues TANSKHQAWQIGLIIGFWPIVLFALFNDSAWLYAQSFNGQIISNIAAPLYFGLMLYHLRPDQRLIALVFVPFSALGEYVF SLLLELYSYKFEAIPIYVPFGHAILLSTGLLISELAWVKQREKQLRWSLLLGHVSLFIGAFLLFDDSLSLLFGLGFSLIL LLYRAQLLHLIMGFLVLYIELLGTWLGCWRWDLNPLNGLLHTTNPPVGAFVCYVIADIIVIMSLRWLRWMRGYRRNPHAK GSAAYYQQKLALTQQIYAEQGGKSAISNDDGFGKGYALGTVGLRYVELNQDSAAITCFERTRQLAQSRNDQAIFHLAGWH LGQILLQQGQEHEAMTLLQAYVNYLQASNSTQAEHFAAQLAQAQPNTNDNSSSAVLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42668; Mature: 42537
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANSKHQAWQIGLIIGFWPIVLFALFNDSAWLYAQSFNGQIISNIAAPLYFGLMLYHLR CCCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCC PDQRLIALVFVPFSALGEYVFSLLLELYSYKFEAIPIYVPFGHAILLSTGLLISELAWVK CCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH QREKQLRWSLLLGHVSLFIGAFLLFDDSLSLLFGLGFSLILLLYRAQLLHLIMGFLVLYI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLGTWLGCWRWDLNPLNGLLHTTNPPVGAFVCYVIADIIVIMSLRWLRWMRGYRRNPHA HHHHHHHHHHHCCCCHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KGSAAYYQQKLALTQQIYAEQGGKSAISNDDGFGKGYALGTVGLRYVELNQDSAAITCFE CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHH RTRQLAQSRNDQAIFHLAGWHLGQILLQQGQEHEAMTLLQAYVNYLQASNSTQAEHFAAQ HHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH LAQAQPNTNDNSSSAVLR HHHCCCCCCCCCCCCCCC >Mature Secondary Structure TANSKHQAWQIGLIIGFWPIVLFALFNDSAWLYAQSFNGQIISNIAAPLYFGLMLYHLR CCCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCC PDQRLIALVFVPFSALGEYVFSLLLELYSYKFEAIPIYVPFGHAILLSTGLLISELAWVK CCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHH QREKQLRWSLLLGHVSLFIGAFLLFDDSLSLLFGLGFSLILLLYRAQLLHLIMGFLVLYI HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLGTWLGCWRWDLNPLNGLLHTTNPPVGAFVCYVIADIIVIMSLRWLRWMRGYRRNPHA HHHHHHHHHHHCCCCHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KGSAAYYQQKLALTQQIYAEQGGKSAISNDDGFGKGYALGTVGLRYVELNQDSAAITCFE CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHH RTRQLAQSRNDQAIFHLAGWHLGQILLQQGQEHEAMTLLQAYVNYLQASNSTQAEHFAAQ HHHHHHHCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH LAQAQPNTNDNSSSAVLR HHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA