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The map label for this gene is ythB [H]

Identifier: 159898765

GI number: 159898765

Start: 2861114

End: 2862124

Strand: Direct

Name: ythB [H]

Synonym: Haur_2244

Alternate gene names: 159898765

Gene position: 2861114-2862124 (Clockwise)

Preceding gene: 159898764

Following gene: 159898774

Centisome position: 45.08

GC content: 51.73

Gene sequence:

>1011_bases
ATGCCGCTTGAGGTTGTTGTCGCCGCAATTGGCTTGCTAGGGGTCATTACCTATGCGATTTTGGCAGGCGCTGATTTTGG
CGGTGGGATCTGGGATTTATTGGCGTGGGGGCCGAGGCGCACCCAACAACGCGAAGCAATTGCCCATGCGGTTGGCCCCG
TTTGGGAGGCCAACCATGTGTGGCTGATTTTCATTATTGTCGTGCTGTTTACAGGCTTTCCTACTGCGTTTGCGGCGTTG
AGCATTGGGCTATTCGCACCATTTCATCTCGCGCTATTGGGGATTATCCTGCGGGGCGCGGCTTTTGTGTTTCGAGCCTA
TAGCCCGCAAAAAGAGCAACAACCAAGCCAGAGCAGCCAGCGTTGGGGTACGATTTTTGGCGCAGCCAGCGTTATTACCC
CAGTGATTTTGGGCATGACGCTGAGTGCAGTTTCGGCAGGCCAATTACGGGTAATTGATGGCGTTGTGCAAAGTGAGGGC
ATTGTTTGGATGACCCCATTGGCAATTGCGATGGGGTTATTAGCCTTGGCGTTATGTGCTTATCTCGCCGCCGTCTATAT
GACGATTGAAACGCGCGACGAATTACAGGCTGATTTTCGTCAACGCGCCTTGCTAGCTGGTACAGCGGTGGTTGGTTTAT
CCTTATTAAGTCTGCCATTACTCTATTTCACCGCTCAACATCTATGGGAAGGTTTGATCAGCGTTCGTGCCGCGCCAGTA
TTGACGATTGGTCTACTTGCCGCCTTACTTTCAGGCTGGGCCTTATTGCGTTGGCGCTTTCAACTTGCACGCGGCGCAGC
GATTGTGCAAATTAGCTGTTTGCTAGCAGGCTGGGGCATCGCTCAATATCCCTACATCATTTATCCCGATATCACGTTGG
CCACAGCGTCAGCTCCTCGTGCCACCCTGATTTTTATTTTGGTGGCCTTGCCCTTGGGGTTGTTAATCTTATTGCCATCA
TTGTGGTTTCTGTTCAAGGTGTTTAAAAGTGCACCACGTGAGGATGCATAG

Upstream 100 bases:

>100_bases
TTTAGCTTGCTCTATATTGGCCTTGCAAGTGTACTCGTGTATTTATTACGTCAACTTGCTACGGGCTATCCTGCCGAAAC
TAGCGAAAGTGAGGCAACCC

Downstream 100 bases:

>100_bases
CTTGCATTCTCGTGTGGCATAATCTCTGCTAAACCCTACCACATAATGGCGATTTAAGGCGTGCAGGGGGAATTAAAGCC
CCCTGCATTCCCCTCCGACA

Product: cytochrome bd ubiquinol oxidase subunit II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MPLEVVVAAIGLLGVITYAILAGADFGGGIWDLLAWGPRRTQQREAIAHAVGPVWEANHVWLIFIIVVLFTGFPTAFAAL
SIGLFAPFHLALLGIILRGAAFVFRAYSPQKEQQPSQSSQRWGTIFGAASVITPVILGMTLSAVSAGQLRVIDGVVQSEG
IVWMTPLAIAMGLLALALCAYLAAVYMTIETRDELQADFRQRALLAGTAVVGLSLLSLPLLYFTAQHLWEGLISVRAAPV
LTIGLLAALLSGWALLRWRFQLARGAAIVQISCLLAGWGIAQYPYIIYPDITLATASAPRATLIFILVALPLGLLILLPS
LWFLFKVFKSAPREDA

Sequences:

>Translated_336_residues
MPLEVVVAAIGLLGVITYAILAGADFGGGIWDLLAWGPRRTQQREAIAHAVGPVWEANHVWLIFIIVVLFTGFPTAFAAL
SIGLFAPFHLALLGIILRGAAFVFRAYSPQKEQQPSQSSQRWGTIFGAASVITPVILGMTLSAVSAGQLRVIDGVVQSEG
IVWMTPLAIAMGLLALALCAYLAAVYMTIETRDELQADFRQRALLAGTAVVGLSLLSLPLLYFTAQHLWEGLISVRAAPV
LTIGLLAALLSGWALLRWRFQLARGAAIVQISCLLAGWGIAQYPYIIYPDITLATASAPRATLIFILVALPLGLLILLPS
LWFLFKVFKSAPREDA
>Mature_335_residues
PLEVVVAAIGLLGVITYAILAGADFGGGIWDLLAWGPRRTQQREAIAHAVGPVWEANHVWLIFIIVVLFTGFPTAFAALS
IGLFAPFHLALLGIILRGAAFVFRAYSPQKEQQPSQSSQRWGTIFGAASVITPVILGMTLSAVSAGQLRVIDGVVQSEGI
VWMTPLAIAMGLLALALCAYLAAVYMTIETRDELQADFRQRALLAGTAVVGLSLLSLPLLYFTAQHLWEGLISVRAAPVL
TIGLLAALLSGWALLRWRFQLARGAAIVQISCLLAGWGIAQYPYIIYPDITLATASAPRATLIFILVALPLGLLILLPSL
WFLFKVFKSAPREDA

Specific function: Cytochrome D Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At Low Aeration. [C]

COG id: COG1294

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786954, Length=366, Percent_Identity=23.224043715847, Blast_Score=66, Evalue=4e-12,
Organism=Escherichia coli, GI1787213, Length=379, Percent_Identity=25.8575197889182, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003317 [H]

Pfam domain/function: PF02322 Cyto_ox_2 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 36127; Mature: 35996

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLEVVVAAIGLLGVITYAILAGADFGGGIWDLLAWGPRRTQQREAIAHAVGPVWEANHV
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCH
WLIFIIVVLFTGFPTAFAALSIGLFAPFHLALLGIILRGAAFVFRAYSPQKEQQPSQSSQ
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHH
RWGTIFGAASVITPVILGMTLSAVSAGQLRVIDGVVQSEGIVWMTPLAIAMGLLALALCA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHH
YLAAVYMTIETRDELQADFRQRALLAGTAVVGLSLLSLPLLYFTAQHLWEGLISVRAAPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTIGLLAALLSGWALLRWRFQLARGAAIVQISCLLAGWGIAQYPYIIYPDITLATASAPR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCEEEECCCEEEECCCCH
ATLIFILVALPLGLLILLPSLWFLFKVFKSAPREDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PLEVVVAAIGLLGVITYAILAGADFGGGIWDLLAWGPRRTQQREAIAHAVGPVWEANHV
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCH
WLIFIIVVLFTGFPTAFAALSIGLFAPFHLALLGIILRGAAFVFRAYSPQKEQQPSQSSQ
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHH
RWGTIFGAASVITPVILGMTLSAVSAGQLRVIDGVVQSEGIVWMTPLAIAMGLLALALCA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHH
YLAAVYMTIETRDELQADFRQRALLAGTAVVGLSLLSLPLLYFTAQHLWEGLISVRAAPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTIGLLAALLSGWALLRWRFQLARGAAIVQISCLLAGWGIAQYPYIIYPDITLATASAPR
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCEEEECCCEEEECCCCH
ATLIFILVALPLGLLILLPSLWFLFKVFKSAPREDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]