| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898736
Identifier: 159898736
GI number: 159898736
Start: 2814179
End: 2815711
Strand: Direct
Name: 159898736
Synonym: Haur_2215
Alternate gene names: NA
Gene position: 2814179-2815711 (Clockwise)
Preceding gene: 159898735
Following gene: 159898737
Centisome position: 44.34
GC content: 46.9
Gene sequence:
>1533_bases ATGGATGAACTTGCCCAACATCCTCCAACAGCTGAATTGGCGATTGATAAAATTGACAAAGCTGAATTAATTCGTGCGTT TCAGCAAAAAATGCCAGGCTACGATCCGGCTGTCGTGGCGCAGGCAATTTGTGATCTGCTTGAGCAAAAACCAACTATGA TCGATGGGCAAGCCCTGAGATTAACTATTAATGACCAAACTGCTAACTTAGCCAGCTATAACGTCGTTGGTGGCAACCTC AATCAAACAACCATAACGGTTGTCATGCCAAATCCGATCGCAAGCGCAAACACAGCTAAACTAAAACGTGGCCTGACTCG CCGAATTATTGCGCTAATCGTTGGTTTCATCGGTTTGCTGATGCCTTTACACGCTTCCGATCAATTTCAAGCCTCGCAAC AACCGTCATCACAGAGCATGACAGGCGATGTCAATATTGTGATCGCTGAATTTACCCAGCTTAATGAAGAAATTCCCAAT CAATGGAATGATCTGTTGGCGCAGGATCTTGATAATTTGTATGGAATGAGTAGCTTCAATCGGGTCAAAATTCAGACTGA TCCGCGTTTTATTCCATCGATTGAGGCCGCTCAGCAGCTAGCCCAAACCACAAATGCGCATATGGTGATCTACGGCGATA CCCAATCGAGCAGCACGGGGGCGGTTGTAACGCTGCGTTTTTATGTGATCGATCCACATCGGATTAATATTGGCGAGCTG ATCAATGGCGAACACCAAATTGGCGCTCAACTGCAACTCTCAGAGGCTGATCTTTTAGCAGGTCATTCGTTGTTGGATCT ACCTGATGCATTGATTCTGATTGAATTTACCAAAGCCTTGGTCTACTTAGGGCTTGAGGGAACAACCAATCTTGATGCAG CGCTGGCATCGATCAATCAAGCGCTTGCCGCCGCTGAAATTCACCCAAATATTAAAGGCAAAGAGGTACTTTTATTATTT GCCGCTGTGATCACTACTGAGCAATGTGCGCTCGAAGTCGATGATCACAGCGCTTGTTTTGCCCGCGCCCAGCGCTACCT TGACGCAATTCTCCAGCTTAACCCAGCTTATGGCCGCGCTTACCTTGCCAAAGCCAATATTTTTTATGCCCAAGGCAATT TGTTTCAGGCCATGGAATTCTTTAACCAAGCCAAAGCCTTGCCAGATCAGCCATTTGGCAGCTATATCGAGGAAAAAGCC ACCTTTGGAATCGGCAACGTTTGTACCTTGCAATTGCAATATGTTCAGCAACGGCTTGGTGGAAGTGTAGCCGCAAATAG CGAGGCAACCAAACTAGCAAATTGCGCCTTACAAGCCTATCAAACCCTAATTAATAACTATGATCCAGTGCGGAACGACC CGATTTTGCAAGAACTTACGGCTTGGGCCTACTATTGGCAAGGGGTAGTTTATGTCGAGGCAGGTCAAACCAACGCTGCT CAGTGGTCATTTGAGCAAGCCCAACGTTTAGCCACAAATGCCGATTTGCAGCAGCGCGTCCAACAACGGCTCACCCAAGG AGCAGCCAAATGA
Upstream 100 bases:
>100_bases AAAAATTAATTAGGCTACCAAAGTTGTTTGTAATGGCAGTGATCGTTGCCAAAATAACCATTGCCCTAAAGGTCGTTATT ACTCCGCCGAAAGATTGATT
Downstream 100 bases:
>100_bases AACCACGCTTAGCTACATGGTTGATAGCACTCGGCTGGTTATTAATAGGATGTGGAGCACAAACTCCACCTGGTTCAGAT CAAACAGCTCCAACACCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MDELAQHPPTAELAIDKIDKAELIRAFQQKMPGYDPAVVAQAICDLLEQKPTMIDGQALRLTINDQTANLASYNVVGGNL NQTTITVVMPNPIASANTAKLKRGLTRRIIALIVGFIGLLMPLHASDQFQASQQPSSQSMTGDVNIVIAEFTQLNEEIPN QWNDLLAQDLDNLYGMSSFNRVKIQTDPRFIPSIEAAQQLAQTTNAHMVIYGDTQSSSTGAVVTLRFYVIDPHRINIGEL INGEHQIGAQLQLSEADLLAGHSLLDLPDALILIEFTKALVYLGLEGTTNLDAALASINQALAAAEIHPNIKGKEVLLLF AAVITTEQCALEVDDHSACFARAQRYLDAILQLNPAYGRAYLAKANIFYAQGNLFQAMEFFNQAKALPDQPFGSYIEEKA TFGIGNVCTLQLQYVQQRLGGSVAANSEATKLANCALQAYQTLINNYDPVRNDPILQELTAWAYYWQGVVYVEAGQTNAA QWSFEQAQRLATNADLQQRVQQRLTQGAAK
Sequences:
>Translated_510_residues MDELAQHPPTAELAIDKIDKAELIRAFQQKMPGYDPAVVAQAICDLLEQKPTMIDGQALRLTINDQTANLASYNVVGGNL NQTTITVVMPNPIASANTAKLKRGLTRRIIALIVGFIGLLMPLHASDQFQASQQPSSQSMTGDVNIVIAEFTQLNEEIPN QWNDLLAQDLDNLYGMSSFNRVKIQTDPRFIPSIEAAQQLAQTTNAHMVIYGDTQSSSTGAVVTLRFYVIDPHRINIGEL INGEHQIGAQLQLSEADLLAGHSLLDLPDALILIEFTKALVYLGLEGTTNLDAALASINQALAAAEIHPNIKGKEVLLLF AAVITTEQCALEVDDHSACFARAQRYLDAILQLNPAYGRAYLAKANIFYAQGNLFQAMEFFNQAKALPDQPFGSYIEEKA TFGIGNVCTLQLQYVQQRLGGSVAANSEATKLANCALQAYQTLINNYDPVRNDPILQELTAWAYYWQGVVYVEAGQTNAA QWSFEQAQRLATNADLQQRVQQRLTQGAAK >Mature_510_residues MDELAQHPPTAELAIDKIDKAELIRAFQQKMPGYDPAVVAQAICDLLEQKPTMIDGQALRLTINDQTANLASYNVVGGNL NQTTITVVMPNPIASANTAKLKRGLTRRIIALIVGFIGLLMPLHASDQFQASQQPSSQSMTGDVNIVIAEFTQLNEEIPN QWNDLLAQDLDNLYGMSSFNRVKIQTDPRFIPSIEAAQQLAQTTNAHMVIYGDTQSSSTGAVVTLRFYVIDPHRINIGEL INGEHQIGAQLQLSEADLLAGHSLLDLPDALILIEFTKALVYLGLEGTTNLDAALASINQALAAAEIHPNIKGKEVLLLF AAVITTEQCALEVDDHSACFARAQRYLDAILQLNPAYGRAYLAKANIFYAQGNLFQAMEFFNQAKALPDQPFGSYIEEKA TFGIGNVCTLQLQYVQQRLGGSVAANSEATKLANCALQAYQTLINNYDPVRNDPILQELTAWAYYWQGVVYVEAGQTNAA QWSFEQAQRLATNADLQQRVQQRLTQGAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55880; Mature: 55880
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELAQHPPTAELAIDKIDKAELIRAFQQKMPGYDPAVVAQAICDLLEQKPTMIDGQALR CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCCEEE LTINDQTANLASYNVVGGNLNQTTITVVMPNPIASANTAKLKRGLTRRIIALIVGFIGLL EEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MPLHASDQFQASQQPSSQSMTGDVNIVIAEFTQLNEEIPNQWNDLLAQDLDNLYGMSSFN HCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC RVKIQTDPRFIPSIEAAQQLAQTTNAHMVIYGDTQSSSTGAVVTLRFYVIDPHRINIGEL EEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEECCCEECHHHH INGEHQIGAQLQLSEADLLAGHSLLDLPDALILIEFTKALVYLGLEGTTNLDAALASINQ CCCCCCCCCEEEECCHHHHCCCCHHCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHH ALAAAEIHPNIKGKEVLLLFAAVITTEQCALEVDDHSACFARAQRYLDAILQLNPAYGRA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHCCCCCCCE YLAKANIFYAQGNLFQAMEFFNQAKALPDQPFGSYIEEKATFGIGNVCTLQLQYVQQRLG EEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHC GSVAANSEATKLANCALQAYQTLINNYDPVRNDPILQELTAWAYYWQGVVYVEAGQTNAA CCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCC QWSFEQAQRLATNADLQQRVQQRLTQGAAK CCCHHHHHHHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MDELAQHPPTAELAIDKIDKAELIRAFQQKMPGYDPAVVAQAICDLLEQKPTMIDGQALR CCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEECCCEEE LTINDQTANLASYNVVGGNLNQTTITVVMPNPIASANTAKLKRGLTRRIIALIVGFIGLL EEECCCCCCEEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH MPLHASDQFQASQQPSSQSMTGDVNIVIAEFTQLNEEIPNQWNDLLAQDLDNLYGMSSFN HCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC RVKIQTDPRFIPSIEAAQQLAQTTNAHMVIYGDTQSSSTGAVVTLRFYVIDPHRINIGEL EEEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEEEECCCEECHHHH INGEHQIGAQLQLSEADLLAGHSLLDLPDALILIEFTKALVYLGLEGTTNLDAALASINQ CCCCCCCCCEEEECCHHHHCCCCHHCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHH ALAAAEIHPNIKGKEVLLLFAAVITTEQCALEVDDHSACFARAQRYLDAILQLNPAYGRA HHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHCCCCCCCE YLAKANIFYAQGNLFQAMEFFNQAKALPDQPFGSYIEEKATFGIGNVCTLQLQYVQQRLG EEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHC GSVAANSEATKLANCALQAYQTLINNYDPVRNDPILQELTAWAYYWQGVVYVEAGQTNAA CCEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCC QWSFEQAQRLATNADLQQRVQQRLTQGAAK CCCHHHHHHHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA