| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159898735
Identifier: 159898735
GI number: 159898735
Start: 2813306
End: 2813974
Strand: Direct
Name: 159898735
Synonym: Haur_2214
Alternate gene names: NA
Gene position: 2813306-2813974 (Clockwise)
Preceding gene: 159898734
Following gene: 159898736
Centisome position: 44.33
GC content: 47.98
Gene sequence:
>669_bases ATGCCAACAACAATTCCAGCCCTACCCTGCGCAGATTTAGATCAAACGATCGCTTTTTGGTCTAGTCTTGGCTTTACGGT CAGCTACACCCAACGCAAGCCTAACCCCTATGCTGTAATCAATGCTGATGATTATTGTCTGCATTTTTTCGGCTTAAAAC AGCTAGCACCCGCCGAAAACTACAGCACCTGCTTGATCATTGTGCCCGAAGTTGAACAATTACATCAACAATTTAGTCAA CACCTGCGAACGAGTTTGGGCAAAGTTCCCGCCCAAGGCTTCCCACGCATCTCACGTATGAAACCTGGCCAAAGCCGCTT TACCCTCACCGATAATGCTGGCAATTCGATTATTTTCATTAAACAAGGTGTCGAAGATGAGGCGGCTGCCCAAGCCTACA AAAACCCTGAGCGAAACCCATTGCAACGGGCAATTGCCGTCGCCGCTCGTTTGCGCGATTTCAAAAACGATAATCAAACC GCCGCCAAAACGCTTGATCATGCCCTCGCTCGTTACCCTGATGCCCCAAGTTCTGATTATGCCCAAGCCTTGCTAGCACG AATCGAATTAGCCCAAGCCCTTGAGCAAGATCAACAACTTGAACAATTAACTGCCCAACTCAACAGCATTGAACTCAATC CTGAACAACGCCAACAGCTCGGTTTATAG
Upstream 100 bases:
>100_bases CGCTAGCAGCCCAAGCCTGAAATCCAGCCGAAGACTGAGCCAAAACAGCCGAGCCAAGGCTATACTACCAATCTTAGCAG CGAAAAATCTGGAGGTGGTT
Downstream 100 bases:
>100_bases CGTAAAAATGTGGTTCAGGCTGACGAATAGTTGTCAGTTTGAATCGCATAATGTTGATCCAAGCCTACGTTTTATTTGTA TAGCAGACTTTAATCTATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MPTTIPALPCADLDQTIAFWSSLGFTVSYTQRKPNPYAVINADDYCLHFFGLKQLAPAENYSTCLIIVPEVEQLHQQFSQ HLRTSLGKVPAQGFPRISRMKPGQSRFTLTDNAGNSIIFIKQGVEDEAAAQAYKNPERNPLQRAIAVAARLRDFKNDNQT AAKTLDHALARYPDAPSSDYAQALLARIELAQALEQDQQLEQLTAQLNSIELNPEQRQQLGL
Sequences:
>Translated_222_residues MPTTIPALPCADLDQTIAFWSSLGFTVSYTQRKPNPYAVINADDYCLHFFGLKQLAPAENYSTCLIIVPEVEQLHQQFSQ HLRTSLGKVPAQGFPRISRMKPGQSRFTLTDNAGNSIIFIKQGVEDEAAAQAYKNPERNPLQRAIAVAARLRDFKNDNQT AAKTLDHALARYPDAPSSDYAQALLARIELAQALEQDQQLEQLTAQLNSIELNPEQRQQLGL >Mature_221_residues PTTIPALPCADLDQTIAFWSSLGFTVSYTQRKPNPYAVINADDYCLHFFGLKQLAPAENYSTCLIIVPEVEQLHQQFSQH LRTSLGKVPAQGFPRISRMKPGQSRFTLTDNAGNSIIFIKQGVEDEAAAQAYKNPERNPLQRAIAVAARLRDFKNDNQTA AKTLDHALARYPDAPSSDYAQALLARIELAQALEQDQQLEQLTAQLNSIELNPEQRQQLGL
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24737; Mature: 24606
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTIPALPCADLDQTIAFWSSLGFTVSYTQRKPNPYAVINADDYCLHFFGLKQLAPAEN CCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEECCCHHHHHHHHHHHHCCCCC YSTCLIIVPEVEQLHQQFSQHLRTSLGKVPAQGFPRISRMKPGQSRFTLTDNAGNSIIFI CCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCEEEEECCCCCEEEEE KQGVEDEAAAQAYKNPERNPLQRAIAVAARLRDFKNDNQTAAKTLDHALARYPDAPSSDY ECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHH AQALLARIELAQALEQDQQLEQLTAQLNSIELNPEQRQQLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC >Mature Secondary Structure PTTIPALPCADLDQTIAFWSSLGFTVSYTQRKPNPYAVINADDYCLHFFGLKQLAPAEN CCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCEEEECCCHHHHHHHHHHHHCCCCC YSTCLIIVPEVEQLHQQFSQHLRTSLGKVPAQGFPRISRMKPGQSRFTLTDNAGNSIIFI CCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCEEEEECCCCCEEEEE KQGVEDEAAAQAYKNPERNPLQRAIAVAARLRDFKNDNQTAAKTLDHALARYPDAPSSDY ECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHH AQALLARIELAQALEQDQQLEQLTAQLNSIELNPEQRQQLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA