The gene/protein map for NC_009972 is currently unavailable.
Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898718

Identifier: 159898718

GI number: 159898718

Start: 2788317

End: 2790902

Strand: Reverse

Name: 159898718

Synonym: Haur_2197

Alternate gene names: NA

Gene position: 2790902-2788317 (Counterclockwise)

Preceding gene: 159898724

Following gene: 159898716

Centisome position: 43.97

GC content: 49.85

Gene sequence:

>2586_bases
ATGATCTACCCACGTGTGAAACGCTGGTTATCGATGTTAATCGGGACGGTCTTGCTCGCTCAATTGGTGCTAATTCCGCA
CCATGCTACGGCTCAAACCCGCTCGTCTGGACGCGAACCCGTGGTGGTTGCAACTGAGAGTAAAGGCTACTATCGCTATC
CAGATATGGGCATCTATCGCTATGCCTGGTCATCAACGGTGGATACGCAATCAACGACTCAAACGGCGGCTACTCGACCA
CGCCAAGATGTCAATCGCTTGGGTATGACTGGGGTTGTCGAAATTGAGCGCTACGCCAGTGGCCGCAGCACCAATCTGTT
GCGAGCTAAACTGGTTAATCCTAAGATGTATACCATCACCGAAACAGGCTGGCAGTTGGTTACTGATCGTGAGGTAGTTG
GCCCAGACTTCGACAAACAAGTTGAAGTTCCTTTCTATTTTCAACAACATACGACTGGTGAAGTTGTCGGCATGTATTTT
GATCGGACAGATAGCGAAGAAGTACGAAATATGAAACGGGCGGCGGTGTCGCAGTTGGCGATGCAGCTTGAATACAGCCC
CACACCAAGCTGTGATGATCGCACGATTACGTGTGCTCAGCCTTACAAACGGCTAGAAACTGATGTAACGGGAACCTACA
CAGCCGCCTATGCTGCGCGGATTGTAGATAGCCAGTATGTGGAAATTACGAAAACGCGAGATCAAGATTCATATACGGCC
TTTGCTGATCGCACGATTGTTGATGCTCGTGATACCCTGCTCTCCAGTAAACATACGGCGATGTATGATCTACGGGCCGG
CGTATTGGTGCGCAATAGCAATCAACAAACCATTCGCAATCGCTTGGGGAGTGCCGAGCAAGCTCAGTATGCTGGCTCTG
GCTATGGCATCGAATCGGGAATTAATGCCAATGAGAGCATAAGCCTTGATGGTGTTACCACAGGCGCATTGGATTCGGTA
ATCAGTTTATCGGGCGATGAACAGACCAGTGAATTGGCTGCCCTCATGCGGCGCACCGAGGGGCGCGATTATGTTGCTAC
ACCATTAGTAGCGACCATTGTTGAGCAGGCTGCTGTTGCTGATCGCGGTTTGGCGGCGAATGACTTAACCAGTGCTTTGG
CTCTTGTAGCCCAAAATCCTCACGATCCTAACAATGTGATCGTGCTGCGGGCGACGCTTAATACGCTTGATCGAAGTATG
CAGCAGCTTGATCAACGCTTGAGCAAAGGGACAATCGCCACCAACCTCTATGAACCTTTAATTGGCGCTCTGACTGGAGT
GATTGATCCCCAAGCCCAAGCGTTGGTGATTAAACACTTTATTCAATCGCCTAGCGTTGCAGCGTCAATTCGTACCCAAG
CCTTGACTGCCTTGACGATCTTCAAAAAGCCTAGCCTAGAAACGATTCGCTTTGTTACAACCTTGGCTGATCAAAATACT
CCTGAGGGAATGCAAGCATTGCTGGTGCTTGGTGCTATAGCAGGTACGATTCAACACGAACAGCCAGCCCAAGCTCGCGA
TCTAGCGACGATCATTGAAGCAACATTGACCCATGCCAAGAGCGATACTGAGCGTGATTTGGCCTTACGCGCTTTGGGCA
ATGCCGGAACCGCGACTGATCTTGCAGTTATTCGTCCATACCTGGCGGATGCCAACCAGATTGTTCGTACCTCTGCAATT
GATGCCCTGCGCAAATTTCCAGCAGCCGATACCAACGCGCTTCTCAACACCGCGTATCGTAGCGATACAAGCGAGATTGT
CCGTCATACGGCGCGTGAATTGCTGTATGCCAACGGTGATAGCCCAAGTTTGAATGCTTTCGATTGGAATTGGCAACAAT
TTATTGGCGGCGGTGATCTCAAGGGCGAATTGAAATCACGAGTATATGTGAGCGATGGCCCCGATATTACAGCCTTGGCC
CGAGGCGAAGCGAAAGCTCATGCTTGGTCGTGGAGCTATACACTGGCCGAAGCCCAAGCCTCAACCTATGTTCAGACCGA
GCATTCAATTAAATATCGCTACTTTGAAGCGTATGTCAAGGTCTTGGGTAACAATGTCTTTACCCCAATCAAAGAACGCC
TGCAATGTGGGGTTGAGCGCACAGGCAACTTATATCAAACGACGATCAATTTCTTCTCGCTTACGAAAACCTTTATGGTC
GGGCCAGTGCCTGTTCAACTTGGCTTGACCGCCAGTGGAACGATCTCAATTCCTTGGAAAATCGTGGCAAGTGCCTGTGA
TGTGCCGATTTCGGCCAATGCCAATATCTCGATTACGCCAACGGTCTGGGCTTCAGCCAGCGCAACGGCTGCCGTTACGA
TCTTTGTCGCTCGTGGTGGGGTTGGAATTACCGCTGATTTCTTGAAGACCGGCATCGAAGCGAAGGCCAGTGCATCCTAT
CATATTATCAATGGTTTTCACGGTAGTATTAATCTGAATGTCTCACTTCAGCCGATGGCCGTTCGCATCTTTTTGTGGTA
TCAATTGCGCAAATTGAATGGAAGCTGGAAACCACGTAACGAGTGGACGCTTTGGAATTGGAGTGCTCCAACCCAAACTT
GGCCGATTTGGAATCATAGTTTCTAA

Upstream 100 bases:

>100_bases
CGGTGTAGCTTGAGGATGGTTGTATGGTTTATGGATGAGCGCATCCAAGATTCGGCTTCGTGCAGTGTGTCGTGCTTAAT
TGGTCTGGAGGAATCTAGTA

Downstream 100 bases:

>100_bases
GGTGGTGCCTTAGGCCACGCATCTTTCCAAATATCATTCAGCCATCTCTTGAAAGTACCCCTCGCCTGCCGAGCAGGCGA
GGGGTACTTTGTAGGTTTTT

Product: lipid transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 861; Mature: 861

Protein sequence:

>861_residues
MIYPRVKRWLSMLIGTVLLAQLVLIPHHATAQTRSSGREPVVVATESKGYYRYPDMGIYRYAWSSTVDTQSTTQTAATRP
RQDVNRLGMTGVVEIERYASGRSTNLLRAKLVNPKMYTITETGWQLVTDREVVGPDFDKQVEVPFYFQQHTTGEVVGMYF
DRTDSEEVRNMKRAAVSQLAMQLEYSPTPSCDDRTITCAQPYKRLETDVTGTYTAAYAARIVDSQYVEITKTRDQDSYTA
FADRTIVDARDTLLSSKHTAMYDLRAGVLVRNSNQQTIRNRLGSAEQAQYAGSGYGIESGINANESISLDGVTTGALDSV
ISLSGDEQTSELAALMRRTEGRDYVATPLVATIVEQAAVADRGLAANDLTSALALVAQNPHDPNNVIVLRATLNTLDRSM
QQLDQRLSKGTIATNLYEPLIGALTGVIDPQAQALVIKHFIQSPSVAASIRTQALTALTIFKKPSLETIRFVTTLADQNT
PEGMQALLVLGAIAGTIQHEQPAQARDLATIIEATLTHAKSDTERDLALRALGNAGTATDLAVIRPYLADANQIVRTSAI
DALRKFPAADTNALLNTAYRSDTSEIVRHTARELLYANGDSPSLNAFDWNWQQFIGGGDLKGELKSRVYVSDGPDITALA
RGEAKAHAWSWSYTLAEAQASTYVQTEHSIKYRYFEAYVKVLGNNVFTPIKERLQCGVERTGNLYQTTINFFSLTKTFMV
GPVPVQLGLTASGTISIPWKIVASACDVPISANANISITPTVWASASATAAVTIFVARGGVGITADFLKTGIEAKASASY
HIINGFHGSINLNVSLQPMAVRIFLWYQLRKLNGSWKPRNEWTLWNWSAPTQTWPIWNHSF

Sequences:

>Translated_861_residues
MIYPRVKRWLSMLIGTVLLAQLVLIPHHATAQTRSSGREPVVVATESKGYYRYPDMGIYRYAWSSTVDTQSTTQTAATRP
RQDVNRLGMTGVVEIERYASGRSTNLLRAKLVNPKMYTITETGWQLVTDREVVGPDFDKQVEVPFYFQQHTTGEVVGMYF
DRTDSEEVRNMKRAAVSQLAMQLEYSPTPSCDDRTITCAQPYKRLETDVTGTYTAAYAARIVDSQYVEITKTRDQDSYTA
FADRTIVDARDTLLSSKHTAMYDLRAGVLVRNSNQQTIRNRLGSAEQAQYAGSGYGIESGINANESISLDGVTTGALDSV
ISLSGDEQTSELAALMRRTEGRDYVATPLVATIVEQAAVADRGLAANDLTSALALVAQNPHDPNNVIVLRATLNTLDRSM
QQLDQRLSKGTIATNLYEPLIGALTGVIDPQAQALVIKHFIQSPSVAASIRTQALTALTIFKKPSLETIRFVTTLADQNT
PEGMQALLVLGAIAGTIQHEQPAQARDLATIIEATLTHAKSDTERDLALRALGNAGTATDLAVIRPYLADANQIVRTSAI
DALRKFPAADTNALLNTAYRSDTSEIVRHTARELLYANGDSPSLNAFDWNWQQFIGGGDLKGELKSRVYVSDGPDITALA
RGEAKAHAWSWSYTLAEAQASTYVQTEHSIKYRYFEAYVKVLGNNVFTPIKERLQCGVERTGNLYQTTINFFSLTKTFMV
GPVPVQLGLTASGTISIPWKIVASACDVPISANANISITPTVWASASATAAVTIFVARGGVGITADFLKTGIEAKASASY
HIINGFHGSINLNVSLQPMAVRIFLWYQLRKLNGSWKPRNEWTLWNWSAPTQTWPIWNHSF
>Mature_861_residues
MIYPRVKRWLSMLIGTVLLAQLVLIPHHATAQTRSSGREPVVVATESKGYYRYPDMGIYRYAWSSTVDTQSTTQTAATRP
RQDVNRLGMTGVVEIERYASGRSTNLLRAKLVNPKMYTITETGWQLVTDREVVGPDFDKQVEVPFYFQQHTTGEVVGMYF
DRTDSEEVRNMKRAAVSQLAMQLEYSPTPSCDDRTITCAQPYKRLETDVTGTYTAAYAARIVDSQYVEITKTRDQDSYTA
FADRTIVDARDTLLSSKHTAMYDLRAGVLVRNSNQQTIRNRLGSAEQAQYAGSGYGIESGINANESISLDGVTTGALDSV
ISLSGDEQTSELAALMRRTEGRDYVATPLVATIVEQAAVADRGLAANDLTSALALVAQNPHDPNNVIVLRATLNTLDRSM
QQLDQRLSKGTIATNLYEPLIGALTGVIDPQAQALVIKHFIQSPSVAASIRTQALTALTIFKKPSLETIRFVTTLADQNT
PEGMQALLVLGAIAGTIQHEQPAQARDLATIIEATLTHAKSDTERDLALRALGNAGTATDLAVIRPYLADANQIVRTSAI
DALRKFPAADTNALLNTAYRSDTSEIVRHTARELLYANGDSPSLNAFDWNWQQFIGGGDLKGELKSRVYVSDGPDITALA
RGEAKAHAWSWSYTLAEAQASTYVQTEHSIKYRYFEAYVKVLGNNVFTPIKERLQCGVERTGNLYQTTINFFSLTKTFMV
GPVPVQLGLTASGTISIPWKIVASACDVPISANANISITPTVWASASATAAVTIFVARGGVGITADFLKTGIEAKASASY
HIINGFHGSINLNVSLQPMAVRIFLWYQLRKLNGSWKPRNEWTLWNWSAPTQTWPIWNHSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 94541; Mature: 94541

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYPRVKRWLSMLIGTVLLAQLVLIPHHATAQTRSSGREPVVVATESKGYYRYPDMGIYR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCEEECCCCCEEE
YAWSSTVDTQSTTQTAATRPRQDVNRLGMTGVVEIERYASGRSTNLLRAKLVNPKMYTIT
EEECCCCCCCCCHHHHHCCCHHHHHHCCCCCEEEEHHHCCCCCCCEEEEEECCCEEEEEE
ETGWQLVTDREVVGPDFDKQVEVPFYFQQHTTGEVVGMYFDRTDSEEVRNMKRAAVSQLA
CCCCEEEECCCCCCCCCCCEECCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
MQLEYSPTPSCDDRTITCAQPYKRLETDVTGTYTAAYAARIVDSQYVEITKTRDQDSYTA
HHEECCCCCCCCCCEEECCHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEH
FADRTIVDARDTLLSSKHTAMYDLRAGVLVRNSNQQTIRNRLGSAEQAQYAGSGYGIESG
HHCCEEEHHHHHHHCCCCCEEEEEECCEEEECCCHHHHHHHCCCCHHHHHCCCCCCCCCC
INANESISLDGVTTGALDSVISLSGDEQTSELAALMRRTEGRDYVATPLVATIVEQAAVA
CCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH
DRGLAANDLTSALALVAQNPHDPNNVIVLRATLNTLDRSMQQLDQRLSKGTIATNLYEPL
HCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IGALTGVIDPQAQALVIKHFIQSPSVAASIRTQALTALTIFKKPSLETIRFVTTLADQNT
HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCC
PEGMQALLVLGAIAGTIQHEQPAQARDLATIIEATLTHAKSDTERDLALRALGNAGTATD
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHH
LAVIRPYLADANQIVRTSAIDALRKFPAADTNALLNTAYRSDTSEIVRHTARELLYANGD
HHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHEEECCC
SPSLNAFDWNWQQFIGGGDLKGELKSRVYVSDGPDITALARGEAKAHAWSWSYTLAEAQA
CCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCEEEEEEEEEHHHHH
STYVQTEHSIKYRYFEAYVKVLGNNVFTPIKERLQCGVERTGNLYQTTINFFSLTKTFMV
HHEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHCCCEEEHHHHHHHHHHHHEE
GPVPVQLGLTASGTISIPWKIVASACDVPISANANISITPTVWASASATAAVTIFVARGG
CCEEEEEECCCCCEEECCHHHHHHHCCCCCCCCCCEEECCCEECCCCCCEEEEEEEECCC
VGITADFLKTGIEAKASASYHIINGFHGSINLNVSLQPMAVRIFLWYQLRKLNGSWKPRN
CCEEHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEECHHEEEHHHHHHHHHCCCCCCCCC
EWTLWNWSAPTQTWPIWNHSF
CEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MIYPRVKRWLSMLIGTVLLAQLVLIPHHATAQTRSSGREPVVVATESKGYYRYPDMGIYR
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEECCCCEEECCCCCEEE
YAWSSTVDTQSTTQTAATRPRQDVNRLGMTGVVEIERYASGRSTNLLRAKLVNPKMYTIT
EEECCCCCCCCCHHHHHCCCHHHHHHCCCCCEEEEHHHCCCCCCCEEEEEECCCEEEEEE
ETGWQLVTDREVVGPDFDKQVEVPFYFQQHTTGEVVGMYFDRTDSEEVRNMKRAAVSQLA
CCCCEEEECCCCCCCCCCCEECCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
MQLEYSPTPSCDDRTITCAQPYKRLETDVTGTYTAAYAARIVDSQYVEITKTRDQDSYTA
HHEECCCCCCCCCCEEECCHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCEEH
FADRTIVDARDTLLSSKHTAMYDLRAGVLVRNSNQQTIRNRLGSAEQAQYAGSGYGIESG
HHCCEEEHHHHHHHCCCCCEEEEEECCEEEECCCHHHHHHHCCCCHHHHHCCCCCCCCCC
INANESISLDGVTTGALDSVISLSGDEQTSELAALMRRTEGRDYVATPLVATIVEQAAVA
CCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH
DRGLAANDLTSALALVAQNPHDPNNVIVLRATLNTLDRSMQQLDQRLSKGTIATNLYEPL
HCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IGALTGVIDPQAQALVIKHFIQSPSVAASIRTQALTALTIFKKPSLETIRFVTTLADQNT
HHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCC
PEGMQALLVLGAIAGTIQHEQPAQARDLATIIEATLTHAKSDTERDLALRALGNAGTATD
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHH
LAVIRPYLADANQIVRTSAIDALRKFPAADTNALLNTAYRSDTSEIVRHTARELLYANGD
HHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHEEECCC
SPSLNAFDWNWQQFIGGGDLKGELKSRVYVSDGPDITALARGEAKAHAWSWSYTLAEAQA
CCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCEEEEEEEEEHHHHH
STYVQTEHSIKYRYFEAYVKVLGNNVFTPIKERLQCGVERTGNLYQTTINFFSLTKTFMV
HHEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHCCCEEEHHHHHHHHHHHHEE
GPVPVQLGLTASGTISIPWKIVASACDVPISANANISITPTVWASASATAAVTIFVARGG
CCEEEEEECCCCCEEECCHHHHHHHCCCCCCCCCCEEECCCEECCCCCCEEEEEEEECCC
VGITADFLKTGIEAKASASYHIINGFHGSINLNVSLQPMAVRIFLWYQLRKLNGSWKPRN
CCEEHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEECHHEEEHHHHHHHHHCCCCCCCCC
EWTLWNWSAPTQTWPIWNHSF
CEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA