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The map label for this gene is 159898716

Identifier: 159898716

GI number: 159898716

Start: 2785027

End: 2787057

Strand: Reverse

Name: 159898716

Synonym: Haur_2195

Alternate gene names: NA

Gene position: 2787057-2785027 (Counterclockwise)

Preceding gene: 159898718

Following gene: 159898713

Centisome position: 43.91

GC content: 56.33

Gene sequence:

>2031_bases
ATGCTTTCATCATCGTGGTTAATGCATTGGTCGCGGCGCAGCATTTGGATTTTACTGTTTGGCTTGTTGTCGATGGGCGT
TGGTTTTGGAAGCAAGCCTGCTCCATCAACGGCTGCTGCCTTGTTTACTGCTACTGACTGGCGGGCTATCCGCGCCCTAT
TGCCATTGCGGCAACAAGCCTATTTCAAGCCTTCGCAGGTCTCTGCGGACGATGCAATGGGTTGGAGTATTGCGGTGTCC
GGCGATACAATTGTGGTCGGTGCGCCTCACGAGGACAGTAGCACGGCAGGAGTTCAGAATGGGACGACACCGACGGTCGA
TGAGGTGGCGAGTGATGCGGGAGCCGCCTATGTGTTTGTGCGGACTGGCACGAGCTGGAGTCAGCAGGCCTACCTGAAAG
CGTCGCAGGTAGCGGCAGGCGATGGCTTTGGCACCAGTGTGGCGGTGTCCGGCGATATCATTGTGGTTGGTGCGCCTCAC
GAGGATAGCGGTACGGTGGGCGTGCAGAATGGGGCGACACCGACAATCGATGAGGCGGCGAGTGATGCGGGAGCCGCCTA
TGTGTTTGTGCGGACTGGCACGAGCTGGAGTCAGCAGGCCTACCTGAAAGCGTCGCAGGTATCGGCAGGCGATGATTTTG
GTGCCAGCGTGGCGGTGGCAGATACAACAGTTGTCGTTGGGGCACACCAAGAGGATGGTAGTACGACGGGTGTACAGAAC
GGGGCCACACCGACGGTTGATGAGGCAACGAGTGATGCCGGAGCAGCGTATGTGTTCGTGCGTGATGGGAGAAGCTGGAG
CCAGCAGGCCTACCTGAAAGCTTCGCAGGTTTCGGCAGGCGATATTTTTGGTGCCAGCGTGGCGGTGGCAGATACAACAG
TTGTTGTTGGGGCACACCAAGAGGATAGTAGCACCGCCGGGGTTTTCCATAGCGCCGCGCCAACGGTCGATGAGGCGGCG
AGTGATGCGGGAGCAGTGTATGTGTTCGTGCGCGATGGCACAAGTTGGAGTCAGCAGGCCTATCTGAAAGCGTCGCAGGT
GTCGGCAGGCGATATCTTTGGCTTTAGTGTGGCGGTGGCAGGGGAGACGCTGGTCGTCGGTGCGCCCTATGAAGATAGTA
GTACGGCGGGTGTTTCCAACAGTGCCACACCAACGGTCGATGAAGATATGACCAACGCTGGAGCAGTGTATGTGTTCGTG
CGCGATGGCACAAGTTGGGTTCAGCAAGCCTATCTGAAAGCGTCGCAAGTTTCGGCAGGCGATATCTTTGGCTTTAGTGT
GGCGGTGGCGGGCGATACTATCGTAGTCGGTGCGCCCCATGAAGATAGTAGTACGTCAGGTGTTTCCAGCAGCGCGACAC
CAACGGTCGATGAAGCCATGAGTGATGCAGGGGCCGCGTATGTCGTCGTGCGCAATGGCACAACTTGGGTTCAACAAACC
TACCTCAAGGCTGCCCAAACTTCAGTGTCCGACATCTTTGGCTTTAGTGTGGCGGTGGCAGCAGATACGCTCGTTGTTGG
TGTACCCTACGAGGATAGCAGTACGGCGGGTGTTGATCATAGCACGCTGCCCACGGTTGATGAGTTAGCAAGCGATGCCG
GAGCGGTCTATGGGTTTACCAATCTGCCAACCTTGTATCTGCCTTTCGTCACAACCAGTCAGCCATTGGTGATTGCGCCA
CTCACTCCTGTCGCCGTGCCAACAACTCCAGTTGGTACGCCTGGCATGATTTTCTTAACCAAAACAATCACGTTGCCAAC
CCCATTATCAAGTAGTGGTCACTATTGGCTATCCGCAAGCCCGACGGCACTAGTGCCAGGTTTGGTTGATGATGCGGTGA
TTCTGCGAGTGGGGTCAACTGAAATCCTGCGTCATCACTATGGGATGACGGGCGAACTTCAAGCCGCCTTGGTGGTAGTC
CCGGTCGGTGATCTGTTGCCATGGGCAGGCCAAACAATTACCGTCGATTTTACCGATATTTCTGGCCTCGTGTATAGCAC
GACCCCGTTATATTTGGTGTGGACACCCTAA

Upstream 100 bases:

>100_bases
TTGCATATGGTCGCTCTCTCACTTGTGCCATCCTGCATCCTCTCTGCCATTTGGGTCAGCAGACTAGAAGTGATCGTTTT
TATGTGTACGTGGAGGTTGT

Downstream 100 bases:

>100_bases
ACATCCCGTACCCCTGACCCCCGCTCCCGCACGCGAGGCGAGGGGGAACCACGAAACGAAAAGCCCCTCACCCGCTGTAA
CGGGCGAGGGGTTGGAGTGA

Product: alpha beta-propellor repeat-containing integrin

Products: NA

Alternate protein names: Alpha Beta-Propellor Repeat-Containing Integrin; PKD Domain-Containing Protein; Lipoprotein; PAS/PAC Sensor Signal Transduction Histidine Kinase; VCBS Protein; 5-Nucleotidase

Number of amino acids: Translated: 676; Mature: 676

Protein sequence:

>676_residues
MLSSSWLMHWSRRSIWILLFGLLSMGVGFGSKPAPSTAAALFTATDWRAIRALLPLRQQAYFKPSQVSADDAMGWSIAVS
GDTIVVGAPHEDSSTAGVQNGTTPTVDEVASDAGAAYVFVRTGTSWSQQAYLKASQVAAGDGFGTSVAVSGDIIVVGAPH
EDSGTVGVQNGATPTIDEAASDAGAAYVFVRTGTSWSQQAYLKASQVSAGDDFGASVAVADTTVVVGAHQEDGSTTGVQN
GATPTVDEATSDAGAAYVFVRDGRSWSQQAYLKASQVSAGDIFGASVAVADTTVVVGAHQEDSSTAGVFHSAAPTVDEAA
SDAGAVYVFVRDGTSWSQQAYLKASQVSAGDIFGFSVAVAGETLVVGAPYEDSSTAGVSNSATPTVDEDMTNAGAVYVFV
RDGTSWVQQAYLKASQVSAGDIFGFSVAVAGDTIVVGAPHEDSSTSGVSSSATPTVDEAMSDAGAAYVVVRNGTTWVQQT
YLKAAQTSVSDIFGFSVAVAADTLVVGVPYEDSSTAGVDHSTLPTVDELASDAGAVYGFTNLPTLYLPFVTTSQPLVIAP
LTPVAVPTTPVGTPGMIFLTKTITLPTPLSSSGHYWLSASPTALVPGLVDDAVILRVGSTEILRHHYGMTGELQAALVVV
PVGDLLPWAGQTITVDFTDISGLVYSTTPLYLVWTP

Sequences:

>Translated_676_residues
MLSSSWLMHWSRRSIWILLFGLLSMGVGFGSKPAPSTAAALFTATDWRAIRALLPLRQQAYFKPSQVSADDAMGWSIAVS
GDTIVVGAPHEDSSTAGVQNGTTPTVDEVASDAGAAYVFVRTGTSWSQQAYLKASQVAAGDGFGTSVAVSGDIIVVGAPH
EDSGTVGVQNGATPTIDEAASDAGAAYVFVRTGTSWSQQAYLKASQVSAGDDFGASVAVADTTVVVGAHQEDGSTTGVQN
GATPTVDEATSDAGAAYVFVRDGRSWSQQAYLKASQVSAGDIFGASVAVADTTVVVGAHQEDSSTAGVFHSAAPTVDEAA
SDAGAVYVFVRDGTSWSQQAYLKASQVSAGDIFGFSVAVAGETLVVGAPYEDSSTAGVSNSATPTVDEDMTNAGAVYVFV
RDGTSWVQQAYLKASQVSAGDIFGFSVAVAGDTIVVGAPHEDSSTSGVSSSATPTVDEAMSDAGAAYVVVRNGTTWVQQT
YLKAAQTSVSDIFGFSVAVAADTLVVGVPYEDSSTAGVDHSTLPTVDELASDAGAVYGFTNLPTLYLPFVTTSQPLVIAP
LTPVAVPTTPVGTPGMIFLTKTITLPTPLSSSGHYWLSASPTALVPGLVDDAVILRVGSTEILRHHYGMTGELQAALVVV
PVGDLLPWAGQTITVDFTDISGLVYSTTPLYLVWTP
>Mature_676_residues
MLSSSWLMHWSRRSIWILLFGLLSMGVGFGSKPAPSTAAALFTATDWRAIRALLPLRQQAYFKPSQVSADDAMGWSIAVS
GDTIVVGAPHEDSSTAGVQNGTTPTVDEVASDAGAAYVFVRTGTSWSQQAYLKASQVAAGDGFGTSVAVSGDIIVVGAPH
EDSGTVGVQNGATPTIDEAASDAGAAYVFVRTGTSWSQQAYLKASQVSAGDDFGASVAVADTTVVVGAHQEDGSTTGVQN
GATPTVDEATSDAGAAYVFVRDGRSWSQQAYLKASQVSAGDIFGASVAVADTTVVVGAHQEDSSTAGVFHSAAPTVDEAA
SDAGAVYVFVRDGTSWSQQAYLKASQVSAGDIFGFSVAVAGETLVVGAPYEDSSTAGVSNSATPTVDEDMTNAGAVYVFV
RDGTSWVQQAYLKASQVSAGDIFGFSVAVAGDTIVVGAPHEDSSTSGVSSSATPTVDEAMSDAGAAYVVVRNGTTWVQQT
YLKAAQTSVSDIFGFSVAVAADTLVVGVPYEDSSTAGVDHSTLPTVDELASDAGAVYGFTNLPTLYLPFVTTSQPLVIAP
LTPVAVPTTPVGTPGMIFLTKTITLPTPLSSSGHYWLSASPTALVPGLVDDAVILRVGSTEILRHHYGMTGELQAALVVV
PVGDLLPWAGQTITVDFTDISGLVYSTTPLYLVWTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69340; Mature: 69340

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSSSWLMHWSRRSIWILLFGLLSMGVGFGSKPAPSTAAALFTATDWRAIRALLPLRQQA
CCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHH
YFKPSQVSADDAMGWSIAVSGDTIVVGAPHEDSSTAGVQNGTTPTVDEVASDAGAAYVFV
CCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEE
RTGTSWSQQAYLKASQVAAGDGFGTSVAVSGDIIVVGAPHEDSGTVGVQNGATPTIDEAA
EECCCCCHHHHHHHHHEECCCCCCCEEEEECCEEEEECCCCCCCCEEECCCCCCCHHHHC
SDAGAAYVFVRTGTSWSQQAYLKASQVSAGDDFGASVAVADTTVVVGAHQEDGSTTGVQN
CCCCEEEEEEEECCCCCHHHEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCC
GATPTVDEATSDAGAAYVFVRDGRSWSQQAYLKASQVSAGDIFGASVAVADTTVVVGAHQ
CCCCCCCCCCCCCCEEEEEEECCCCCCHHHHEEECCCCCCCCCCCEEEEEEEEEEEECCC
EDSSTAGVFHSAAPTVDEAASDAGAVYVFVRDGTSWSQQAYLKASQVSAGDIFGFSVAVA
CCCCCCCEEECCCCCHHHHCCCCCEEEEEEECCCCCCHHHEEEECCCCCCCEEEEEEEEC
GETLVVGAPYEDSSTAGVSNSATPTVDEDMTNAGAVYVFVRDGTSWVQQAYLKASQVSAG
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCC
DIFGFSVAVAGDTIVVGAPHEDSSTSGVSSSATPTVDEAMSDAGAAYVVVRNGTTWVQQT
CEEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCHHHHHH
YLKAAQTSVSDIFGFSVAVAADTLVVGVPYEDSSTAGVDHSTLPTVDELASDAGAVYGFT
HHHHHHHHHHHHHCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEC
NLPTLYLPFVTTSQPLVIAPLTPVAVPTTPVGTPGMIFLTKTITLPTPLSSSGHYWLSAS
CCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEECC
PTALVPGLVDDAVILRVGSTEILRHHYGMTGELQAALVVVPVGDLLPWAGQTITVDFTDI
CCEECCCCCCCEEEEEECCHHHHHHHCCCCCCEEEEEEEEECHHCCCCCCCEEEEEEECC
SGLVYSTTPLYLVWTP
CCEEEECCCEEEEECC
>Mature Secondary Structure
MLSSSWLMHWSRRSIWILLFGLLSMGVGFGSKPAPSTAAALFTATDWRAIRALLPLRQQA
CCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHH
YFKPSQVSADDAMGWSIAVSGDTIVVGAPHEDSSTAGVQNGTTPTVDEVASDAGAAYVFV
CCCCCCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEE
RTGTSWSQQAYLKASQVAAGDGFGTSVAVSGDIIVVGAPHEDSGTVGVQNGATPTIDEAA
EECCCCCHHHHHHHHHEECCCCCCCEEEEECCEEEEECCCCCCCCEEECCCCCCCHHHHC
SDAGAAYVFVRTGTSWSQQAYLKASQVSAGDDFGASVAVADTTVVVGAHQEDGSTTGVQN
CCCCEEEEEEEECCCCCHHHEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCC
GATPTVDEATSDAGAAYVFVRDGRSWSQQAYLKASQVSAGDIFGASVAVADTTVVVGAHQ
CCCCCCCCCCCCCCEEEEEEECCCCCCHHHHEEECCCCCCCCCCCEEEEEEEEEEEECCC
EDSSTAGVFHSAAPTVDEAASDAGAVYVFVRDGTSWSQQAYLKASQVSAGDIFGFSVAVA
CCCCCCCEEECCCCCHHHHCCCCCEEEEEEECCCCCCHHHEEEECCCCCCCEEEEEEEEC
GETLVVGAPYEDSSTAGVSNSATPTVDEDMTNAGAVYVFVRDGTSWVQQAYLKASQVSAG
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCC
DIFGFSVAVAGDTIVVGAPHEDSSTSGVSSSATPTVDEAMSDAGAAYVVVRNGTTWVQQT
CEEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCEEEEEEECCCHHHHHH
YLKAAQTSVSDIFGFSVAVAADTLVVGVPYEDSSTAGVDHSTLPTVDELASDAGAVYGFT
HHHHHHHHHHHHHCEEEEEEECEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEC
NLPTLYLPFVTTSQPLVIAPLTPVAVPTTPVGTPGMIFLTKTITLPTPLSSSGHYWLSAS
CCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEECC
PTALVPGLVDDAVILRVGSTEILRHHYGMTGELQAALVVVPVGDLLPWAGQTITVDFTDI
CCEECCCCCCCEEEEEECCHHHHHHHCCCCCCEEEEEEEEECHHCCCCCCCEEEEEEECC
SGLVYSTTPLYLVWTP
CCEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA