| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898724
Identifier: 159898724
GI number: 159898724
Start: 2799137
End: 2800336
Strand: Reverse
Name: 159898724
Synonym: Haur_2203
Alternate gene names: NA
Gene position: 2800336-2799137 (Counterclockwise)
Preceding gene: 159898729
Following gene: 159898718
Centisome position: 44.12
GC content: 51.92
Gene sequence:
>1200_bases ATGTTGATCTTGGCGGTTAGTGCGTTTGCTGGCTCAAATTCATCATTCGCCCAGTCACGCGATGTAGAAAAACCCGTCGA TATTGGCGATGCCGTTGGTCTCGACCTCAATGCCCCTGCTGTTCCTGGTCAGTTTGTCATCAAATTCAAGAATTCAACCT CAAAAGCTAGCCGCGCCAATAGCTTGAGTGCCTTGGGCGCAGTGCAAATCGATCGGATCGAAGCGCTTGACGCTGAAGTC GTCGAATTCGCTAGCTTGAAGAGCAACGATAGTTTGGCAATGCGCCAAGCCATGGTTGAAAGCTTGCTCAAAGATGGCAA CATCGAATATGCCGAACCCAACTTTATCTATACTTCAACCTACACTCCCAACGACCCAGGTCGTAGCTCACAATGGGCAT GGGGTGTAACCCAAGCATACACTGGTTGGGATATCACGCGCGGTAGCAGCAGCGTTGTCGTTGCGGTTGTTGACACTGGG ATTCAAAGCACTCACCCTGATTTGGATGCCAAAATTGTCGCTGGCTACGACTACATCGATAATGACTCAACGCCAAATGA TGGAAATGGCCACGGTACGCACGTCGCTGGGACGGTTGCTGCTGAAACCAACAATAGCACTGGTGGCGCAGGAACCTGCC CCAACTGTCGCTTGATGGGCGTTCGCGTCTTGAATAACAGCGGTAGCGGTACCTTGGCTGGTGTGGCCAATGGCATCACC TACGCTGCTAACAATGGCGCAAAGGTCATCAACTTAAGCCTTGGTGGCGGTGGTTCAACGGCCTTGCAAAATGCCGTCAA CTACGCTTGGGGCCGTGGAGTATTCTTGGCTTGTGCCGCTGGTAACAGCAACACCTCAAGCACCACCAGCGCTTACCCAG CTGCGTATACCAACTGTTTTGCGGTTGCATCAACGACTTCAACCGATGCCCGCTCATCATTCTCAAACTATGGTACATGG GTCGAAGTGGCTGCCCCTGGTTCGAGCATCTACTCAACCTGGATTAACAGTGGCTACAACACGATCAATGGTACCTCAAT GGCTACCCCACACGTTGCCGGTTTGGCTGGCTTGTTGTCATCACAAGGCTTGACCAACAGCCAAATCAAGAGCAAAATCT GCTCAAGCTCCGACCAAATTAGCGGGACTGGCACGCGCTGGACTTGCGGTCGGATCAACATCTACAAAGCTGTTCAATAG
Upstream 100 bases:
>100_bases TGTAGGTACAGCCGCTGTTGGTTTGGTACTGCACGATTTTGGTTAAAAAATCAACCCACATGTTGAGGAGGCAACTTTGA AGCGTCTGTTTGTTTCGAGC
Downstream 100 bases:
>100_bases TTCGACTCTCATCTGACGGAATAAGTGGTCAGCTGACCGCTTGGTGTGTGGAAGTGTTCAATTGATCCTGTAAAAACCTA AGCAACCTATCAGATCAAAA
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MLILAVSAFAGSNSSFAQSRDVEKPVDIGDAVGLDLNAPAVPGQFVIKFKNSTSKASRANSLSALGAVQIDRIEALDAEV VEFASLKSNDSLAMRQAMVESLLKDGNIEYAEPNFIYTSTYTPNDPGRSSQWAWGVTQAYTGWDITRGSSSVVVAVVDTG IQSTHPDLDAKIVAGYDYIDNDSTPNDGNGHGTHVAGTVAAETNNSTGGAGTCPNCRLMGVRVLNNSGSGTLAGVANGIT YAANNGAKVINLSLGGGGSTALQNAVNYAWGRGVFLACAAGNSNTSSTTSAYPAAYTNCFAVASTTSTDARSSFSNYGTW VEVAAPGSSIYSTWINSGYNTINGTSMATPHVAGLAGLLSSQGLTNSQIKSKICSSSDQISGTGTRWTCGRINIYKAVQ
Sequences:
>Translated_399_residues MLILAVSAFAGSNSSFAQSRDVEKPVDIGDAVGLDLNAPAVPGQFVIKFKNSTSKASRANSLSALGAVQIDRIEALDAEV VEFASLKSNDSLAMRQAMVESLLKDGNIEYAEPNFIYTSTYTPNDPGRSSQWAWGVTQAYTGWDITRGSSSVVVAVVDTG IQSTHPDLDAKIVAGYDYIDNDSTPNDGNGHGTHVAGTVAAETNNSTGGAGTCPNCRLMGVRVLNNSGSGTLAGVANGIT YAANNGAKVINLSLGGGGSTALQNAVNYAWGRGVFLACAAGNSNTSSTTSAYPAAYTNCFAVASTTSTDARSSFSNYGTW VEVAAPGSSIYSTWINSGYNTINGTSMATPHVAGLAGLLSSQGLTNSQIKSKICSSSDQISGTGTRWTCGRINIYKAVQ >Mature_399_residues MLILAVSAFAGSNSSFAQSRDVEKPVDIGDAVGLDLNAPAVPGQFVIKFKNSTSKASRANSLSALGAVQIDRIEALDAEV VEFASLKSNDSLAMRQAMVESLLKDGNIEYAEPNFIYTSTYTPNDPGRSSQWAWGVTQAYTGWDITRGSSSVVVAVVDTG IQSTHPDLDAKIVAGYDYIDNDSTPNDGNGHGTHVAGTVAAETNNSTGGAGTCPNCRLMGVRVLNNSGSGTLAGVANGIT YAANNGAKVINLSLGGGGSTALQNAVNYAWGRGVFLACAAGNSNTSSTTSAYPAAYTNCFAVASTTSTDARSSFSNYGTW VEVAAPGSSIYSTWINSGYNTINGTSMATPHVAGLAGLLSSQGLTNSQIKSKICSSSDQISGTGTRWTCGRINIYKAVQ
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI31317307, Length=311, Percent_Identity=26.3665594855305, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI4506775, Length=283, Percent_Identity=27.208480565371, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI76443679, Length=123, Percent_Identity=37.3983739837398, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI25141268, Length=241, Percent_Identity=24.4813278008299, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6320775, Length=398, Percent_Identity=29.8994974874372, Blast_Score=140, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6324576, Length=229, Percent_Identity=37.9912663755458, Blast_Score=123, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6319893, Length=388, Percent_Identity=29.3814432989691, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI45550681, Length=286, Percent_Identity=24.1258741258741, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 41164; Mature: 41164
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLILAVSAFAGSNSSFAQSRDVEKPVDIGDAVGLDLNAPAVPGQFVIKFKNSTSKASRAN CEEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHC SLSALGAVQIDRIEALDAEVVEFASLKSNDSLAMRQAMVESLLKDGNIEYAEPNFIYTST CHHHHCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEC YTPNDPGRSSQWAWGVTQAYTGWDITRGSSSVVVAVVDTGIQSTHPDLDAKIVAGYDYID CCCCCCCCCCCEEECCCEEECCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCEECC NDSTPNDGNGHGTHVAGTVAAETNNSTGGAGTCPNCRLMGVRVLNNSGSGTLAGVANGIT CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCEE YAANNGAKVINLSLGGGGSTALQNAVNYAWGRGVFLACAAGNSNTSSTTSAYPAAYTNCF EEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHCEE AVASTTSTDARSSFSNYGTWVEVAAPGSSIYSTWINSGYNTINGTSMATPHVAGLAGLLS EEEECCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH SQGLTNSQIKSKICSSSDQISGTGTRWTCGRINIYKAVQ CCCCCHHHHHHHHHCCCCCCCCCCCEEEECEEEEEEECC >Mature Secondary Structure MLILAVSAFAGSNSSFAQSRDVEKPVDIGDAVGLDLNAPAVPGQFVIKFKNSTSKASRAN CEEEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHC SLSALGAVQIDRIEALDAEVVEFASLKSNDSLAMRQAMVESLLKDGNIEYAEPNFIYTST CHHHHCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEC YTPNDPGRSSQWAWGVTQAYTGWDITRGSSSVVVAVVDTGIQSTHPDLDAKIVAGYDYID CCCCCCCCCCCEEECCCEEECCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCEECC NDSTPNDGNGHGTHVAGTVAAETNNSTGGAGTCPNCRLMGVRVLNNSGSGTLAGVANGIT CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCEE YAANNGAKVINLSLGGGGSTALQNAVNYAWGRGVFLACAAGNSNTSSTTSAYPAAYTNCF EEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHCEE AVASTTSTDARSSFSNYGTWVEVAAPGSSIYSTWINSGYNTINGTSMATPHVAGLAGLLS EEEECCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH SQGLTNSQIKSKICSSSDQISGTGTRWTCGRINIYKAVQ CCCCCHHHHHHHHHCCCCCCCCCCCEEEECEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]