| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898713
Identifier: 159898713
GI number: 159898713
Start: 2776447
End: 2778759
Strand: Reverse
Name: 159898713
Synonym: Haur_2192
Alternate gene names: NA
Gene position: 2778759-2776447 (Counterclockwise)
Preceding gene: 159898716
Following gene: 159898712
Centisome position: 43.78
GC content: 52.62
Gene sequence:
>2313_bases ATGATTCGTAAACGCTATCTTATGCTAATCGCCCTCGTTTTAGCCAGCACATGGCTGCTACCGGTTGCTGCCCAAGATCA AACCAAGCAGCAACCATCGGCAGTTTTAGCACCTTCAGGCGAAACAATTACCTACCAAGGCATGTTACGCGAAAGTGGCA GCTTGGCAAATGGTGTGTTCGATTTTCAATTTGGTTTGTACGTTGACGCAGTCGGTGGCACAGCTTTAGGCGTAGTCACC CGCAATGATGTGACTGTGAGCAATGGTTTATTTACTAGCGAACTCACCTTTAGCGAAGGCTTGTTCAATGGTGAAAGTCG CTGGATCGAGCTAGCAGTTAAGGCCGATGCTAGCGGCAGCTATACCACGCTCACGCCCCGCCAACAAGTGACAGCCGCGC CCTTGGCTTTAGCCTTGCCAGGCTTCTGGACACGCCAAAACAGCTTTAGCCCCAACTTAATTGGCGGCTACGAAGGCAAT ACTGCCTCATCGTTGGCGATTGGGATCACAATTAATGGTGGTGGCAACTCAGGTGGCCTGAATAGCGCCTACGATAACTA TAGTTCAATTGGTGGTGGGGCTGGCAATAGCGTCGGCAGCAACGATGGTAGCCCAAGCAACGATGTCTATTCAACCATCG GTGGGGGCATCAACAATACCGCCAGCCAAGAATACATTGTGATTGGCGGTGGTCAAACCAACAACGTCAGCGGCGCTTGG TCAACGATCGGTGGTGGCATCAACAATGTGATTAATAATAGTCGCTATAGTGTAATTGCTGGTGGTGGTGGCACAACTGG CAACACAATTTACGATGATTATGGCACAATTGCTGGGGGTAGCGAAAATATCGCAGGTTTAACTGGCGAGGCCGTCAGCC AAATGTATGCCACTGTTGGCGGTGGTCGGGCCAATGTTGCCAGCGATAACTATGCGATCGTCAGTGGTGGCCGCAGCAAC ACTGCCAGCGATGATTACTCAACAGTTGCTGGTGGCTACAACAACAGTGCTGCTGCTCAATATGCCACAATCAGCGGCGG TGGCAATTCCAACAGTGCCCAAGCCAATCGTGTTTACGACGATTATGGCACAATCGGCGGTGGTACAAATAACGTAGCGG GCGTAACTGGCGATACAACTGGTCAGCAATATGCCACGGTTGGTGGTGGCAATGGCAATACCGCCAGCGAAGATGGTGCG ACGGTTGCTGGCGGCAGTGGCAATAGCGCTAGCGCCAACTACACCACAGTTGCTGGTGGCACTACTAATGCTGCCAGTGG CGATACCAGCAGCATCGGTGGTGGCCAACTGAATGCAGCCAGCGGTGGCTATTCAGTAGTTGCTGGTGGACGCGGCAATA CTGCTTCTTCCAATATCGCCGGAGTTGGTGGTGGCCAATCGAATCAAGCGACCAACACTGGCGCATATGTCGGGGGCGGC CAGACCAATACAGCGACTGGCCAATATTCGGTCGTGGCTGGTGGTGTCAATAATGATGCCACTAATACCTACGCTTCCGT AGTTGGTGGTATCAACAATCAAGCGGCAGGTGCGGGTACATTTGTCGGCGGTGGGCAAAACAATAATGCCAACAGCACCT TATCGGCAATTCTGGGTGGTAGCGGCAATACAACCTTGGCCGATTATACCGTTGCCGCTGGCGAAAATGCCGTCGCTGCT CACGCTGGGAGTTTTGTTTGGGCTGGTCAACAAGCCAACAAAGATGATAGTATTTCGACGACTGGGCCAGGTCAGTTTAT CGTGCGTGCTCCAGGTGGGGCGTGGTTTGGCAGCAGCACCAAGGTCGATATGCCTGATGGCGCGATTTTGGCAACTGAAA GTGGCGCTTTCCTGAGCAAAGGCGGTACATGGGCCAATTCATCAGATAAAAATCTCAAATCAAATTTCGCCACGATCGAT CCCCAAGCTGTGCTCGATCAGCTTGCCAGTATTCCCGTACAAGCTTGGAGCTACAACAGCGAAGGTGCAGCAGTTCGCCA TATTGGCCCAACCGCCCAAGATTTTTATGCCGCCTTTGGTTTAGGCACTGATGATCGCCACATTGCCACGGTCGATGCTG ATGGCGTGGCCCTCGCTGGAGTCCAAGGTTTATACAATTTAGCCACCGAACAAGCTCAATTACTCGATCAACAAGCCGAG CACATGGCGGCACTTGATGCACGACTCGCAGCCTTGGAACATAGCCAAAATCCTCAAACCAGTCTCCCATGGTTGTGGTT GATCGCGATTGCCGCAGTTGGATTGGGCTTGGGGTGGATGCTTGGTCGTCGCAGCAAGGGGCAACGCGCATGA
Upstream 100 bases:
>100_bases CGCACCATCTAGATAGTTCGGGTCTCAAGCCTCGCGTCGTCGTGAACGAGGGATAAGAGTGCAGAACCATGGCAGCATTT TATTCAAAGGAGCCACAATC
Downstream 100 bases:
>100_bases AACGTCGTTTGCTCTGGTGGGCGATCCCATTGATCGCGCTTATGCTAGCAGTTCAGCTAGCCCAAGCTCAAACTGGCGGG GTTTTTAGCCTCGATTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 770; Mature: 770
Protein sequence:
>770_residues MIRKRYLMLIALVLASTWLLPVAAQDQTKQQPSAVLAPSGETITYQGMLRESGSLANGVFDFQFGLYVDAVGGTALGVVT RNDVTVSNGLFTSELTFSEGLFNGESRWIELAVKADASGSYTTLTPRQQVTAAPLALALPGFWTRQNSFSPNLIGGYEGN TASSLAIGITINGGGNSGGLNSAYDNYSSIGGGAGNSVGSNDGSPSNDVYSTIGGGINNTASQEYIVIGGGQTNNVSGAW STIGGGINNVINNSRYSVIAGGGGTTGNTIYDDYGTIAGGSENIAGLTGEAVSQMYATVGGGRANVASDNYAIVSGGRSN TASDDYSTVAGGYNNSAAAQYATISGGGNSNSAQANRVYDDYGTIGGGTNNVAGVTGDTTGQQYATVGGGNGNTASEDGA TVAGGSGNSASANYTTVAGGTTNAASGDTSSIGGGQLNAASGGYSVVAGGRGNTASSNIAGVGGGQSNQATNTGAYVGGG QTNTATGQYSVVAGGVNNDATNTYASVVGGINNQAAGAGTFVGGGQNNNANSTLSAILGGSGNTTLADYTVAAGENAVAA HAGSFVWAGQQANKDDSISTTGPGQFIVRAPGGAWFGSSTKVDMPDGAILATESGAFLSKGGTWANSSDKNLKSNFATID PQAVLDQLASIPVQAWSYNSEGAAVRHIGPTAQDFYAAFGLGTDDRHIATVDADGVALAGVQGLYNLATEQAQLLDQQAE HMAALDARLAALEHSQNPQTSLPWLWLIAIAAVGLGLGWMLGRRSKGQRA
Sequences:
>Translated_770_residues MIRKRYLMLIALVLASTWLLPVAAQDQTKQQPSAVLAPSGETITYQGMLRESGSLANGVFDFQFGLYVDAVGGTALGVVT RNDVTVSNGLFTSELTFSEGLFNGESRWIELAVKADASGSYTTLTPRQQVTAAPLALALPGFWTRQNSFSPNLIGGYEGN TASSLAIGITINGGGNSGGLNSAYDNYSSIGGGAGNSVGSNDGSPSNDVYSTIGGGINNTASQEYIVIGGGQTNNVSGAW STIGGGINNVINNSRYSVIAGGGGTTGNTIYDDYGTIAGGSENIAGLTGEAVSQMYATVGGGRANVASDNYAIVSGGRSN TASDDYSTVAGGYNNSAAAQYATISGGGNSNSAQANRVYDDYGTIGGGTNNVAGVTGDTTGQQYATVGGGNGNTASEDGA TVAGGSGNSASANYTTVAGGTTNAASGDTSSIGGGQLNAASGGYSVVAGGRGNTASSNIAGVGGGQSNQATNTGAYVGGG QTNTATGQYSVVAGGVNNDATNTYASVVGGINNQAAGAGTFVGGGQNNNANSTLSAILGGSGNTTLADYTVAAGENAVAA HAGSFVWAGQQANKDDSISTTGPGQFIVRAPGGAWFGSSTKVDMPDGAILATESGAFLSKGGTWANSSDKNLKSNFATID PQAVLDQLASIPVQAWSYNSEGAAVRHIGPTAQDFYAAFGLGTDDRHIATVDADGVALAGVQGLYNLATEQAQLLDQQAE HMAALDARLAALEHSQNPQTSLPWLWLIAIAAVGLGLGWMLGRRSKGQRA >Mature_770_residues MIRKRYLMLIALVLASTWLLPVAAQDQTKQQPSAVLAPSGETITYQGMLRESGSLANGVFDFQFGLYVDAVGGTALGVVT RNDVTVSNGLFTSELTFSEGLFNGESRWIELAVKADASGSYTTLTPRQQVTAAPLALALPGFWTRQNSFSPNLIGGYEGN TASSLAIGITINGGGNSGGLNSAYDNYSSIGGGAGNSVGSNDGSPSNDVYSTIGGGINNTASQEYIVIGGGQTNNVSGAW STIGGGINNVINNSRYSVIAGGGGTTGNTIYDDYGTIAGGSENIAGLTGEAVSQMYATVGGGRANVASDNYAIVSGGRSN TASDDYSTVAGGYNNSAAAQYATISGGGNSNSAQANRVYDDYGTIGGGTNNVAGVTGDTTGQQYATVGGGNGNTASEDGA TVAGGSGNSASANYTTVAGGTTNAASGDTSSIGGGQLNAASGGYSVVAGGRGNTASSNIAGVGGGQSNQATNTGAYVGGG QTNTATGQYSVVAGGVNNDATNTYASVVGGINNQAAGAGTFVGGGQNNNANSTLSAILGGSGNTTLADYTVAAGENAVAA HAGSFVWAGQQANKDDSISTTGPGQFIVRAPGGAWFGSSTKVDMPDGAILATESGAFLSKGGTWANSSDKNLKSNFATID PQAVLDQLASIPVQAWSYNSEGAAVRHIGPTAQDFYAAFGLGTDDRHIATVDADGVALAGVQGLYNLATEQAQLLDQQAE HMAALDARLAALEHSQNPQTSLPWLWLIAIAAVGLGLGWMLGRRSKGQRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76828; Mature: 76828
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKRYLMLIALVLASTWLLPVAAQDQTKQQPSAVLAPSGETITYQGMLRESGSLANGVF CCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCEE DFQFGLYVDAVGGTALGVVTRNDVTVSNGLFTSELTFSEGLFNGESRWIELAVKADASGS EEEEEEEEEECCCEEEEEEEECCEEEECCEEEEEEEHHCCCCCCCCEEEEEEEEECCCCC YTTLTPRQQVTAAPLALALPGFWTRQNSFSPNLIGGYEGNTASSLAIGITINGGGNSGGL EEEECCCHHHHHCCCEEECCCCEECCCCCCCCEECCCCCCCCCEEEEEEEEECCCCCCCC NSAYDNYSSIGGGAGNSVGSNDGSPSNDVYSTIGGGINNTASQEYIVIGGGQTNNVSGAW CCHHCCHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCH STIGGGINNVINNSRYSVIAGGGGTTGNTIYDDYGTIAGGSENIAGLTGEAVSQMYATVG HHHCCCHHHHHCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCC GGRANVASDNYAIVSGGRSNTASDDYSTVAGGYNNSAAAQYATISGGGNSNSAQANRVYD CCCEEECCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEEC DYGTIGGGTNNVAGVTGDTTGQQYATVGGGNGNTASEDGATVAGGSGNSASANYTTVAGG CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCEEEEECC TTNAASGDTSSIGGGQLNAASGGYSVVAGGRGNTASSNIAGVGGGQSNQATNTGAYVGGG CCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCEECCC QTNTATGQYSVVAGGVNNDATNTYASVVGGINNQAAGAGTFVGGGQNNNANSTLSAILGG CCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEEHEEECC SGNTTLADYTVAAGENAVAAHAGSFVWAGQQANKDDSISTTGPGQFIVRAPGGAWFGSST CCCCEEEEEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC KVDMPDGAILATESGAFLSKGGTWANSSDKNLKSNFATIDPQAVLDQLASIPVQAWSYNS EEECCCCEEEEECCCCEEECCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCEEEEEECC EGAAVRHIGPTAQDFYAAFGLGTDDRHIATVDADGVALAGVQGLYNLATEQAQLLDQQAE CCCEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHH HMAALDARLAALEHSQNPQTSLPWLWLIAIAAVGLGLGWMLGRRSKGQRA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIRKRYLMLIALVLASTWLLPVAAQDQTKQQPSAVLAPSGETITYQGMLRESGSLANGVF CCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCEE DFQFGLYVDAVGGTALGVVTRNDVTVSNGLFTSELTFSEGLFNGESRWIELAVKADASGS EEEEEEEEEECCCEEEEEEEECCEEEECCEEEEEEEHHCCCCCCCCEEEEEEEEECCCCC YTTLTPRQQVTAAPLALALPGFWTRQNSFSPNLIGGYEGNTASSLAIGITINGGGNSGGL EEEECCCHHHHHCCCEEECCCCEECCCCCCCCEECCCCCCCCCEEEEEEEEECCCCCCCC NSAYDNYSSIGGGAGNSVGSNDGSPSNDVYSTIGGGINNTASQEYIVIGGGQTNNVSGAW CCHHCCHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCH STIGGGINNVINNSRYSVIAGGGGTTGNTIYDDYGTIAGGSENIAGLTGEAVSQMYATVG HHHCCCHHHHHCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHCC GGRANVASDNYAIVSGGRSNTASDDYSTVAGGYNNSAAAQYATISGGGNSNSAQANRVYD CCCEEECCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEEC DYGTIGGGTNNVAGVTGDTTGQQYATVGGGNGNTASEDGATVAGGSGNSASANYTTVAGG CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCEEEEECC TTNAASGDTSSIGGGQLNAASGGYSVVAGGRGNTASSNIAGVGGGQSNQATNTGAYVGGG CCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCEECCC QTNTATGQYSVVAGGVNNDATNTYASVVGGINNQAAGAGTFVGGGQNNNANSTLSAILGG CCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEEHEEECC SGNTTLADYTVAAGENAVAAHAGSFVWAGQQANKDDSISTTGPGQFIVRAPGGAWFGSST CCCCEEEEEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC KVDMPDGAILATESGAFLSKGGTWANSSDKNLKSNFATIDPQAVLDQLASIPVQAWSYNS EEECCCCEEEEECCCCEEECCCCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCEEEEEECC EGAAVRHIGPTAQDFYAAFGLGTDDRHIATVDADGVALAGVQGLYNLATEQAQLLDQQAE CCCEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHH HMAALDARLAALEHSQNPQTSLPWLWLIAIAAVGLGLGWMLGRRSKGQRA HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA