| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898712
Identifier: 159898712
GI number: 159898712
Start: 2775689
End: 2776450
Strand: Reverse
Name: 159898712
Synonym: Haur_2191
Alternate gene names: NA
Gene position: 2776450-2775689 (Counterclockwise)
Preceding gene: 159898713
Following gene: 159898704
Centisome position: 43.75
GC content: 54.86
Gene sequence:
>762_bases ATGAAACGTCGTTTGCTCTGGTGGGCGATCCCATTGATCGCGCTTATGCTAGCAGTTCAGCTAGCCCAAGCTCAAACTGG CGGGGTTTTTAGCCTCGATTGGTCAACGATTGATAGCGGCGGTGGCAATAGCACTGGCGGCAATTTTGATCTGCATGGCT CGATTGGTCAGGCCGATGCTAGTGTCGCCCATACTGGTGGCAATTTTAGCGTCGAAGGCGGGTTTTGGTATGGTGTATCA ACATTAACCCCAACGCCGACCAACACACCAACCAACACACCAACCAACACACCAACCAATACACCAACCAACACGCCAAC CAATACACCAACCAACACGCCGACCAACACGCCGACCAACACGCCGACCAACACACCAACCAACACGCCGACCAACACAC CAACCAACACGCCGACCAACACACCAACGGCAACCGCGACGGAAACTAGCACACCAACGAACACACCGACGGAAACCAGC ACACCAACGGCAACCGCGACGAATACACCGACGGAAACCAGCACACCAACGGCAACGGCGACGGCGACCAATACGCCAAC GAACACGCCGACCGCGACAGTAACCGCGACCAATACGCCAACGGAAACCAGCACACCAACCGCGACGGCGACGAATCCAA TTCCTAGCTATACCATTTATCTTCCGCAAACGATGCGGGGAGAAAGCTCGCTGCGCTCAAACAATCCACAGCGCTCGATT ATTCAATCGATTTTGCAGCGCGGTTTCTTGGCCGCAAAGTAA
Upstream 100 bases:
>100_bases ATCCTCAAACCAGTCTCCCATGGTTGTGGTTGATCGCGATTGCCGCAGTTGGATTGGGCTTGGGGTGGATGCTTGGTCGT CGCAGCAAGGGGCAACGCGC
Downstream 100 bases:
>100_bases GCACTAAATTAATAGGGCATGGCGTGAAGCCATGCCCCTCAACATCGCAATCAAATTACCCTGGATTTTGAGAATTTCTG CCGTGCACGAGCCCTATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MKRRLLWWAIPLIALMLAVQLAQAQTGGVFSLDWSTIDSGGGNSTGGNFDLHGSIGQADASVAHTGGNFSVEGGFWYGVS TLTPTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTATATETSTPTNTPTETS TPTATATNTPTETSTPTATATATNTPTNTPTATVTATNTPTETSTPTATATNPIPSYTIYLPQTMRGESSLRSNNPQRSI IQSILQRGFLAAK
Sequences:
>Translated_253_residues MKRRLLWWAIPLIALMLAVQLAQAQTGGVFSLDWSTIDSGGGNSTGGNFDLHGSIGQADASVAHTGGNFSVEGGFWYGVS TLTPTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTATATETSTPTNTPTETS TPTATATNTPTETSTPTATATATNTPTNTPTATVTATNTPTETSTPTATATNPIPSYTIYLPQTMRGESSLRSNNPQRSI IQSILQRGFLAAK >Mature_253_residues MKRRLLWWAIPLIALMLAVQLAQAQTGGVFSLDWSTIDSGGGNSTGGNFDLHGSIGQADASVAHTGGNFSVEGGFWYGVS TLTPTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTATATETSTPTNTPTETS TPTATATNTPTETSTPTATATATNTPTNTPTATVTATNTPTETSTPTATATNPIPSYTIYLPQTMRGESSLRSNNPQRSI IQSILQRGFLAAK
Specific function: Acts as a receptor for hemoglobin or the hemoglobin/haptoglobin complex of the human host and is required for heme uptake [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family. Hemoglobin/haptoglobin binding protein subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR006970 - InterPro: IPR000531 - InterPro: IPR010949 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF04886 PT; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 26213; Mature: 26213
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRLLWWAIPLIALMLAVQLAQAQTGGVFSLDWSTIDSGGGNSTGGNFDLHGSIGQADA CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCC SVAHTGGNFSVEGGFWYGVSTLTPTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTN EEEECCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPTNTPTNTPTNTPTNTPTNTPTATATETSTPTNTPTETSTPTATATNTPTETSTPTATA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE TATNTPTNTPTATVTATNTPTETSTPTATATNPIPSYTIYLPQTMRGESSLRSNNPQRSI EECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCCCHHHH IQSILQRGFLAAK HHHHHHHCCCCCC >Mature Secondary Structure MKRRLLWWAIPLIALMLAVQLAQAQTGGVFSLDWSTIDSGGGNSTGGNFDLHGSIGQADA CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCC SVAHTGGNFSVEGGFWYGVSTLTPTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTNTPTN EEEECCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPTNTPTNTPTNTPTNTPTNTPTATATETSTPTNTPTETSTPTATATNTPTETSTPTATA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE TATNTPTNTPTATVTATNTPTETSTPTATATNPIPSYTIYLPQTMRGESSLRSNNPQRSI EECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCCCHHHH IQSILQRGFLAAK HHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]