| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898699
Identifier: 159898699
GI number: 159898699
Start: 2759833
End: 2761854
Strand: Reverse
Name: 159898699
Synonym: Haur_2178
Alternate gene names: NA
Gene position: 2761854-2759833 (Counterclockwise)
Preceding gene: 159898702
Following gene: 159898698
Centisome position: 43.52
GC content: 49.7
Gene sequence:
>2022_bases ATGAAAAAGTTGAGTAGGCTGATTATTGTTCTTGGTCTTATTTGTAGTATTTTTGCCCAACATTCAGCAACGCCCAAAGC CCAAGCTGCGTTTGGGGCTAGCGATTTTCTCAAGGCCAACGGCGCGACAGTGCGCAATAATTCTGGTAATGGGGCAATCG TCACGCTCAAAGGCACCAACCTCGGCGGTTGGTTGTTGCAAGAAGGCTGGATGTCGCCCTTGGGATATCCCGCTTTACCG CGCACCAGCTGGACTGCCAGCGGATCAGCTGGTGGAGCTGCTGCCGCAATCGATGGCAATCCGGCCACGCGCTGGACGAG CAACGCTCCCCAAGCTAATGGTCAATGGTTCCAAGTCGATCTTGGCGGCAACCAAGCCGTCGAACGGGTGACGATCGACG CTGGCTCCTCAACGGGCGATTATCCGCGCCAATATCAAGTTCAGGCTTTTGTTAATAATGCTTGGCTCACAGTTGGCAGT GGCAGCGGTACAAGCCAAGTGGTAACCGTCCAATTCAATAACACTCAAGTAACCCGCCTGATTCGCGTATTGCAAACTGG CTCAAGCGGCAGTTGGTGGTCAATTCACGAATTCAATGCTCAAATTGCTGATGAATTTAATTTGCGCCAAGCCTTGACCA ACCGCTTTGGCACAAGCACTACCGATAGCTTGATCAACGGCTACCAAGATACTTGGATTCAAGCCAGCGACCTCGATACG ATTAAAGCTATGGGCTTAAACATGGTGCGCGTGCCGATTCATTGGCTGGTGCTGATGAACACTAATGGCACGATGAAATC GGATACTGAATCGTTCCGCAAGCTCGATTGGCTGATTAGTGAAAGTAGCAAGCGCAATTTATATGTGATGCTCGATTTGC ATGGCGCTCCTGGTGCTGCTTGTCCATGGCATTCATGTGGTCAAACTGGCACCAACCAACTCTGGACTAACCCAACCTAC CAAAATTGGACGGTGCAAATTTGGGAACGCTTGGCGACACGCTATCGTGGTAACCCAACTGTGGCCGCCTACGATTTGCT CAACGAGCCATTGCTGAGCAACGGCGCAGCCGAAAACGAGCAACAGGTGCGCCAAAAATTTGATTTCTTTGATCGTTTGT ATGATGCTGTTCGCGCCAAAGACCCCGATCATATGATTGTGATGGCAGCTTTCTATGATTGGTACCAAGCGTTATCGCCT GCAACCTATGGCTGGACGAATGTGATGTATCAATTACACCACTACAACTTTGATACGGTCACTGATTGGAATGTAACCAA TAATTTCATTCAAAGTGCCTTGGATAAATACGCCACCTTCACCAAGGATTGGAATGTGCCTGGCTTTGCTGGCGAATATT GGTTCTCAACTCACTACGATCTGTATGAAAAATTTATGTCTGGCTTGAATGCCTTGAATGTTTCATGGACCAACTGGACA TACAAGGTCAATGGCGGCGGCAACTGGGGCTTCTATCAAAACAATACCCAAGCCGTACCAGATCTATTAAATGATAGTGC TGCCACGATCGCCGATAAATGGTCACGCTTCAGCACCAATTATTTCCAACCAAACACCCAGTTTCAAAATACGGTGCGAG CTTATGCGCCGGAAGGTTCGTGGGTTGCGCTACAAGCTGGAGCCAATAATAGCTATGTTAGCGCCGATAACTATGGCAAC AATCCCTTGGTTGCCAATCGCCCAAGCATCCAAGGCTGGGAAAAATTCCGCATGATCACGAATCCCGATGGGACGGTTTC GTTTATGTCGCTGGCCAACAACAAATATGTGGCCGCCGATTTGAACAACGGTGGGCGCTTGATCGCCCAATCACGCGGGG TATTGGGCTGGGAAAAATTCCGCCGCGTTGATCTTGGCAACGGAACCTTTGGCCTCCAAGCAATCGCTAACAATAAATAT GTCACCACTGATCTGAATAGTGGCTCGCCTATGTTGATTGCCAATCGCGATGCGATCGGCGGCGCATGGGAAGCCTTCAC CTTCGTTGCGACTGCTCCATAG
Upstream 100 bases:
>100_bases TCGTTTCCGGAAACGATACCGAGTTATTCCAACAATTGAGCGCCCGACTTGTCCAAGCAGTGTTGTACGACAGGCAGATC ATCGTTCAAGGAGGAACAGC
Downstream 100 bases:
>100_bases CAGTAGCCTCCTCGCAAGCGCCACCAATGAGCCGATTGGTGGCGCTTCCCCACCTATTAATTAAAGGAGTAGCTGATAAT GAATCGTCAACGCGCCTTGA
Product: coagulation factor 5/8 type domain-containing protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Endoglucanase-Like Protein; Coagulation Factor 5/8 Type Domain-Containing Protein; Endoglucanase; Cellulase; Glycoside Hydrolase; Glucan 1 3-Beta-Glucosidase; Xylan 1 4-Beta-Xylosidase; Protease-Like Protein; Glycoside Hydrolase Family 5 Domain Protein; Peptidase S8 And; Beta-Agarase; Family 5 Glycoside Hydrolase; Serine Protease; Coagulation Factor 5/8 Type Domain Protein; Glucanase; Glucan Exo-13-Beta Glucosidase Glu5A; Cellulase Cel5G; O-Glycosyl Hydrolase Family Protein; Pkd Domain Containing Protein; Metallophosphoesterase; Glycoside Hydrolase Family 3 Domain Protein; Lipolytic Protein G-D-S-L Family
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MKKLSRLIIVLGLICSIFAQHSATPKAQAAFGASDFLKANGATVRNNSGNGAIVTLKGTNLGGWLLQEGWMSPLGYPALP RTSWTASGSAGGAAAAIDGNPATRWTSNAPQANGQWFQVDLGGNQAVERVTIDAGSSTGDYPRQYQVQAFVNNAWLTVGS GSGTSQVVTVQFNNTQVTRLIRVLQTGSSGSWWSIHEFNAQIADEFNLRQALTNRFGTSTTDSLINGYQDTWIQASDLDT IKAMGLNMVRVPIHWLVLMNTNGTMKSDTESFRKLDWLISESSKRNLYVMLDLHGAPGAACPWHSCGQTGTNQLWTNPTY QNWTVQIWERLATRYRGNPTVAAYDLLNEPLLSNGAAENEQQVRQKFDFFDRLYDAVRAKDPDHMIVMAAFYDWYQALSP ATYGWTNVMYQLHHYNFDTVTDWNVTNNFIQSALDKYATFTKDWNVPGFAGEYWFSTHYDLYEKFMSGLNALNVSWTNWT YKVNGGGNWGFYQNNTQAVPDLLNDSAATIADKWSRFSTNYFQPNTQFQNTVRAYAPEGSWVALQAGANNSYVSADNYGN NPLVANRPSIQGWEKFRMITNPDGTVSFMSLANNKYVAADLNNGGRLIAQSRGVLGWEKFRRVDLGNGTFGLQAIANNKY VTTDLNSGSPMLIANRDAIGGAWEAFTFVATAP
Sequences:
>Translated_673_residues MKKLSRLIIVLGLICSIFAQHSATPKAQAAFGASDFLKANGATVRNNSGNGAIVTLKGTNLGGWLLQEGWMSPLGYPALP RTSWTASGSAGGAAAAIDGNPATRWTSNAPQANGQWFQVDLGGNQAVERVTIDAGSSTGDYPRQYQVQAFVNNAWLTVGS GSGTSQVVTVQFNNTQVTRLIRVLQTGSSGSWWSIHEFNAQIADEFNLRQALTNRFGTSTTDSLINGYQDTWIQASDLDT IKAMGLNMVRVPIHWLVLMNTNGTMKSDTESFRKLDWLISESSKRNLYVMLDLHGAPGAACPWHSCGQTGTNQLWTNPTY QNWTVQIWERLATRYRGNPTVAAYDLLNEPLLSNGAAENEQQVRQKFDFFDRLYDAVRAKDPDHMIVMAAFYDWYQALSP ATYGWTNVMYQLHHYNFDTVTDWNVTNNFIQSALDKYATFTKDWNVPGFAGEYWFSTHYDLYEKFMSGLNALNVSWTNWT YKVNGGGNWGFYQNNTQAVPDLLNDSAATIADKWSRFSTNYFQPNTQFQNTVRAYAPEGSWVALQAGANNSYVSADNYGN NPLVANRPSIQGWEKFRMITNPDGTVSFMSLANNKYVAADLNNGGRLIAQSRGVLGWEKFRRVDLGNGTFGLQAIANNKY VTTDLNSGSPMLIANRDAIGGAWEAFTFVATAP >Mature_673_residues MKKLSRLIIVLGLICSIFAQHSATPKAQAAFGASDFLKANGATVRNNSGNGAIVTLKGTNLGGWLLQEGWMSPLGYPALP RTSWTASGSAGGAAAAIDGNPATRWTSNAPQANGQWFQVDLGGNQAVERVTIDAGSSTGDYPRQYQVQAFVNNAWLTVGS GSGTSQVVTVQFNNTQVTRLIRVLQTGSSGSWWSIHEFNAQIADEFNLRQALTNRFGTSTTDSLINGYQDTWIQASDLDT IKAMGLNMVRVPIHWLVLMNTNGTMKSDTESFRKLDWLISESSKRNLYVMLDLHGAPGAACPWHSCGQTGTNQLWTNPTY QNWTVQIWERLATRYRGNPTVAAYDLLNEPLLSNGAAENEQQVRQKFDFFDRLYDAVRAKDPDHMIVMAAFYDWYQALSP ATYGWTNVMYQLHHYNFDTVTDWNVTNNFIQSALDKYATFTKDWNVPGFAGEYWFSTHYDLYEKFMSGLNALNVSWTNWT YKVNGGGNWGFYQNNTQAVPDLLNDSAATIADKWSRFSTNYFQPNTQFQNTVRAYAPEGSWVALQAGANNSYVSADNYGN NPLVANRPSIQGWEKFRMITNPDGTVSFMSLANNKYVAADLNNGGRLIAQSRGVLGWEKFRRVDLGNGTFGLQAIANNKY VTTDLNSGSPMLIANRDAIGGAWEAFTFVATAP
Specific function: Unknown
COG id: COG2730
COG function: function code G; Endoglucanase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320467, Length=253, Percent_Identity=26.4822134387352, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74519; Mature: 74519
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS50022 FA58C_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSRLIIVLGLICSIFAQHSATPKAQAAFGASDFLKANGATVRNNSGNGAIVTLKGTN CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHCCCCEEEECCCCEEEEEEECCC LGGWLLQEGWMSPLGYPALPRTSWTASGSAGGAAAAIDGNPATRWTSNAPQANGQWFQVD CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEE LGGNQAVERVTIDAGSSTGDYPRQYQVQAFVNNAWLTVGSGSGTSQVVTVQFNNTQVTRL CCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCEEEEEECCCCCCEEEEEEECCHHHHHH IRVLQTGSSGSWWSIHEFNAQIADEFNLRQALTNRFGTSTTDSLINGYQDTWIQASDLDT HHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHCEEECCCCHH IKAMGLNMVRVPIHWLVLMNTNGTMKSDTESFRKLDWLISESSKRNLYVMLDLHGAPGAA HHHCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCC CPWHSCGQTGTNQLWTNPTYQNWTVQIWERLATRYRGNPTVAAYDLLNEPLLSNGAAENE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHCCCHHCCCCCCCH QQVRQKFDFFDRLYDAVRAKDPDHMIVMAAFYDWYQALSPATYGWTNVMYQLHHYNFDTV HHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHEEEEECCCCCE TDWNVTNNFIQSALDKYATFTKDWNVPGFAGEYWFSTHYDLYEKFMSGLNALNVSWTNWT ECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCEEEEEEECEE YKVNGGGNWGFYQNNTQAVPDLLNDSAATIADKWSRFSTNYFQPNTQFQNTVRAYAPEGS EEECCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHEECCCCC WVALQAGANNSYVSADNYGNNPLVANRPSIQGWEKFRMITNPDGTVSFMSLANNKYVAAD EEEEEECCCCCEEECCCCCCCCEEECCCCCCCHHHEEEEECCCCCEEEEEECCCEEEEEE LNNGGRLIAQSRGVLGWEKFRRVDLGNGTFGLQAIANNKYVTTDLNSGSPMLIANRDAIG CCCCCEEEEECCCCCCHHHHHEEECCCCCEEEEEEECCCEEEEECCCCCEEEEECCCCCC GAWEAFTFVATAP CCEEEEEEEEECC >Mature Secondary Structure MKKLSRLIIVLGLICSIFAQHSATPKAQAAFGASDFLKANGATVRNNSGNGAIVTLKGTN CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHCCCCEEEECCCCEEEEEEECCC LGGWLLQEGWMSPLGYPALPRTSWTASGSAGGAAAAIDGNPATRWTSNAPQANGQWFQVD CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEE LGGNQAVERVTIDAGSSTGDYPRQYQVQAFVNNAWLTVGSGSGTSQVVTVQFNNTQVTRL CCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCEEEEEECCCCCCEEEEEEECCHHHHHH IRVLQTGSSGSWWSIHEFNAQIADEFNLRQALTNRFGTSTTDSLINGYQDTWIQASDLDT HHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHCEEECCCCHH IKAMGLNMVRVPIHWLVLMNTNGTMKSDTESFRKLDWLISESSKRNLYVMLDLHGAPGAA HHHCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCC CPWHSCGQTGTNQLWTNPTYQNWTVQIWERLATRYRGNPTVAAYDLLNEPLLSNGAAENE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEHHHHCCCHHCCCCCCCH QQVRQKFDFFDRLYDAVRAKDPDHMIVMAAFYDWYQALSPATYGWTNVMYQLHHYNFDTV HHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHEEEEECCCCCE TDWNVTNNFIQSALDKYATFTKDWNVPGFAGEYWFSTHYDLYEKFMSGLNALNVSWTNWT ECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCHHHHHHHHCCCCEEEEEEECEE YKVNGGGNWGFYQNNTQAVPDLLNDSAATIADKWSRFSTNYFQPNTQFQNTVRAYAPEGS EEECCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHEECCCCC WVALQAGANNSYVSADNYGNNPLVANRPSIQGWEKFRMITNPDGTVSFMSLANNKYVAAD EEEEEECCCCCEEECCCCCCCCEEECCCCCCCHHHEEEEECCCCCEEEEEECCCEEEEEE LNNGGRLIAQSRGVLGWEKFRRVDLGNGTFGLQAIANNKYVTTDLNSGSPMLIANRDAIG CCCCCEEEEECCCCCCHHHHHEEECCCCCEEEEEEECCCEEEEECCCCCEEEEECCCCCC GAWEAFTFVATAP CCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA