Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159898702

Identifier: 159898702

GI number: 159898702

Start: 2763374

End: 2765080

Strand: Reverse

Name: 159898702

Synonym: Haur_2181

Alternate gene names: NA

Gene position: 2765080-2763374 (Counterclockwise)

Preceding gene: 159898703

Following gene: 159898699

Centisome position: 43.57

GC content: 47.63

Gene sequence:

>1707_bases
ATGTGGTTCATGAGTCAGCGGCGCTTCAAAATTATTATATGGCTCCTCTTTTTGCTCATCCTTGGTCAATGTGGCTGGTG
GGGAGTTGGTCGGGTTGCCTGGCTTGTCGCTAGCTTCCAGCAAGGTGCCGACCCTGCTAGTGCCCTAAAATTGCCACCCA
TGTTGCCGCCCGAAGCCGCAATCGCAACACAGTGGCTGCCTGACGACCCCGACACTGGTCGTGTGATGGAAGATTTTACT
CGCCAACAACTGACCAGCGATTATGGTCGAGCGTGGCTCCAATGGAATCTTTCCTTGAAGATTGGCCGTCCCTACAATTT
ACACACCAGTTTTAGTGGGCCAGCCTTGCATTATCTCACGACTAGTATCAGCACGACTGAGAATATAAAGATCGATCAAA
TTGATACAGCCCACCAATTACAACTGCATTTCTATGCAGCAGATGGCTCAATTGTAGCTCTGACCGATACCCAAGCCGAG
ATCTATCAGATGATCTATGATGCTGACGGGGAAATAGTATCGGCTCAATGGTTGTATGCACGCTATGAGATTGTGATGCT
GTTGCAAGATGGCACATGGCGAATTCGGCATTGGGTTCGCCACGAACTGCCAACCCCGATAGAACCCTCGTATCAACCAA
GGCCTCAACTGTTGCAGGTTAATCAGCAACAGTTACAACTTGCCGATCAGCCTTTTATCGCCCGAGGCGTTAATTATTAT
CCTTCTAAAACTCCATGGCTACAATTTTGGCCTGCCTATCAACCCCAACAAACGACAAAAGATCTCGCGTTAGTTCAACA
ACTAAATTTGAATAGTGTGCGGATTTTCATTCCGTTTGAGCAATTTACCGAACCCTATAGCACAAGTCTCTATCTACGTT
CTGTGACCGATTTTCTGGATCAGGCTGATCAAGCGAACATCAAGGTCATTGTCACCTTATTCGATTTTTTAGGCGATTAT
CAGCTGGCACGCTGGCAAGCAACCGACAGCTATTTAACAACCGTGGTAACTGCATTACGAGAACATCCGGCGATTATGGC
ATGGGATGTTAAAAACGAGCCAGATCGTGATTATGCAACTGCTAGTCAGGTAGTGGTTGAGGCATGGCTCCAGCATAGCA
TCCGCCAGCTTCGTCGGCTTGATCCCCATCATCTGATTACGATTGGCTGGTCTACACCTGAAGCTGCTGAACGGTTATAT
CAAGATGTCGATTTGGTCTCGTTTCATTACTATGGATCAACTGAACTATTGGCAACCCACTATCAACGCCTCAGACAGGT
AGTTGGCGAGAAACCGCTCCTGTTAACTGAGATTGGGATGCCAACCTGGAATAGCCCATTTTTTCCTCATGGCCACAACC
AGCGTGAGCAAGCAAACTACTTAACGGGATTAATGCAACAAGCCGAAGCCTATAATGGTTTTTTGATCTGGACACTCTTC
GATATTCCTGAGGTTCCAAAGGCTGTTGCTGGGTTTTGGCCATGGCAACGTGGCCCGCAAACCCAATTAGGACTCTATAA
CGAGACCTATGAACCAAAATTAATCAGCAAAGTGTTGTTGGGGCTTGAGCCTAGCCCGTTTATTCGCTGGTGGGAGGCGT
GGCTCAAGCCGTTTCGAATAACGCTTATCGTGCTAAGCATGCTTGGATTAATCGGAGGATGGCAGGGTTATCGCCGCTGG
AAACGCAAAAAACACCCAAAGATTTAA

Upstream 100 bases:

>100_bases
ATCCGGCGATCGTTGTTGCCAGCAGGTCGTTATACCCTGATCTGCCGGGTTGGCGATAAACAAGCCAAATTATTGCTGGT
AGTTCCTTGATACAAATGAG

Downstream 100 bases:

>100_bases
GGCAAAAGCGTTAATCGGATAATCGCCTGCCCTGAGCGCTGCATTGCCCGTTTGTTTACATCGGCAATCCATTTAATTAA
AAGATTTGCTAATTTTGGGT

Product: putative glycosyl hydrolase

Products: NA

Alternate protein names: Glycosidase; Cellulase

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MWFMSQRRFKIIIWLLFLLILGQCGWWGVGRVAWLVASFQQGADPASALKLPPMLPPEAAIATQWLPDDPDTGRVMEDFT
RQQLTSDYGRAWLQWNLSLKIGRPYNLHTSFSGPALHYLTTSISTTENIKIDQIDTAHQLQLHFYAADGSIVALTDTQAE
IYQMIYDADGEIVSAQWLYARYEIVMLLQDGTWRIRHWVRHELPTPIEPSYQPRPQLLQVNQQQLQLADQPFIARGVNYY
PSKTPWLQFWPAYQPQQTTKDLALVQQLNLNSVRIFIPFEQFTEPYSTSLYLRSVTDFLDQADQANIKVIVTLFDFLGDY
QLARWQATDSYLTTVVTALREHPAIMAWDVKNEPDRDYATASQVVVEAWLQHSIRQLRRLDPHHLITIGWSTPEAAERLY
QDVDLVSFHYYGSTELLATHYQRLRQVVGEKPLLLTEIGMPTWNSPFFPHGHNQREQANYLTGLMQQAEAYNGFLIWTLF
DIPEVPKAVAGFWPWQRGPQTQLGLYNETYEPKLISKVLLGLEPSPFIRWWEAWLKPFRITLIVLSMLGLIGGWQGYRRW
KRKKHPKI

Sequences:

>Translated_568_residues
MWFMSQRRFKIIIWLLFLLILGQCGWWGVGRVAWLVASFQQGADPASALKLPPMLPPEAAIATQWLPDDPDTGRVMEDFT
RQQLTSDYGRAWLQWNLSLKIGRPYNLHTSFSGPALHYLTTSISTTENIKIDQIDTAHQLQLHFYAADGSIVALTDTQAE
IYQMIYDADGEIVSAQWLYARYEIVMLLQDGTWRIRHWVRHELPTPIEPSYQPRPQLLQVNQQQLQLADQPFIARGVNYY
PSKTPWLQFWPAYQPQQTTKDLALVQQLNLNSVRIFIPFEQFTEPYSTSLYLRSVTDFLDQADQANIKVIVTLFDFLGDY
QLARWQATDSYLTTVVTALREHPAIMAWDVKNEPDRDYATASQVVVEAWLQHSIRQLRRLDPHHLITIGWSTPEAAERLY
QDVDLVSFHYYGSTELLATHYQRLRQVVGEKPLLLTEIGMPTWNSPFFPHGHNQREQANYLTGLMQQAEAYNGFLIWTLF
DIPEVPKAVAGFWPWQRGPQTQLGLYNETYEPKLISKVLLGLEPSPFIRWWEAWLKPFRITLIVLSMLGLIGGWQGYRRW
KRKKHPKI
>Mature_568_residues
MWFMSQRRFKIIIWLLFLLILGQCGWWGVGRVAWLVASFQQGADPASALKLPPMLPPEAAIATQWLPDDPDTGRVMEDFT
RQQLTSDYGRAWLQWNLSLKIGRPYNLHTSFSGPALHYLTTSISTTENIKIDQIDTAHQLQLHFYAADGSIVALTDTQAE
IYQMIYDADGEIVSAQWLYARYEIVMLLQDGTWRIRHWVRHELPTPIEPSYQPRPQLLQVNQQQLQLADQPFIARGVNYY
PSKTPWLQFWPAYQPQQTTKDLALVQQLNLNSVRIFIPFEQFTEPYSTSLYLRSVTDFLDQADQANIKVIVTLFDFLGDY
QLARWQATDSYLTTVVTALREHPAIMAWDVKNEPDRDYATASQVVVEAWLQHSIRQLRRLDPHHLITIGWSTPEAAERLY
QDVDLVSFHYYGSTELLATHYQRLRQVVGEKPLLLTEIGMPTWNSPFFPHGHNQREQANYLTGLMQQAEAYNGFLIWTLF
DIPEVPKAVAGFWPWQRGPQTQLGLYNETYEPKLISKVLLGLEPSPFIRWWEAWLKPFRITLIVLSMLGLIGGWQGYRRW
KRKKHPKI

Specific function: Unknown

COG id: COG3934

COG function: function code G; Endo-beta-mannanase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66060; Mature: 66060

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFMSQRRFKIIIWLLFLLILGQCGWWGVGRVAWLVASFQQGADPASALKLPPMLPPEAA
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHH
IATQWLPDDPDTGRVMEDFTRQQLTSDYGRAWLQWNLSLKIGRPYNLHTSFSGPALHYLT
HHHCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCEEECCCCCCCEEEEEE
TSISTTENIKIDQIDTAHQLQLHFYAADGSIVALTDTQAEIYQMIYDADGEIVSAQWLYA
ECCCCCCCEEEECCCCCEEEEEEEEECCCCEEEEECCHHHHHHHHHCCCCCEEEHHHHEE
RYEIVMLLQDGTWRIRHWVRHELPTPIEPSYQPRPQLLQVNQQQLQLADQPFIARGVNYY
EEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHCCCCHHHCCCCCC
PSKTPWLQFWPAYQPQQTTKDLALVQQLNLNSVRIFIPFEQFTEPYSTSLYLRSVTDFLD
CCCCCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHH
QADQANIKVIVTLFDFLGDYQLARWQATDSYLTTVVTALREHPAIMAWDVKNEPDRDYAT
CCCCCCCEEHEEHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHH
ASQVVVEAWLQHSIRQLRRLDPHHLITIGWSTPEAAERLYQDVDLVSFHYYGSTELLATH
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEECCCHHHHHHH
YQRLRQVVGEKPLLLTEIGMPTWNSPFFPHGHNQREQANYLTGLMQQAEAYNGFLIWTLF
HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
DIPEVPKAVAGFWPWQRGPQTQLGLYNETYEPKLISKVLLGLEPSPFIRWWEAWLKPFRI
CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
TLIVLSMLGLIGGWQGYRRWKRKKHPKI
HHHHHHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MWFMSQRRFKIIIWLLFLLILGQCGWWGVGRVAWLVASFQQGADPASALKLPPMLPPEAA
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHH
IATQWLPDDPDTGRVMEDFTRQQLTSDYGRAWLQWNLSLKIGRPYNLHTSFSGPALHYLT
HHHCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCEEECCCCCCCEEEEEE
TSISTTENIKIDQIDTAHQLQLHFYAADGSIVALTDTQAEIYQMIYDADGEIVSAQWLYA
ECCCCCCCEEEECCCCCEEEEEEEEECCCCEEEEECCHHHHHHHHHCCCCCEEEHHHHEE
RYEIVMLLQDGTWRIRHWVRHELPTPIEPSYQPRPQLLQVNQQQLQLADQPFIARGVNYY
EEEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHCCCCHHHCCCCCC
PSKTPWLQFWPAYQPQQTTKDLALVQQLNLNSVRIFIPFEQFTEPYSTSLYLRSVTDFLD
CCCCCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCHHHHHHHHHHHHH
QADQANIKVIVTLFDFLGDYQLARWQATDSYLTTVVTALREHPAIMAWDVKNEPDRDYAT
CCCCCCCEEHEEHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHH
ASQVVVEAWLQHSIRQLRRLDPHHLITIGWSTPEAAERLYQDVDLVSFHYYGSTELLATH
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEECCCHHHHHHH
YQRLRQVVGEKPLLLTEIGMPTWNSPFFPHGHNQREQANYLTGLMQQAEAYNGFLIWTLF
HHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
DIPEVPKAVAGFWPWQRGPQTQLGLYNETYEPKLISKVLLGLEPSPFIRWWEAWLKPFRI
CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
TLIVLSMLGLIGGWQGYRRWKRKKHPKI
HHHHHHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA