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The map label for this gene is chiA1 [H]

Identifier: 159898698

GI number: 159898698

Start: 2758018

End: 2759754

Strand: Reverse

Name: chiA1 [H]

Synonym: Haur_2177

Alternate gene names: 159898698

Gene position: 2759754-2758018 (Counterclockwise)

Preceding gene: 159898699

Following gene: 159898697

Centisome position: 43.48

GC content: 51.41

Gene sequence:

>1737_bases
ATGAATCGTCAACGCGCCTTGAGCATGAAGGTTTATTTGCTGTTGGCTCTGATCATGCTGGCTGGGAGTTTTGGTGCTGG
ATTTGATCAACCCAAATCAGCCCAAGCCCAAATCGCCTATAAAATTGTGGGCTATTTGCCATCGTGGCAAGGCAGTGTCA
ACGGCACTCAAATTGATAAACTGACCCACATTAACTATGCTTTTCTGTTGCCCAACAACGATGGCAGCCTCAAGCCAATC
GAAAACTCCAGCAAATTGCAAGAGTTGGTATCGGTCGCTCATAGCAAAAACAAAAAAGTGCTAATTTCAGTTGGTGGCTG
GAACGACGGCGATGATAGTGCCTTCGAAAGTATCGCCGCCAACGCCAGCTATCGCACGAATTTTGCCAATAACCTCAATA
ATTTCGTCAACCAATATAATCTCGATGGGGTTGATATTGATTGGGAATATCCTGAGGCTGGCGATTTTTACTTTGAAACG
ATGTCGGCGATCCGCAATCGCATCGGCTCGGGCAAATTATTAACTGCGGCAGTCGCTGCAACCAATGCTGGCGGCTCAGG
CGTAACTAGCAATGCCATCGAAATTATGGATTACATCACGCTCATGGCCTACGATGGTGATGGCGGCGCTGGTCATTCGC
CCTATAGTTTAGCTCAGCAATCGCTCGATTATTGGGGCACCAAAACTAGCAATAAGGCTAAATTAATCTTGGGCGTGCCG
TTTTATGCTCGCCCAGGCTGGTATGGCTACAACACCTTACGCGCTGGTGGTTGCTCAGCCGATAGCGATAGCTGCTGGTA
TGGCGGCGCAACCCAATACTACACGGGCCGCCCAACCATGCGCGCCAAAATCGATTTGATGAAAAGCAAGGGCGGCGGTG
GGATTATGATTTGGGAATTGAGCCAAGATACGGCTGTTACCAGCAGCGATTCCTTGCTCAAAACCATTGCCGATCAGCTT
GGCACACCCAGCACGCCAACTGGCAATTTAGCCCTGAACAAAGCCGCTACTGCTTCATCAACCGAAAATAGCAGCTATGG
CGCAAATCTCGCGTTCGATGGCAACAGCTCCACCCGTTGGTCGAGCACATGGAGCGATCCACAATGGCTACAGGTTGATT
TAGGCGCGGTGTATGCGATCAAACAAGTGGTTTTAAAATGGGAAGCCGCCTTTGGCCGCGCCTATCAAGTGCAAGTTTCC
AACGATGGCAATACCTGGCGCTCGATCTATAGTACAACCAATAGCGATGGCGCAACCGATGATTTAGCAGTTTCCGGCAT
TGGGCGCTATCTGCGCGTCTACGCCACAACTCGCGCCACCGAGTGGGGCTACTCGCTCTGGGAAGTCGAGGTTTATGGCA
ATGCGTTGGCAACCAGCGCTTCATCGACCGAAGCAGGCGGCAGCACGACCAACGCGATTGATACTAACGGCACTACTCGT
TGGAGCGCAGGCTTGCCCCAAGCAGCAGGCCAGTGGTATCGGGTCGATTTTGGCAATAACCAAAGTTTCAGCCAAATCAC
GCTTGATGCAGGCCCATCCTACGGCGATTATCCACGCAACTTCCAAGTGCAAGTTTCCAACGATGGCAATAGCTGGGCAA
CCGTAGCTACTGCCACTGGTACAACCCAAGCAGTAACCGTCAACTTCGCTGCTCAAAATAGCCGTTATCTGCGGGTATGG
CTCACCAGCACTGGCGGCGGCAGTTGGTGGTCGATCCACGAATTAACCGTGCGCTAA

Upstream 100 bases:

>100_bases
CTTCGTTGCGACTGCTCCATAGCAGTAGCCTCCTCGCAAGCGCCACCAATGAGCCGATTGGTGGCGCTTCCCCACCTATT
AATTAAAGGAGTAGCTGATA

Downstream 100 bases:

>100_bases
ACTCCGAGGGGTCAGCAGTCAGGAGCCAGAGGTCAGGGTTGATATTTTATTAACCACGAAGAGCGCGAAGGTCACGAAGC
TATCGTGATTAATTTAACCA

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MNRQRALSMKVYLLLALIMLAGSFGAGFDQPKSAQAQIAYKIVGYLPSWQGSVNGTQIDKLTHINYAFLLPNNDGSLKPI
ENSSKLQELVSVAHSKNKKVLISVGGWNDGDDSAFESIAANASYRTNFANNLNNFVNQYNLDGVDIDWEYPEAGDFYFET
MSAIRNRIGSGKLLTAAVAATNAGGSGVTSNAIEIMDYITLMAYDGDGGAGHSPYSLAQQSLDYWGTKTSNKAKLILGVP
FYARPGWYGYNTLRAGGCSADSDSCWYGGATQYYTGRPTMRAKIDLMKSKGGGGIMIWELSQDTAVTSSDSLLKTIADQL
GTPSTPTGNLALNKAATASSTENSSYGANLAFDGNSSTRWSSTWSDPQWLQVDLGAVYAIKQVVLKWEAAFGRAYQVQVS
NDGNTWRSIYSTTNSDGATDDLAVSGIGRYLRVYATTRATEWGYSLWEVEVYGNALATSASSTEAGGSTTNAIDTNGTTR
WSAGLPQAAGQWYRVDFGNNQSFSQITLDAGPSYGDYPRNFQVQVSNDGNSWATVATATGTTQAVTVNFAAQNSRYLRVW
LTSTGGGSWWSIHELTVR

Sequences:

>Translated_578_residues
MNRQRALSMKVYLLLALIMLAGSFGAGFDQPKSAQAQIAYKIVGYLPSWQGSVNGTQIDKLTHINYAFLLPNNDGSLKPI
ENSSKLQELVSVAHSKNKKVLISVGGWNDGDDSAFESIAANASYRTNFANNLNNFVNQYNLDGVDIDWEYPEAGDFYFET
MSAIRNRIGSGKLLTAAVAATNAGGSGVTSNAIEIMDYITLMAYDGDGGAGHSPYSLAQQSLDYWGTKTSNKAKLILGVP
FYARPGWYGYNTLRAGGCSADSDSCWYGGATQYYTGRPTMRAKIDLMKSKGGGGIMIWELSQDTAVTSSDSLLKTIADQL
GTPSTPTGNLALNKAATASSTENSSYGANLAFDGNSSTRWSSTWSDPQWLQVDLGAVYAIKQVVLKWEAAFGRAYQVQVS
NDGNTWRSIYSTTNSDGATDDLAVSGIGRYLRVYATTRATEWGYSLWEVEVYGNALATSASSTEAGGSTTNAIDTNGTTR
WSAGLPQAAGQWYRVDFGNNQSFSQITLDAGPSYGDYPRNFQVQVSNDGNSWATVATATGTTQAVTVNFAAQNSRYLRVW
LTSTGGGSWWSIHELTVR
>Mature_578_residues
MNRQRALSMKVYLLLALIMLAGSFGAGFDQPKSAQAQIAYKIVGYLPSWQGSVNGTQIDKLTHINYAFLLPNNDGSLKPI
ENSSKLQELVSVAHSKNKKVLISVGGWNDGDDSAFESIAANASYRTNFANNLNNFVNQYNLDGVDIDWEYPEAGDFYFET
MSAIRNRIGSGKLLTAAVAATNAGGSGVTSNAIEIMDYITLMAYDGDGGAGHSPYSLAQQSLDYWGTKTSNKAKLILGVP
FYARPGWYGYNTLRAGGCSADSDSCWYGGATQYYTGRPTMRAKIDLMKSKGGGGIMIWELSQDTAVTSSDSLLKTIADQL
GTPSTPTGNLALNKAATASSTENSSYGANLAFDGNSSTRWSSTWSDPQWLQVDLGAVYAIKQVVLKWEAAFGRAYQVQVS
NDGNTWRSIYSTTNSDGATDDLAVSGIGRYLRVYATTRATEWGYSLWEVEVYGNALATSASSTEAGGSTTNAIDTNGTTR
WSAGLPQAAGQWYRVDFGNNQSFSQITLDAGPSYGDYPRNFQVQVSNDGNSWATVATATGTTQAVTVNFAAQNSRYLRVW
LTSTGGGSWWSIHELTVR

Specific function: Unknown

COG id: COG3325

COG function: function code G; Chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 fibronectin type-III domains [H]

Homologues:

Organism=Homo sapiens, GI4502809, Length=399, Percent_Identity=26.5664160401003, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI144226251, Length=342, Percent_Identity=25.1461988304094, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI68533253, Length=357, Percent_Identity=22.4089635854342, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI133893286, Length=251, Percent_Identity=27.4900398406374, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17563680, Length=261, Percent_Identity=29.1187739463602, Blast_Score=88, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17559362, Length=288, Percent_Identity=27.0833333333333, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71995504, Length=249, Percent_Identity=28.5140562248996, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI72000004, Length=375, Percent_Identity=24.5333333333333, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71993650, Length=276, Percent_Identity=24.2753623188406, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17536195, Length=229, Percent_Identity=24.4541484716157, Blast_Score=73, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI32564165, Length=237, Percent_Identity=24.8945147679325, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115533992, Length=213, Percent_Identity=25.8215962441315, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17551250, Length=298, Percent_Identity=28.1879194630872, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115532450, Length=251, Percent_Identity=24.7011952191235, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17531695, Length=248, Percent_Identity=23.3870967741935, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17535567, Length=236, Percent_Identity=24.1525423728814, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17531693, Length=237, Percent_Identity=25.3164556962025, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17531689, Length=119, Percent_Identity=32.7731092436975, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI116007452, Length=414, Percent_Identity=24.8792270531401, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI45550474, Length=439, Percent_Identity=27.5626423690205, Blast_Score=91, Evalue=3e-18,
Organism=Drosophila melanogaster, GI22024049, Length=335, Percent_Identity=26.865671641791, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28573679, Length=334, Percent_Identity=26.3473053892216, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24655584, Length=274, Percent_Identity=25.9124087591241, Blast_Score=80, Evalue=5e-15,
Organism=Drosophila melanogaster, GI21358195, Length=286, Percent_Identity=27.972027972028, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221330815, Length=341, Percent_Identity=25.2199413489736, Blast_Score=73, Evalue=7e-13,
Organism=Drosophila melanogaster, GI161077700, Length=331, Percent_Identity=25.9818731117825, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221329807, Length=331, Percent_Identity=25.9818731117825, Blast_Score=70, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR011583
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR001223
- InterPro:   IPR001579
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 62285; Mature: 62285

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS50022 FA58C_3 ; PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQRALSMKVYLLLALIMLAGSFGAGFDQPKSAQAQIAYKIVGYLPSWQGSVNGTQIDK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEEEEECCCCCCCCCCCEEEE
LTHINYAFLLPNNDGSLKPIENSSKLQELVSVAHSKNKKVLISVGGWNDGDDSAFESIAA
EEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHC
NASYRTNFANNLNNFVNQYNLDGVDIDWEYPEAGDFYFETMSAIRNRIGSGKLLTAAVAA
CCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEE
TNAGGSGVTSNAIEIMDYITLMAYDGDGGAGHSPYSLAQQSLDYWGTKTSNKAKLILGVP
CCCCCCCCCHHHHHHEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECC
FYARPGWYGYNTLRAGGCSADSDSCWYGGATQYYTGRPTMRAKIDLMKSKGGGGIMIWEL
CEECCCCCCCCCEECCCCCCCCCCCEECCCCCEEECCCCEEEEEEEEECCCCCEEEEEEE
SQDTAVTSSDSLLKTIADQLGTPSTPTGNLALNKAATASSTENSSYGANLAFDGNSSTRW
CCCCEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCC
SSTWSDPQWLQVDLGAVYAIKQVVLKWEAAFGRAYQVQVSNDGNTWRSIYSTTNSDGATD
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHEECCCCCCCCC
DLAVSGIGRYLRVYATTRATEWGYSLWEVEVYGNALATSASSTEAGGSTTNAIDTNGTTR
HHHHHHHCCEEEEEEEECCCCCCCEEEEEEEECCEEECCCCCCCCCCCCCCEECCCCCEE
WSAGLPQAAGQWYRVDFGNNQSFSQITLDAGPSYGDYPRNFQVQVSNDGNSWATVATATG
ECCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECC
TTQAVTVNFAAQNSRYLRVWLTSTGGGSWWSIHELTVR
CCEEEEEEEEECCCEEEEEEEEECCCCCEEEEEEEEEC
>Mature Secondary Structure
MNRQRALSMKVYLLLALIMLAGSFGAGFDQPKSAQAQIAYKIVGYLPSWQGSVNGTQIDK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEEEEEEECCCCCCCCCCCEEEE
LTHINYAFLLPNNDGSLKPIENSSKLQELVSVAHSKNKKVLISVGGWNDGDDSAFESIAA
EEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHC
NASYRTNFANNLNNFVNQYNLDGVDIDWEYPEAGDFYFETMSAIRNRIGSGKLLTAAVAA
CCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEE
TNAGGSGVTSNAIEIMDYITLMAYDGDGGAGHSPYSLAQQSLDYWGTKTSNKAKLILGVP
CCCCCCCCCHHHHHHEEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECC
FYARPGWYGYNTLRAGGCSADSDSCWYGGATQYYTGRPTMRAKIDLMKSKGGGGIMIWEL
CEECCCCCCCCCEECCCCCCCCCCCEECCCCCEEECCCCEEEEEEEEECCCCCEEEEEEE
SQDTAVTSSDSLLKTIADQLGTPSTPTGNLALNKAATASSTENSSYGANLAFDGNSSTRW
CCCCEECCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCCC
SSTWSDPQWLQVDLGAVYAIKQVVLKWEAAFGRAYQVQVSNDGNTWRSIYSTTNSDGATD
CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHEECCCCCCCCC
DLAVSGIGRYLRVYATTRATEWGYSLWEVEVYGNALATSASSTEAGGSTTNAIDTNGTTR
HHHHHHHCCEEEEEEEECCCCCCCEEEEEEEECCEEECCCCCCCCCCCCCCEECCCCCEE
WSAGLPQAAGQWYRVDFGNNQSFSQITLDAGPSYGDYPRNFQVQVSNDGNSWATVATATG
ECCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEECC
TTQAVTVNFAAQNSRYLRVWLTSTGGGSWWSIHELTVR
CCEEEEEEEEECCCEEEEEEEEECCCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2203782; 8103047 [H]