| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898568
Identifier: 159898568
GI number: 159898568
Start: 2555106
End: 2555873
Strand: Direct
Name: 159898568
Synonym: Haur_2044
Alternate gene names: NA
Gene position: 2555106-2555873 (Clockwise)
Preceding gene: 159898567
Following gene: 159898569
Centisome position: 40.26
GC content: 57.81
Gene sequence:
>768_bases ATGGATAAACCGTACCTGATTGAACAGATTGGCCGCGCGGCCTTTCAGCGTGCATGTACCCAAGCCCGGAACGCCGCCCC AGCTATGGGCACGCGCACCCAATCACAATCCTATCATTCCCCCCTCCCACAGTGGATCGATAGGATGATTTGGGAGCAGG CCGATGGCTTAACCACGGCGCAACGGCTCCGGCTCAGCGTTTCCATGTATCGTGATCTGCCATGTTATGGGGTTCTTCTG GGGCTGATGTGCCGCTACCAAGGCCTGGATCGAGTGCACCAAAAGCTCTATTGGTTTGAGGTGCGCCGGATGCTCTCCCA CGGCGATCCGGCATGGTCGGGACCGATCGAATATCACCTGGCGCTCGATTGGTTTGAACGCAATGATGACGGTGCGACCA TCTGGCAGACCCTGCGTCGGGCAGCGAATCCGGCATTGCTTCGGAGTCTTCTCCGGAGTTCCGGGCCAGCGGCGTGGTCG TTAAAAATGGCGCTCTATCGGGAATTACTGGCCGATCCGGCGTGGCATGCGGCGATTTATGCGAGCGTGCTTGCGAGCTA TGGTGGGGTGTATGGGCAAATTGATCGGGTTGAGGCGCTCACCGTGCTCCATCATTTAATACTTCCGCATCGGGATGACG CGGAATGGCGTTCCATGCTCACAGTCCTTGGGCACGGTGACCGCTACACGAATGGCTTTGGAGTAAAAGCGTTCCATGCC CCACAGCAAGACGATGAAGGATCAGGCGATCAAGCACACCGTGGGTGA
Upstream 100 bases:
>100_bases TGATGGTGCCGTGCAGCGCGTCACCGGGATTGCCGTACTGGTCATTGATGCCCTTGCCCAGCCTGCACCTGCATGAGCGC GAGCTACCTATGGAGTCGAG
Downstream 100 bases:
>100_bases CGGAACGTGGGCGACATCAGCTAGCCTGTTGGAGCGCATAAAAAGACAGGTGCATGAACTGCTTTGGCGAACAACAGCAC AGCACACGGCGATGTACTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MDKPYLIEQIGRAAFQRACTQARNAAPAMGTRTQSQSYHSPLPQWIDRMIWEQADGLTTAQRLRLSVSMYRDLPCYGVLL GLMCRYQGLDRVHQKLYWFEVRRMLSHGDPAWSGPIEYHLALDWFERNDDGATIWQTLRRAANPALLRSLLRSSGPAAWS LKMALYRELLADPAWHAAIYASVLASYGGVYGQIDRVEALTVLHHLILPHRDDAEWRSMLTVLGHGDRYTNGFGVKAFHA PQQDDEGSGDQAHRG
Sequences:
>Translated_255_residues MDKPYLIEQIGRAAFQRACTQARNAAPAMGTRTQSQSYHSPLPQWIDRMIWEQADGLTTAQRLRLSVSMYRDLPCYGVLL GLMCRYQGLDRVHQKLYWFEVRRMLSHGDPAWSGPIEYHLALDWFERNDDGATIWQTLRRAANPALLRSLLRSSGPAAWS LKMALYRELLADPAWHAAIYASVLASYGGVYGQIDRVEALTVLHHLILPHRDDAEWRSMLTVLGHGDRYTNGFGVKAFHA PQQDDEGSGDQAHRG >Mature_255_residues MDKPYLIEQIGRAAFQRACTQARNAAPAMGTRTQSQSYHSPLPQWIDRMIWEQADGLTTAQRLRLSVSMYRDLPCYGVLL GLMCRYQGLDRVHQKLYWFEVRRMLSHGDPAWSGPIEYHLALDWFERNDDGATIWQTLRRAANPALLRSLLRSSGPAAWS LKMALYRELLADPAWHAAIYASVLASYGGVYGQIDRVEALTVLHHLILPHRDDAEWRSMLTVLGHGDRYTNGFGVKAFHA PQQDDEGSGDQAHRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28947; Mature: 28947
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKPYLIEQIGRAAFQRACTQARNAAPAMGTRTQSQSYHSPLPQWIDRMIWEQADGLTTA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHH QRLRLSVSMYRDLPCYGVLLGLMCRYQGLDRVHQKLYWFEVRRMLSHGDPAWSGPIEYHL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE ALDWFERNDDGATIWQTLRRAANPALLRSLLRSSGPAAWSLKMALYRELLADPAWHAAIY EEEHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH ASVLASYGGVYGQIDRVEALTVLHHLILPHRDDAEWRSMLTVLGHGDRYTNGFGVKAFHA HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECC PQQDDEGSGDQAHRG CCCCCCCCCCCCCCC >Mature Secondary Structure MDKPYLIEQIGRAAFQRACTQARNAAPAMGTRTQSQSYHSPLPQWIDRMIWEQADGLTTA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHH QRLRLSVSMYRDLPCYGVLLGLMCRYQGLDRVHQKLYWFEVRRMLSHGDPAWSGPIEYHL HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE ALDWFERNDDGATIWQTLRRAANPALLRSLLRSSGPAAWSLKMALYRELLADPAWHAAIY EEEHHHCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHH ASVLASYGGVYGQIDRVEALTVLHHLILPHRDDAEWRSMLTVLGHGDRYTNGFGVKAFHA HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEECC PQQDDEGSGDQAHRG CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA