| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898569
Identifier: 159898569
GI number: 159898569
Start: 2556632
End: 2557792
Strand: Direct
Name: 159898569
Synonym: Haur_2045
Alternate gene names: NA
Gene position: 2556632-2557792 (Clockwise)
Preceding gene: 159898568
Following gene: 159898573
Centisome position: 40.28
GC content: 57.54
Gene sequence:
>1161_bases ATGACTCCCATTAATAAGCATACTCAGTCGCCCGTGATCGGTCAAGCCGAGGCCCAAGCTACCTTCCACCAGATGGTGCA GCACCAGATTCGGCAGGCGATTCGCGCGACCTTCATCGACATTTTGGAAGACGAAGTGGCCGCCTTCATCGGTGCGCAGC CCTACGAGCGTACCGACGAGCGCCGTGATCACCGCGCCGGACATCGCTCGCGCACCCTTGGCACGACCGCTGGGGTGATC GATGATTTGCCCGTCCCACGCACCCGTGGCGGCTTTCGCACCCAGCTGTTTGACCGCTACCAGCGCCGCATGCACGACGT GGATACGCTCATGCAGGATATGTTTGTCGGCGGGGTCAGCCAAACGGCGGTTGGCACGGTGGTTGAGCACTTAACGGGCA ACGCACCCAGTCCCTCAACCGTCTCACGGGTGTTTCATACGCTTGACGACGAGTTTCAGGCCTGGCAGGCTCGCCCGTTG CCCCCACGGTACTGCTATGCCTTCGCCGATGGCACCTATTTCAGCGTTATCTATAACGGGCAAGGCCAGAAAATGCCGAT TTTGGCACTGATTGGCATCACCCCTGATGGCCAGCGCGAAGTGATCGCCTTCACGACGGGCGAGCGTGAAAACCAAGGCG CGTGGGAAAGTCTGCTGGCGGACATCAAGGATCGCGGGGTCGAGACCGTTGATTTGTGGATTACCGATGGGCATCAGGCC ATGCTGAACGCGATTGCGGCGAAGTTTCCTGCATCGCAGCGTCAGCGCTGTGTCGTCCACAAAATGAGCAACATCGAAAG CCACGTTCCCGAAAAATACCGCGATGCACTGCACGCGGAACTGCGGACGATTTTCTATCAGCCCGACCGAGCGCAGGCCG ACCAAGCTGCCGCAGCGTTTATGGCGAAATACGAGCGCCAATACCCGTCGGCGATCCGCTGCATGCAGCGTGACTGGGAA GCCTGCTTGACGTTTTATGCCTATCCTGAGGGGCATTGGGTGAACATTCGCACGTCAAATATCATTGAACGGACATTCGA GGAGGTCAAGAAGCGCAGCAAAAAAATGGCGACGGCGTTTCGGAATGAAGGCAGTTGTTTATTGCTGTTTTATGCCGTTG TTCGAACACTTCAGCTTCGGAAAATTCGCATGCCTGGCTAA
Upstream 100 bases:
>100_bases CAACTGGCGGAAGTTGGTGGTATAACGAGAGTGGTGCAAAATAAAGAGAGCCAGGTGGACTATACTTGGAAATGCAACAG ACCAAGGAAAGGAACCCACC
Downstream 100 bases:
>100_bases TTTGATTTTGCACACTTCTTGACAAACCACCGGAAGTTCTTGGCGTCGCATCACAGCACCGCACTGCGGGCACAGCGGTG CTTCCTGCAGGCAATGAATG
Product: transposase mutator type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MTPINKHTQSPVIGQAEAQATFHQMVQHQIRQAIRATFIDILEDEVAAFIGAQPYERTDERRDHRAGHRSRTLGTTAGVI DDLPVPRTRGGFRTQLFDRYQRRMHDVDTLMQDMFVGGVSQTAVGTVVEHLTGNAPSPSTVSRVFHTLDDEFQAWQARPL PPRYCYAFADGTYFSVIYNGQGQKMPILALIGITPDGQREVIAFTTGERENQGAWESLLADIKDRGVETVDLWITDGHQA MLNAIAAKFPASQRQRCVVHKMSNIESHVPEKYRDALHAELRTIFYQPDRAQADQAAAAFMAKYERQYPSAIRCMQRDWE ACLTFYAYPEGHWVNIRTSNIIERTFEEVKKRSKKMATAFRNEGSCLLLFYAVVRTLQLRKIRMPG
Sequences:
>Translated_386_residues MTPINKHTQSPVIGQAEAQATFHQMVQHQIRQAIRATFIDILEDEVAAFIGAQPYERTDERRDHRAGHRSRTLGTTAGVI DDLPVPRTRGGFRTQLFDRYQRRMHDVDTLMQDMFVGGVSQTAVGTVVEHLTGNAPSPSTVSRVFHTLDDEFQAWQARPL PPRYCYAFADGTYFSVIYNGQGQKMPILALIGITPDGQREVIAFTTGERENQGAWESLLADIKDRGVETVDLWITDGHQA MLNAIAAKFPASQRQRCVVHKMSNIESHVPEKYRDALHAELRTIFYQPDRAQADQAAAAFMAKYERQYPSAIRCMQRDWE ACLTFYAYPEGHWVNIRTSNIIERTFEEVKKRSKKMATAFRNEGSCLLLFYAVVRTLQLRKIRMPG >Mature_385_residues TPINKHTQSPVIGQAEAQATFHQMVQHQIRQAIRATFIDILEDEVAAFIGAQPYERTDERRDHRAGHRSRTLGTTAGVID DLPVPRTRGGFRTQLFDRYQRRMHDVDTLMQDMFVGGVSQTAVGTVVEHLTGNAPSPSTVSRVFHTLDDEFQAWQARPLP PRYCYAFADGTYFSVIYNGQGQKMPILALIGITPDGQREVIAFTTGERENQGAWESLLADIKDRGVETVDLWITDGHQAM LNAIAAKFPASQRQRCVVHKMSNIESHVPEKYRDALHAELRTIFYQPDRAQADQAAAAFMAKYERQYPSAIRCMQRDWEA CLTFYAYPEGHWVNIRTSNIIERTFEEVKKRSKKMATAFRNEGSCLLLFYAVVRTLQLRKIRMPG
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 43968; Mature: 43837
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPINKHTQSPVIGQAEAQATFHQMVQHQIRQAIRATFIDILEDEVAAFIGAQPYERTDE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH RRDHRAGHRSRTLGTTAGVIDDLPVPRTRGGFRTQLFDRYQRRMHDVDTLMQDMFVGGVS HHHHHCCCCCCCCCCHHCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH QTAVGTVVEHLTGNAPSPSTVSRVFHTLDDEFQAWQARPLPPRYCYAFADGTYFSVIYNG HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCEEEEEEECC QGQKMPILALIGITPDGQREVIAFTTGERENQGAWESLLADIKDRGVETVDLWITDGHQA CCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCHHH MLNAIAAKFPASQRQRCVVHKMSNIESHVPEKYRDALHAELRTIFYQPDRAQADQAAAAF HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH MAKYERQYPSAIRCMQRDWEACLTFYAYPEGHWVNIRTSNIIERTFEEVKKRSKKMATAF HHHHHHHCHHHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH RNEGSCLLLFYAVVRTLQLRKIRMPG HCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TPINKHTQSPVIGQAEAQATFHQMVQHQIRQAIRATFIDILEDEVAAFIGAQPYERTDE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH RRDHRAGHRSRTLGTTAGVIDDLPVPRTRGGFRTQLFDRYQRRMHDVDTLMQDMFVGGVS HHHHHCCCCCCCCCCHHCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH QTAVGTVVEHLTGNAPSPSTVSRVFHTLDDEFQAWQARPLPPRYCYAFADGTYFSVIYNG HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCEEEEEEECC QGQKMPILALIGITPDGQREVIAFTTGERENQGAWESLLADIKDRGVETVDLWITDGHQA CCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCHHH MLNAIAAKFPASQRQRCVVHKMSNIESHVPEKYRDALHAELRTIFYQPDRAQADQAAAAF HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH MAKYERQYPSAIRCMQRDWEACLTFYAYPEGHWVNIRTSNIIERTFEEVKKRSKKMATAF HHHHHHHCHHHHHHHHHHHHHHHHHEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH RNEGSCLLLFYAVVRTLQLRKIRMPG HCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7768811; 11481430 [H]