Click here to switch to the map view.

The map label for this gene is 159898456

Identifier: 159898456

GI number: 159898456

Start: 2342052

End: 2342294

Strand: Reverse

Name: 159898456

Synonym: Haur_1932

Alternate gene names: NA

Gene position: 2342294-2342052 (Counterclockwise)

Preceding gene: 159898457

Following gene: 159898453

Centisome position: 36.91

GC content: 51.03

Gene sequence:

>243_bases
ATGATCGAGGGCATCCTATCTAACCGAATCCGTTTGCTACGCTTTATTAATGGCGAAATGACCCAAGCCGATCTCGGCCA
GCGCATCGGGGTTACCCGCCAGACGATTGCGGCAATCGAAGCAGGCAAATACGCGCCGACCTTAGAAGCAGCCTTTCGGA
TTGCTCATGTTTTCCAAGTGCCATTGGATGAAGTGTTTCAATGGATACCACACGATGGCGCAGGGATGAATTATCAGGGA
TGA

Upstream 100 bases:

>100_bases
CCGAACACGGCTGGACAATCGTCAACGCCGCAATCATGATCATGGTTATCTCAGAAGTTGTACAATACAGCGTCACCGTG
ATTAGCTATCGCAGGTACTC

Downstream 100 bases:

>100_bases
GGATTGACGATGGGCGTTTGATCCACGAAGCGCAGGCAGGGGATGTGGCTTGTGGCGATGATGAATCCCCTCACCCCAAC
CCCTCGCCCACTGCGGCGGG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator; Helix-Turn-Helix; Cro/CI Family Transcriptional Regulator; Transciptional Regulator; Transcriptional Regulator Protein-Like Protein

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MIEGILSNRIRLLRFINGEMTQADLGQRIGVTRQTIAAIEAGKYAPTLEAAFRIAHVFQVPLDEVFQWIPHDGAGMNYQG

Sequences:

>Translated_80_residues
MIEGILSNRIRLLRFINGEMTQADLGQRIGVTRQTIAAIEAGKYAPTLEAAFRIAHVFQVPLDEVFQWIPHDGAGMNYQG
>Mature_80_residues
MIEGILSNRIRLLRFINGEMTQADLGQRIGVTRQTIAAIEAGKYAPTLEAAFRIAHVFQVPLDEVFQWIPHDGAGMNYQG

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8927; Mature: 8927

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEGILSNRIRLLRFINGEMTQADLGQRIGVTRQTIAAIEAGKYAPTLEAAFRIAHVFQV
CCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
PLDEVFQWIPHDGAGMNYQG
CHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIEGILSNRIRLLRFINGEMTQADLGQRIGVTRQTIAAIEAGKYAPTLEAAFRIAHVFQV
CCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
PLDEVFQWIPHDGAGMNYQG
CHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA