| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898457
Identifier: 159898457
GI number: 159898457
Start: 2342291
End: 2342710
Strand: Reverse
Name: 159898457
Synonym: Haur_1933
Alternate gene names: NA
Gene position: 2342710-2342291 (Counterclockwise)
Preceding gene: 159898460
Following gene: 159898456
Centisome position: 36.91
GC content: 49.52
Gene sequence:
>420_bases ATGCCGTATCGAGAGAAAACTGCTTGGTTAGCACTGATCGCTATCGCGGTTACCTATGGCCCCTACTTCACCTTATCGGC AATCTTTCAACCAGTTGACGTGCCCAATTTGCCACAGCTTGGCCTATTTGCTGCCACAACCATCAGCCAACTGATCATTT TGGGTGTAGGCCATATCTATTTAGGAATGAAAGCACCGCAAGATCGGCGCATGCCGCCCGACGAGCGCGATCAAGCTATT CAACGTCGCTCATTCCAATCGGCCTATTATGTGCTGATGATGGGAATGATTGTGGTTGGTGGGATCATGCCCTTCACCGA ACACGGCTGGACAATCGTCAACGCCGCAATCATGATCATGGTTATCTCAGAAGTTGTACAATACAGCGTCACCGTGATTA GCTATCGCAGGTACTCATGA
Upstream 100 bases:
>100_bases TATGTTCCATAAAATTACCCTATTGACATGTAAAATCGACATAATGTATAGTATTTCTAACATCAGATTAGGTTTATTTG ACATATCTAAGGAGCATCGT
Downstream 100 bases:
>100_bases TCGAGGGCATCCTATCTAACCGAATCCGTTTGCTACGCTTTATTAATGGCGAAATGACCCAAGCCGATCTCGGCCAGCGC ATCGGGGTTACCCGCCAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MPYREKTAWLALIAIAVTYGPYFTLSAIFQPVDVPNLPQLGLFAATTISQLIILGVGHIYLGMKAPQDRRMPPDERDQAI QRRSFQSAYYVLMMGMIVVGGIMPFTEHGWTIVNAAIMIMVISEVVQYSVTVISYRRYS
Sequences:
>Translated_139_residues MPYREKTAWLALIAIAVTYGPYFTLSAIFQPVDVPNLPQLGLFAATTISQLIILGVGHIYLGMKAPQDRRMPPDERDQAI QRRSFQSAYYVLMMGMIVVGGIMPFTEHGWTIVNAAIMIMVISEVVQYSVTVISYRRYS >Mature_138_residues PYREKTAWLALIAIAVTYGPYFTLSAIFQPVDVPNLPQLGLFAATTISQLIILGVGHIYLGMKAPQDRRMPPDERDQAIQ RRSFQSAYYVLMMGMIVVGGIMPFTEHGWTIVNAAIMIMVISEVVQYSVTVISYRRYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15650; Mature: 15519
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYREKTAWLALIAIAVTYGPYFTLSAIFQPVDVPNLPQLGLFAATTISQLIILGVGHIY CCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHE LGMKAPQDRRMPPDERDQAIQRRSFQSAYYVLMMGMIVVGGIMPFTEHGWTIVNAAIMIM ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH VISEVVQYSVTVISYRRYS HHHHHHHHHHHHHEEECCC >Mature Secondary Structure PYREKTAWLALIAIAVTYGPYFTLSAIFQPVDVPNLPQLGLFAATTISQLIILGVGHIY CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHE LGMKAPQDRRMPPDERDQAIQRRSFQSAYYVLMMGMIVVGGIMPFTEHGWTIVNAAIMIM ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH VISEVVQYSVTVISYRRYS HHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA