Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159898453

Identifier: 159898453

GI number: 159898453

Start: 2335196

End: 2336314

Strand: Reverse

Name: 159898453

Synonym: Haur_1929

Alternate gene names: NA

Gene position: 2336314-2335196 (Counterclockwise)

Preceding gene: 159898456

Following gene: 159898452

Centisome position: 36.81

GC content: 51.83

Gene sequence:

>1119_bases
ATGAGCACACGACCACAAGCCCCGCAACCAACCGCCCATGAACCAACCACGCGCACATTTGGCCACGATTGGCAGACCGA
TTTTAGCCGTCAGTTGGTTGATTATCGCGAGTTCACGCTGGGCAATCCACGGCGTGATGGCATTCCACCGATCAATCAGC
CGCAATTTGAGTCGATTGATCAAGCCAACGATTGGCTCAGCCCTGATGATCCAGTTTTAGTTGTATCCAACCAGCAGCAC
ACCACAATCTATCCGCTGCAAATCTTGATGTGGCATGAAATTGTGAACGATTGGCTTGGCGAGCTGCCAATTGCCGTGAC
TTTTTGCCCATTATGCAATATTGGTGTTGTGTTCGAGCGCCAAGTCGCCAACCAACGATTAACCTTTGGCGTTTCAGGTT
TGCTGCGCAAAAGTGATTTAGTAATGTGGGATCGTCAAACCGAATCGTTGTGGCAACAAGCAACGGGGTTGGGTCTGGTT
GGACATTTTGCCGGAAGCCAACTCCAAATGCTGCCAAGCCTCTTGGTTGCGTGGCAGATTGCCTGCGAGCAAGCCCCGAC
GAGCCGTGTACTATCGCGCCAAACTGGCTTTCGGCGCAGTTATGGCCAAAATCCCTACATTGCCTACGATCAACAAACCA
CTCCATGGCTATTGCAACAACGCCCCAATCCTCAACTACCAGCGCTGGAACGGGTGGTTGGTTTGGTGATTGGTAACGCC
GCGCTCGCCTATCCCTTCAGTATTTTAGCACGTCGGCTGGTAATAAACGATCACTATCTGGATACTTCGATCGCAATTTT
CTATCAAGCAGGCATGGCTTCAGCGGTTGATGCCGCCACCATCGCCCAATCGCATGCAACTGGCATGGGCACAGCTTGGC
AACGCCAATTGGATGGCATGCTGCTGAGCTTTGAATCGCGTGATCACGCGATTTATGACCACCAAACCAACAGTCGTTGG
GATATTAGCGGACGAGCGCTAGCAGGCCCACTACAAGGGCGACAACTTACCCCAATTATTCATGGCAATCATTTTTGGTT
TGCCTTCGCGGCGTTGATTGGTGAGCGAACCCAAACCCTGCGGCTCTACTCCGATGTTGATGCGATGGATACGGTTTGA

Upstream 100 bases:

>100_bases
TCCATCCAAATTGACTGGCGTGCCAATATCACTCTGGTCAGGGGTCGGGGCTTACCCAAATTTGTTCAAAACCGCTTCTT
GAAACTGGAGGATACCCCTA

Downstream 100 bases:

>100_bases
TTACGCTCAAGCCCTATGCTTGCCGCAGTGCAACCTTTGGAGGAAAATCAATGCCTATTTCGCTCAAAATACTTAGCAGC
TTGCTCATGGCAGCGCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MSTRPQAPQPTAHEPTTRTFGHDWQTDFSRQLVDYREFTLGNPRRDGIPPINQPQFESIDQANDWLSPDDPVLVVSNQQH
TTIYPLQILMWHEIVNDWLGELPIAVTFCPLCNIGVVFERQVANQRLTFGVSGLLRKSDLVMWDRQTESLWQQATGLGLV
GHFAGSQLQMLPSLLVAWQIACEQAPTSRVLSRQTGFRRSYGQNPYIAYDQQTTPWLLQQRPNPQLPALERVVGLVIGNA
ALAYPFSILARRLVINDHYLDTSIAIFYQAGMASAVDAATIAQSHATGMGTAWQRQLDGMLLSFESRDHAIYDHQTNSRW
DISGRALAGPLQGRQLTPIIHGNHFWFAFAALIGERTQTLRLYSDVDAMDTV

Sequences:

>Translated_372_residues
MSTRPQAPQPTAHEPTTRTFGHDWQTDFSRQLVDYREFTLGNPRRDGIPPINQPQFESIDQANDWLSPDDPVLVVSNQQH
TTIYPLQILMWHEIVNDWLGELPIAVTFCPLCNIGVVFERQVANQRLTFGVSGLLRKSDLVMWDRQTESLWQQATGLGLV
GHFAGSQLQMLPSLLVAWQIACEQAPTSRVLSRQTGFRRSYGQNPYIAYDQQTTPWLLQQRPNPQLPALERVVGLVIGNA
ALAYPFSILARRLVINDHYLDTSIAIFYQAGMASAVDAATIAQSHATGMGTAWQRQLDGMLLSFESRDHAIYDHQTNSRW
DISGRALAGPLQGRQLTPIIHGNHFWFAFAALIGERTQTLRLYSDVDAMDTV
>Mature_371_residues
STRPQAPQPTAHEPTTRTFGHDWQTDFSRQLVDYREFTLGNPRRDGIPPINQPQFESIDQANDWLSPDDPVLVVSNQQHT
TIYPLQILMWHEIVNDWLGELPIAVTFCPLCNIGVVFERQVANQRLTFGVSGLLRKSDLVMWDRQTESLWQQATGLGLVG
HFAGSQLQMLPSLLVAWQIACEQAPTSRVLSRQTGFRRSYGQNPYIAYDQQTTPWLLQQRPNPQLPALERVVGLVIGNAA
LAYPFSILARRLVINDHYLDTSIAIFYQAGMASAVDAATIAQSHATGMGTAWQRQLDGMLLSFESRDHAIYDHQTNSRWD
ISGRALAGPLQGRQLTPIIHGNHFWFAFAALIGERTQTLRLYSDVDAMDTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41892; Mature: 41761

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRPQAPQPTAHEPTTRTFGHDWQTDFSRQLVDYREFTLGNPRRDGIPPINQPQFESID
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
QANDWLSPDDPVLVVSNQQHTTIYPLQILMWHEIVNDWLGELPIAVTFCPLCNIGVVFER
HHCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEHH
QVANQRLTFGVSGLLRKSDLVMWDRQTESLWQQATGLGLVGHFAGSQLQMLPSLLVAWQI
HHHCCHHHCCHHHHHHHCCEEEECCHHHHHHHHHCCCCEEEHHCCCHHHHHHHHHHHHHH
ACEQAPTSRVLSRQTGFRRSYGQNPYIAYDQQTTPWLLQQRPNPQLPALERVVGLVIGNA
HHHCCCHHHHHHHHHCHHHHCCCCCEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHCCH
ALAYPFSILARRLVINDHYLDTSIAIFYQAGMASAVDAATIAQSHATGMGTAWQRQLDGM
HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCE
LLSFESRDHAIYDHQTNSRWDISGRALAGPLQGRQLTPIIHGNHFWFAFAALIGERTQTL
EEEECCCCCEEEECCCCCEEECCCCEEECCCCCCEECEEEECCHHHHHHHHHHCCCHHEE
RLYSDVDAMDTV
EEECCCHHHCCC
>Mature Secondary Structure 
STRPQAPQPTAHEPTTRTFGHDWQTDFSRQLVDYREFTLGNPRRDGIPPINQPQFESID
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
QANDWLSPDDPVLVVSNQQHTTIYPLQILMWHEIVNDWLGELPIAVTFCPLCNIGVVFER
HHCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEHH
QVANQRLTFGVSGLLRKSDLVMWDRQTESLWQQATGLGLVGHFAGSQLQMLPSLLVAWQI
HHHCCHHHCCHHHHHHHCCEEEECCHHHHHHHHHCCCCEEEHHCCCHHHHHHHHHHHHHH
ACEQAPTSRVLSRQTGFRRSYGQNPYIAYDQQTTPWLLQQRPNPQLPALERVVGLVIGNA
HHHCCCHHHHHHHHHCHHHHCCCCCEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHCCH
ALAYPFSILARRLVINDHYLDTSIAIFYQAGMASAVDAATIAQSHATGMGTAWQRQLDGM
HHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCE
LLSFESRDHAIYDHQTNSRWDISGRALAGPLQGRQLTPIIHGNHFWFAFAALIGERTQTL
EEEECCCCCEEEECCCCCEEECCCCEEECCCCCCEECEEEECCHHHHHHHHHHCCCHHEE
RLYSDVDAMDTV
EEECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA