| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159898122
Identifier: 159898122
GI number: 159898122
Start: 1853285
End: 1855312
Strand: Direct
Name: 159898122
Synonym: Haur_1598
Alternate gene names: NA
Gene position: 1853285-1855312 (Clockwise)
Preceding gene: 159898121
Following gene: 159898126
Centisome position: 29.2
GC content: 50.69
Gene sequence:
>2028_bases ATGAAGCAACGTGTTGTTTGGTTCGCTGTGTTGCTGGTGGCCGTGCTTGGCGTGCCTTTTAGCGTTTGGGCTGCAACCCC GCGTCAAACTCCGACCAAAGCACCGCTGGCCGTTCAAGCTACTGTGCGAGTTGTGGAATCGGTTCCCGTGGTGGCTCCGG CGGTGGCAGTAACGGCAACTGCGGTTACCTGCGATCCGCTGACCACCCGCTCGTTATATGGCTGGTTCACCTCGAACACG ACTGGCTCGGTTTACAATAGCTCATACACATGTGCATTTGAGGTAGGGATTGCCGCATACAGCATGTTTGATGATCGAAT TGGCAACCAACAATTGTTTGACTACACCATGTATACCGTGGCTCCCCGTCAAACCATTAACTTGAATGTAAAAATTCCTG ATTGCAAAGCCCAACTGGATATCTTCCGTGGGCCAGTCTTGCACTCGTTGGTTGGTCAGCGCTATGGCGAACGCTTGCTT TCAACGCGCTTCCCCAACACAACCCTTTGTGCTCCACCAGTTGAAGAAGTGTGTAGCCAAGGCCAAATCAGCCGCTTGAG TGGCGTGAGCAACAATCAATTGGTAACTGGAGTTTTGAATATTCAAGCTGAAGTTACTGGCGCTTTGCCCCAAAAAGTTG AATTTGCTTTGACTGGTGCCCAAACCACCAACTATACCGATGTCAACTCGCCCTACTATTTCATGGGCAACAATGGTAGT CAGCCCAATGGTTGGGATTCAAGCACCAAGCCCGAAGGCGATTATCGCTTGAGCGCAACCTATGTTGGTTTGTTTGGTGA ATCATTAGCGATTCGCTGTGAGCCTGTGGCAGTCAATTTCAGCATTCGCCGCAGCACGCCAACCACCGAGCCAACCGCAA CCAGCACACCGTTGCCAACGGCAACCAACACTCCAGTGCCAACCGCGACGAGTACGCCAACGGCCACTGCAACCAACACG CCAGTGCCAACGGCAACCAACACTCCAGTGCCAACCGCGACGAGTACGCCAACGGCCACTGCAACCAACACGCCAGTGCC AACGGCAACCAACACTCCAGTGCCAACCGCGACGAGTACGCCAACGGCTACTGCAACTAGCACACCGTTGCCAACGGCAA CCAGCACACCGTTGCCAACGGCAACCAGCACACCGTTGCCAACCGCGACTAACACGCCAGTGCCAACAGCAACTAGTACT CCAGTACCAACCAGTACTCCTGTGCCTGGTAACCAATGTGTACCACAAGGGTTAGGCACTGCTGGCGATTTCAATGTCTT TACCTTTGGCAACATCACCCAAAGCAACACCGATATTGAAGGTCGGGTCGCTGCTGGTGGCAATATCAACTTCCAAAACT TTGGGGTTGGCGTGCGCTTGACCAATTCAAATGGTACGCGCGACGACTTAGTTGCCGGCGGTTCGTTGACCTACACCAAC GGTTCGGTTTACAACGGCAATGTGGTTTATGGCACGACTAAATCATTGAATGGCGTTAGCGTCTTGAATGGTACCGTTCG CCAAGGCCAACCAATCAACTTTGCCAACGAGCAAACTTCATTGCGCAACCGTTCGCAAGCTTGGGGTGGCTTGAGTGCTA ATGGCACGACGGTCTATGAATATGGTGCAGTCAAGTTGAGCGGAACCAATACAACCCTGAATATCTTCACGGTTGATGGT GCTCAATTGAATAATGCTAATGGCTTGAACATCAACGTTCCAGCAAGTTCATCAGTCTTGATTAATATCACTGGCACGAA CAATCGAATGCAAAATTTCGAAACCTTCTTGACAAATGTTGATCAAACCAAGATTGTCTACAACTTCTACCAAGCCACTA GCTTTAGCCTCTCAGGGATTGGCATCAAAGGTACAATCTTGGCTCCATTTGCTGATGTAAGCTTTAGCAATGGCCAAATC AACGGGACATTGATTGGTAACTCATTGATTGGTGGTGGCGAATCACACCATTATCCATTCAATGGTTGTTTGCCAGCAAT TCCAGCTAACAAGTCAGTTGAACGCTAA
Upstream 100 bases:
>100_bases TAATAAAAACAAATCTCCACCTTGATTAACGATACGGCTATATTATGATACATAGGTCATTGTTTTTGTAGTACTTGTAT CTATTATTGAGGATGCTTTT
Downstream 100 bases:
>100_bases TTTCTAAAACCAAAAGCAAAGGCCTTGGGAATTTCCCAAGGCCTTTTGTTCTTTAATCGTTCACATCACTGGCAATCGAG CGCATCAGCCGCCAATATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 675; Mature: 675
Protein sequence:
>675_residues MKQRVVWFAVLLVAVLGVPFSVWAATPRQTPTKAPLAVQATVRVVESVPVVAPAVAVTATAVTCDPLTTRSLYGWFTSNT TGSVYNSSYTCAFEVGIAAYSMFDDRIGNQQLFDYTMYTVAPRQTINLNVKIPDCKAQLDIFRGPVLHSLVGQRYGERLL STRFPNTTLCAPPVEEVCSQGQISRLSGVSNNQLVTGVLNIQAEVTGALPQKVEFALTGAQTTNYTDVNSPYYFMGNNGS QPNGWDSSTKPEGDYRLSATYVGLFGESLAIRCEPVAVNFSIRRSTPTTEPTATSTPLPTATNTPVPTATSTPTATATNT PVPTATNTPVPTATSTPTATATNTPVPTATNTPVPTATSTPTATATSTPLPTATSTPLPTATSTPLPTATNTPVPTATST PVPTSTPVPGNQCVPQGLGTAGDFNVFTFGNITQSNTDIEGRVAAGGNINFQNFGVGVRLTNSNGTRDDLVAGGSLTYTN GSVYNGNVVYGTTKSLNGVSVLNGTVRQGQPINFANEQTSLRNRSQAWGGLSANGTTVYEYGAVKLSGTNTTLNIFTVDG AQLNNANGLNINVPASSSVLINITGTNNRMQNFETFLTNVDQTKIVYNFYQATSFSLSGIGIKGTILAPFADVSFSNGQI NGTLIGNSLIGGGESHHYPFNGCLPAIPANKSVER
Sequences:
>Translated_675_residues MKQRVVWFAVLLVAVLGVPFSVWAATPRQTPTKAPLAVQATVRVVESVPVVAPAVAVTATAVTCDPLTTRSLYGWFTSNT TGSVYNSSYTCAFEVGIAAYSMFDDRIGNQQLFDYTMYTVAPRQTINLNVKIPDCKAQLDIFRGPVLHSLVGQRYGERLL STRFPNTTLCAPPVEEVCSQGQISRLSGVSNNQLVTGVLNIQAEVTGALPQKVEFALTGAQTTNYTDVNSPYYFMGNNGS QPNGWDSSTKPEGDYRLSATYVGLFGESLAIRCEPVAVNFSIRRSTPTTEPTATSTPLPTATNTPVPTATSTPTATATNT PVPTATNTPVPTATSTPTATATNTPVPTATNTPVPTATSTPTATATSTPLPTATSTPLPTATSTPLPTATNTPVPTATST PVPTSTPVPGNQCVPQGLGTAGDFNVFTFGNITQSNTDIEGRVAAGGNINFQNFGVGVRLTNSNGTRDDLVAGGSLTYTN GSVYNGNVVYGTTKSLNGVSVLNGTVRQGQPINFANEQTSLRNRSQAWGGLSANGTTVYEYGAVKLSGTNTTLNIFTVDG AQLNNANGLNINVPASSSVLINITGTNNRMQNFETFLTNVDQTKIVYNFYQATSFSLSGIGIKGTILAPFADVSFSNGQI NGTLIGNSLIGGGESHHYPFNGCLPAIPANKSVER >Mature_675_residues MKQRVVWFAVLLVAVLGVPFSVWAATPRQTPTKAPLAVQATVRVVESVPVVAPAVAVTATAVTCDPLTTRSLYGWFTSNT TGSVYNSSYTCAFEVGIAAYSMFDDRIGNQQLFDYTMYTVAPRQTINLNVKIPDCKAQLDIFRGPVLHSLVGQRYGERLL STRFPNTTLCAPPVEEVCSQGQISRLSGVSNNQLVTGVLNIQAEVTGALPQKVEFALTGAQTTNYTDVNSPYYFMGNNGS QPNGWDSSTKPEGDYRLSATYVGLFGESLAIRCEPVAVNFSIRRSTPTTEPTATSTPLPTATNTPVPTATSTPTATATNT PVPTATNTPVPTATSTPTATATNTPVPTATNTPVPTATSTPTATATSTPLPTATSTPLPTATSTPLPTATNTPVPTATST PVPTSTPVPGNQCVPQGLGTAGDFNVFTFGNITQSNTDIEGRVAAGGNINFQNFGVGVRLTNSNGTRDDLVAGGSLTYTN GSVYNGNVVYGTTKSLNGVSVLNGTVRQGQPINFANEQTSLRNRSQAWGGLSANGTTVYEYGAVKLSGTNTTLNIFTVDG AQLNNANGLNINVPASSSVLINITGTNNRMQNFETFLTNVDQTKIVYNFYQATSFSLSGIGIKGTILAPFADVSFSNGQI NGTLIGNSLIGGGESHHYPFNGCLPAIPANKSVER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70733; Mature: 70733
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRVVWFAVLLVAVLGVPFSVWAATPRQTPTKAPLAVQATVRVVESVPVVAPAVAVTAT CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEE AVTCDPLTTRSLYGWFTSNTTGSVYNSSYTCAFEVGIAAYSMFDDRIGNQQLFDYTMYTV EEEECCCCCCEEEEEEECCCCCCEECCCEEEEEEECHHHHHHHHHHCCCCEEEEEEEEEE APRQTINLNVKIPDCKAQLDIFRGPVLHSLVGQRYGERLLSTRFPNTTLCAPPVEEVCSQ CCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHCC GQISRLSGVSNNQLVTGVLNIQAEVTGALPQKVEFALTGAQTTNYTDVNSPYYFMGNNGS CCCHHHCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCEECCCCEEEECCCCC QPNGWDSSTKPEGDYRLSATYVGLFGESLAIRCEPVAVNFSIRRSTPTTEPTATSTPLPT CCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCC ATNTPVPTATSTPTATATNTPVPTATNTPVPTATSTPTATATNTPVPTATNTPVPTATST CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTATATSTPLPTATSTPLPTATSTPLPTATNTPVPTATSTPVPTSTPVPGNQCVPQGLGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGDFNVFTFGNITQSNTDIEGRVAAGGNINFQNFGVGVRLTNSNGTRDDLVAGGSLTYTN CCCEEEEEECCEECCCCCCCEEEECCCCCCEEEECEEEEEECCCCCHHHEEECCEEEECC GSVYNGNVVYGTTKSLNGVSVLNGTVRQGQPINFANEQTSLRNRSQAWGGLSANGTTVYE CCEEECCEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEE YGAVKLSGTNTTLNIFTVDGAQLNNANGLNINVPASSSVLINITGTNNRMQNFETFLTNV ECEEEEECCCEEEEEEEECCCEECCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHCCC DQTKIVYNFYQATSFSLSGIGIKGTILAPFADVSFSNGQINGTLIGNSLIGGGESHHYPF CCCEEEEEEEECCEEEEECCCEEEEEEECEECCCCCCCEEEEEEEECCEECCCCCCCCCC NGCLPAIPANKSVER CCCCCCCCCCCCCCC >Mature Secondary Structure MKQRVVWFAVLLVAVLGVPFSVWAATPRQTPTKAPLAVQATVRVVESVPVVAPAVAVTAT CCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCEEEEE AVTCDPLTTRSLYGWFTSNTTGSVYNSSYTCAFEVGIAAYSMFDDRIGNQQLFDYTMYTV EEEECCCCCCEEEEEEECCCCCCEECCCEEEEEEECHHHHHHHHHHCCCCEEEEEEEEEE APRQTINLNVKIPDCKAQLDIFRGPVLHSLVGQRYGERLLSTRFPNTTLCAPPVEEVCSQ CCCEEEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHCC GQISRLSGVSNNQLVTGVLNIQAEVTGALPQKVEFALTGAQTTNYTDVNSPYYFMGNNGS CCCHHHCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEECCCCCCCEECCCCEEEECCCCC QPNGWDSSTKPEGDYRLSATYVGLFGESLAIRCEPVAVNFSIRRSTPTTEPTATSTPLPT CCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCC ATNTPVPTATSTPTATATNTPVPTATNTPVPTATSTPTATATNTPVPTATNTPVPTATST CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTATATSTPLPTATSTPLPTATSTPLPTATNTPVPTATSTPVPTSTPVPGNQCVPQGLGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGDFNVFTFGNITQSNTDIEGRVAAGGNINFQNFGVGVRLTNSNGTRDDLVAGGSLTYTN CCCEEEEEECCEECCCCCCCEEEECCCCCCEEEECEEEEEECCCCCHHHEEECCEEEECC GSVYNGNVVYGTTKSLNGVSVLNGTVRQGQPINFANEQTSLRNRSQAWGGLSANGTTVYE CCEEECCEEEECCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEE YGAVKLSGTNTTLNIFTVDGAQLNNANGLNINVPASSSVLINITGTNNRMQNFETFLTNV ECEEEEECCCEEEEEEEECCCEECCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHCCC DQTKIVYNFYQATSFSLSGIGIKGTILAPFADVSFSNGQINGTLIGNSLIGGGESHHYPF CCCEEEEEEEECCEEEEECCCEEEEEEECEECCCCCCCEEEEEEEECCEECCCCCCCCCC NGCLPAIPANKSVER CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA