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The map label for this gene is yoqW [H]

Identifier: 159897982

GI number: 159897982

Start: 1696447

End: 1697106

Strand: Direct

Name: yoqW [H]

Synonym: Haur_1457

Alternate gene names: 159897982

Gene position: 1696447-1697106 (Clockwise)

Preceding gene: 159897980

Following gene: 159897983

Centisome position: 26.73

GC content: 50.15

Gene sequence:

>660_bases
ATGTGTGGACGCTATTCGATCACTGCGAATGGGCAGCAAATTGCCTTACGTTTTGGGGTGCAAGTGGCGGGCGATTGGCA
AGCTCACTATAATGCAGCGCCAAGCCAGAATTTACCAGTTATTCTCAATCGTGATCCGCAAAGTGTGCAATGGTTACGTT
GGGGTTTAGTGCCACATTGGGCCAAAGATCCCAGCATTGGGCATAAAATGATTAATGCTCGCGCCGAAACACTCCTAGAA
AAACCTAGTTTTCGCGAGCCATTGCGCAAACGTCGCTGTTTGGTGCTAGCCGATGGCTATTATGAATGGCAGGCAACTTC
CAATGGCAAGCAACCCATGCGCTTTGTGCTCGAAGATGCTCAACCATTTGCCATGGCAGGTCTGTGGGAAGAATGGAACG
CTGGCACTACTCCCCTAGCCACGTTTACCGTGATTACAACCTCGGCTAATTCGATGGCGGCAGCGGTGCATAACCGCATG
CCGGTGATTCTTGAGCCAGAAACCGAGCGTGATTGGCTCAATCCTAATGCTGATGTGGCTGATCTGCTGCCGTTACTAAC
GCCGTTTGCTGGTGAAAAAATGCAGGTTTACCCAGTTTCAACCCGCCTGAACTCGCCAAGTAACGATGACTCAAGCTTAA
TTGCGAGAGCTGCAATTTAA

Upstream 100 bases:

>100_bases
AAAAACGAACATATGTGTTTGCTTTTAAGGTTTTTAAAGGTATACTTAAGTTTAGGGTAACTGATAGTAGCTTTTGGGCG
ATTACAAAGGAGTTAAAGCG

Downstream 100 bases:

>100_bases
GTGGATTGAAGGCTGATTGGCGCTAAAATACTGGCCTCAGCATTTGCGTAGGACTATGGTACGGGCTATACTAGGAGCAA
GCGTAATTCGCGCGATGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MCGRYSITANGQQIALRFGVQVAGDWQAHYNAAPSQNLPVILNRDPQSVQWLRWGLVPHWAKDPSIGHKMINARAETLLE
KPSFREPLRKRRCLVLADGYYEWQATSNGKQPMRFVLEDAQPFAMAGLWEEWNAGTTPLATFTVITTSANSMAAAVHNRM
PVILEPETERDWLNPNADVADLLPLLTPFAGEKMQVYPVSTRLNSPSNDDSSLIARAAI

Sequences:

>Translated_219_residues
MCGRYSITANGQQIALRFGVQVAGDWQAHYNAAPSQNLPVILNRDPQSVQWLRWGLVPHWAKDPSIGHKMINARAETLLE
KPSFREPLRKRRCLVLADGYYEWQATSNGKQPMRFVLEDAQPFAMAGLWEEWNAGTTPLATFTVITTSANSMAAAVHNRM
PVILEPETERDWLNPNADVADLLPLLTPFAGEKMQVYPVSTRLNSPSNDDSSLIARAAI
>Mature_219_residues
MCGRYSITANGQQIALRFGVQVAGDWQAHYNAAPSQNLPVILNRDPQSVQWLRWGLVPHWAKDPSIGHKMINARAETLLE
KPSFREPLRKRRCLVLADGYYEWQATSNGKQPMRFVLEDAQPFAMAGLWEEWNAGTTPLATFTVITTSANSMAAAVHNRM
PVILEPETERDWLNPNADVADLLPLLTPFAGEKMQVYPVSTRLNSPSNDDSSLIARAAI

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=270, Percent_Identity=30.7407407407407, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI54607104, Length=270, Percent_Identity=30.7407407407407, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI48994894, Length=229, Percent_Identity=25.3275109170306, Blast_Score=83, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6323761, Length=198, Percent_Identity=32.8282828282828, Blast_Score=108, Evalue=7e-25,
Organism=Drosophila melanogaster, GI21355761, Length=219, Percent_Identity=28.310502283105, Blast_Score=83, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 24455; Mature: 24455

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRYSITANGQQIALRFGVQVAGDWQAHYNAAPSQNLPVILNRDPQSVQWLRWGLVPHW
CCCCEEEECCCCEEEEEECEEEECCCHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCCC
AKDPSIGHKMINARAETLLEKPSFREPLRKRRCLVLADGYYEWQATSNGKQPMRFVLEDA
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCEEEEEECCCCCCCHHHHHCCC
QPFAMAGLWEEWNAGTTPLATFTVITTSANSMAAAVHNRMPVILEPETERDWLNPNADVA
CCHHHHCCHHHCCCCCCCEEEEEEEEECCCHHHHHHHCCCCEEECCCCCCCCCCCCCCHH
DLLPLLTPFAGEKMQVYPVSTRLNSPSNDDSSLIARAAI
HHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHEEEECC
>Mature Secondary Structure
MCGRYSITANGQQIALRFGVQVAGDWQAHYNAAPSQNLPVILNRDPQSVQWLRWGLVPHW
CCCCEEEECCCCEEEEEECEEEECCCHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCCC
AKDPSIGHKMINARAETLLEKPSFREPLRKRRCLVLADGYYEWQATSNGKQPMRFVLEDA
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCEEEEECCEEEEEECCCCCCCHHHHHCCC
QPFAMAGLWEEWNAGTTPLATFTVITTSANSMAAAVHNRMPVILEPETERDWLNPNADVA
CCHHHHCCHHHCCCCCCCEEEEEEEEECCCHHHHHHHCCCCEEECCCCCCCCCCCCCCHH
DLLPLLTPFAGEKMQVYPVSTRLNSPSNDDSSLIARAAI
HHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]