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The map label for this gene is sufS [C]

Identifier: 159897980

GI number: 159897980

Start: 1694190

End: 1695449

Strand: Direct

Name: sufS [C]

Synonym: Haur_1455

Alternate gene names: 159897980

Gene position: 1694190-1695449 (Clockwise)

Preceding gene: 159897967

Following gene: 159897982

Centisome position: 26.69

GC content: 50.95

Gene sequence:

>1260_bases
ATGACGGTCGATTTAGCGCCATTTCGTAGTCACTTTCCAGCGTTAACCCAGACTCACGCGGGGAAACCCTTAGTTTTTTT
TGATAATCCTGGTGGAACCCAAGTGCCCCAACAAGTGATTGGCCAGATGACCGATTATTTGCGGCGTTCGGTTGCCAATA
CCCATGGTGCTTTTATCACCAGCCAGCGCACCGATGCCGTCATTGACGAATGTCATGCAGGGTTGGCGGCCTTGCTTGGC
GGTGAGCCAGATGAAATTGTGCTGGGAGCCAACATGACTTCGCTCACATTTGCACTCAGTCGTTCACTAGCTCGCGAATG
GCAAGCTGGCGATGAGATTATTCTGACCACGCTTGACCACGATGCCAACGTTACGCCATGGCTGCTGGCTGCTGAAGAAC
GTGGGGTTATCGTACACTTTGTGGATATTAATCCTGTTGATTGCACCCTGGTGATGAGTGACTTTGAGCGCTATCTTTCG
CCGCGCACTAAATTGGTGGCCGTTGGTTGGGCCTCAAATGCCTTTGGCACAATTAATGATGTTCAAACGATTGTCAAACA
AGCCCATGCTGTTGGTGCTTTGTGTTTTGTTGATGCGGTTCAGAGCGTGCCCCACATTCCATGCGATGTCAAAGCGCTTG
ATGCCGATTTTGTGGCATGTTCGGCCTATAAATTTTTTGGGCCGCATGTTGGGGTGCTCTGGGCCAAACGCGAACATCTA
GAGCGCCTGTTTGCTTATAAAGTGCGACCTGCCCCCGAAACTTTGCCTAGTCGCTGGGAAACTGGCACGCAAAATTTTGA
AGGCCAAGCGGGCATCAACGGAGCCTTGGAATATCTCGGTGGCTTAGGTGTGGGTTATATGGAGCGCTACGATCAGCTGC
TTGGCGAAACGGTTGGTCAACGGGCCGTCTTGTTGTCCGCAATGCATGCGATTGCTGAAGCCGAGCAGAGCCTTGGCCAA
TATTTGATTCAAGCGTTGCAAACGCTTAAAGGTGTGCAATTGTATGGCATTTTGGAGCCTGAACGTGGCCATTTGCGCGT
ACCCACCGTGGCATTTCGCAAGGCTGGAGTTACGCCCCAAGCAATTGCCAAAACCTTTGGTAATGAGGGAATTTGTGTTT
GGGATGGCCATTATTATGCCTTGCGAGCCGTCGAACGCTTAGGCTTGCTTGATCAAGGGGGGATGGTGCGGGTTGGTTTA
GCCCATTACAACACGCGCACTGAGATTGATCGTATGCTGAATGTGCTTGAATCAATTTAG

Upstream 100 bases:

>100_bases
ATTGCTGCAAAATCGGGCTTAGCCAGATCTTGTATGATAAAGCTTGTTTTGCTGGCTAGCCTGCTTGTATGCGACCTAGC
ATAGTTGCCAAGGAGTTACC

Downstream 100 bases:

>100_bases
TGGTGAATGGGCCGCTCGCTAAAATCGCAGTCCCACACTTAATCAATGGAGTGTGGGACTGTTGCAGATCGAAAGTTAAA
TATGTTTGGCTTTGGTTTGT

Product: cysteine desulfurase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MTVDLAPFRSHFPALTQTHAGKPLVFFDNPGGTQVPQQVIGQMTDYLRRSVANTHGAFITSQRTDAVIDECHAGLAALLG
GEPDEIVLGANMTSLTFALSRSLAREWQAGDEIILTTLDHDANVTPWLLAAEERGVIVHFVDINPVDCTLVMSDFERYLS
PRTKLVAVGWASNAFGTINDVQTIVKQAHAVGALCFVDAVQSVPHIPCDVKALDADFVACSAYKFFGPHVGVLWAKREHL
ERLFAYKVRPAPETLPSRWETGTQNFEGQAGINGALEYLGGLGVGYMERYDQLLGETVGQRAVLLSAMHAIAEAEQSLGQ
YLIQALQTLKGVQLYGILEPERGHLRVPTVAFRKAGVTPQAIAKTFGNEGICVWDGHYYALRAVERLGLLDQGGMVRVGL
AHYNTRTEIDRMLNVLESI

Sequences:

>Translated_419_residues
MTVDLAPFRSHFPALTQTHAGKPLVFFDNPGGTQVPQQVIGQMTDYLRRSVANTHGAFITSQRTDAVIDECHAGLAALLG
GEPDEIVLGANMTSLTFALSRSLAREWQAGDEIILTTLDHDANVTPWLLAAEERGVIVHFVDINPVDCTLVMSDFERYLS
PRTKLVAVGWASNAFGTINDVQTIVKQAHAVGALCFVDAVQSVPHIPCDVKALDADFVACSAYKFFGPHVGVLWAKREHL
ERLFAYKVRPAPETLPSRWETGTQNFEGQAGINGALEYLGGLGVGYMERYDQLLGETVGQRAVLLSAMHAIAEAEQSLGQ
YLIQALQTLKGVQLYGILEPERGHLRVPTVAFRKAGVTPQAIAKTFGNEGICVWDGHYYALRAVERLGLLDQGGMVRVGL
AHYNTRTEIDRMLNVLESI
>Mature_418_residues
TVDLAPFRSHFPALTQTHAGKPLVFFDNPGGTQVPQQVIGQMTDYLRRSVANTHGAFITSQRTDAVIDECHAGLAALLGG
EPDEIVLGANMTSLTFALSRSLAREWQAGDEIILTTLDHDANVTPWLLAAEERGVIVHFVDINPVDCTLVMSDFERYLSP
RTKLVAVGWASNAFGTINDVQTIVKQAHAVGALCFVDAVQSVPHIPCDVKALDADFVACSAYKFFGPHVGVLWAKREHLE
RLFAYKVRPAPETLPSRWETGTQNFEGQAGINGALEYLGGLGVGYMERYDQLLGETVGQRAVLLSAMHAIAEAEQSLGQY
LIQALQTLKGVQLYGILEPERGHLRVPTVAFRKAGVTPQAIAKTFGNEGICVWDGHYYALRAVERLGLLDQGGMVRVGLA
HYNTRTEIDRMLNVLESI

Specific function: Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine [H]

COG id: COG0520

COG function: function code E; Selenocysteine lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily [H]

Homologues:

Organism=Homo sapiens, GI156713448, Length=240, Percent_Identity=22.5, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI32307132, Length=228, Percent_Identity=23.2456140350877, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI1787970, Length=438, Percent_Identity=28.0821917808219, Blast_Score=161, Evalue=8e-41,
Organism=Escherichia coli, GI1789175, Length=427, Percent_Identity=26.9320843091335, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI48994898, Length=229, Percent_Identity=24.8908296943231, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI20129463, Length=235, Percent_Identity=24.2553191489362, Blast_Score=76, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR010970
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: =2.8.1.7 [H]

Molecular weight: Translated: 45794; Mature: 45663

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVDLAPFRSHFPALTQTHAGKPLVFFDNPGGTQVPQQVIGQMTDYLRRSVANTHGAFIT
CCCCCCHHHHHCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
SQRTDAVIDECHAGLAALLGGEPDEIVLGANMTSLTFALSRSLAREWQAGDEIILTTLDH
CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECC
DANVTPWLLAAEERGVIVHFVDINPVDCTLVMSDFERYLSPRTKLVAVGWASNAFGTIND
CCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHH
VQTIVKQAHAVGALCFVDAVQSVPHIPCDVKALDADFVACSAYKFFGPHVGVLWAKREHL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCCEEEHHHHHHH
ERLFAYKVRPAPETLPSRWETGTQNFEGQAGINGALEYLGGLGVGYMERYDQLLGETVGQ
HHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RAVLLSAMHAIAEAEQSLGQYLIQALQTLKGVQLYGILEPERGHLRVPTVAFRKAGVTPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCHHHHHHCCCCHH
AIAKTFGNEGICVWDGHYYALRAVERLGLLDQGGMVRVGLAHYNTRTEIDRMLNVLESI
HHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVDLAPFRSHFPALTQTHAGKPLVFFDNPGGTQVPQQVIGQMTDYLRRSVANTHGAFIT
CCCCCHHHHHCCHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
SQRTDAVIDECHAGLAALLGGEPDEIVLGANMTSLTFALSRSLAREWQAGDEIILTTLDH
CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECC
DANVTPWLLAAEERGVIVHFVDINPVDCTLVMSDFERYLSPRTKLVAVGWASNAFGTIND
CCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHH
VQTIVKQAHAVGALCFVDAVQSVPHIPCDVKALDADFVACSAYKFFGPHVGVLWAKREHL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCCEEEHHHHHHH
ERLFAYKVRPAPETLPSRWETGTQNFEGQAGINGALEYLGGLGVGYMERYDQLLGETVGQ
HHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RAVLLSAMHAIAEAEQSLGQYLIQALQTLKGVQLYGILEPERGHLRVPTVAFRKAGVTPQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEECCHHHHHHCCCCHH
AIAKTFGNEGICVWDGHYYALRAVERLGLLDQGGMVRVGLAHYNTRTEIDRMLNVLESI
HHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA