| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897907
Identifier: 159897907
GI number: 159897907
Start: 1595488
End: 1595943
Strand: Reverse
Name: 159897907
Synonym: Haur_1381
Alternate gene names: NA
Gene position: 1595943-1595488 (Counterclockwise)
Preceding gene: 159897908
Following gene: 159897906
Centisome position: 25.15
GC content: 50.88
Gene sequence:
>456_bases ATGGCAGCCACGTCGGAAACACTAGACGACTGTGACAGCGGGCAACTTCCCCCCGCTTGGGTCGAAGCCTATGCACAACA GGTGCGTGACTGCTTCAGCCTTCAAGGATGGGATATCTATGTTCGTCCGATGACCAAAGAGCAACACGACGAGGAGCCAA CGACAGCGGGGCTTGCTCACGTCAATCATCGTTATTCAAATGCCGTGATTGAGTATTGGGATCAACAACCAGTAGAGCCA CTTAAACGGGTCTTGGTACATGAGTTTCTTCATATTCTCGTAGCACCGTTGACGACTTTGATTGAAGCCATGCTGCTCGA AATTCCTGTTAAACGGCGGGGCATGTTTATGCACGAAATGCAAATCCATGCCGAAGAGCAGGTTGTTACGGCACTGACAC GCATTATTTTCCCGCTGCTCCAGCAATCACTGGCAGCGCACGCAATAGAGGAGTAA
Upstream 100 bases:
>100_bases TCACCCATCCATGCATCCATCCATCCCGCGTTGGTGATCCACCCGCACGGGGATGTGAAGCGGCACCGAATCGAAAGCCA AAGGTATGGGAGTCAGTGCG
Downstream 100 bases:
>100_bases TTACCGATGGTTCGTTTTTTTCGCTCAATCAAATTGTTTGCTGCTGATAACGGCGGCGGTGGTTCCGGCAGTGGCGGCGG TGGCAATCCAGCGCCAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MAATSETLDDCDSGQLPPAWVEAYAQQVRDCFSLQGWDIYVRPMTKEQHDEEPTTAGLAHVNHRYSNAVIEYWDQQPVEP LKRVLVHEFLHILVAPLTTLIEAMLLEIPVKRRGMFMHEMQIHAEEQVVTALTRIIFPLLQQSLAAHAIEE
Sequences:
>Translated_151_residues MAATSETLDDCDSGQLPPAWVEAYAQQVRDCFSLQGWDIYVRPMTKEQHDEEPTTAGLAHVNHRYSNAVIEYWDQQPVEP LKRVLVHEFLHILVAPLTTLIEAMLLEIPVKRRGMFMHEMQIHAEEQVVTALTRIIFPLLQQSLAAHAIEE >Mature_150_residues AATSETLDDCDSGQLPPAWVEAYAQQVRDCFSLQGWDIYVRPMTKEQHDEEPTTAGLAHVNHRYSNAVIEYWDQQPVEPL KRVLVHEFLHILVAPLTTLIEAMLLEIPVKRRGMFMHEMQIHAEEQVVTALTRIIFPLLQQSLAAHAIEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17299; Mature: 17168
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATSETLDDCDSGQLPPAWVEAYAQQVRDCFSLQGWDIYVRPMTKEQHDEEPTTAGLAH CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHH VNHRYSNAVIEYWDQQPVEPLKRVLVHEFLHILVAPLTTLIEAMLLEIPVKRRGMFMHEM HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH QIHAEEQVVTALTRIIFPLLQQSLAAHAIEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AATSETLDDCDSGQLPPAWVEAYAQQVRDCFSLQGWDIYVRPMTKEQHDEEPTTAGLAH CCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHH VNHRYSNAVIEYWDQQPVEPLKRVLVHEFLHILVAPLTTLIEAMLLEIPVKRRGMFMHEM HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH QIHAEEQVVTALTRIIFPLLQQSLAAHAIEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA