| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159897906
Identifier: 159897906
GI number: 159897906
Start: 1594750
End: 1595481
Strand: Reverse
Name: 159897906
Synonym: Haur_1380
Alternate gene names: NA
Gene position: 1595481-1594750 (Counterclockwise)
Preceding gene: 159897907
Following gene: 159897905
Centisome position: 25.14
GC content: 57.51
Gene sequence:
>732_bases ATGGTTCGTTTTTTTCGCTCAATCAAATTGTTTGCTGCTGATAACGGCGGCGGTGGTTCCGGCAGTGGCGGCGGTGGCAA TCCAGCGCCAGCCAACCCGCCTGCGAATCCACCAGCTAATCCGCCCGCTAGTGGCGGAGGAAATCAACCCGATATTGCGG GTCAAATTGCCAATCTGATTGCTCGTCAAGGCAGCCCTGATGCTGCGCTGATGCTGCTCATGCAGGAAAACTATCAGTAT CGCGACCAGAATCGCCAGCTGCGCGAGCGTGTTCCTGATGGGGCCGTGGTGCTCAGCGGCGACGATGTGCAGCGCTGGCG GGACTATCAAGCGCTTGGTCAGCTCGATGAATTGCGCACCCGCTTGACCGAGCGCGAGCAAGCGCAAACCGAGCTGACTA ATCTCCGCACACAAGCCACCATTCGCACGGTTGCTGAAGCAATGCAGTGGAAGTCGAGTGTGCTGGAGCGCTTAGCAGGC AATGTCACATTTATCACCAAAACCGAGGGCGACAAGACCACGATCACCGTCAAGGATGGCGACGTGGAAACCCCACTCGA TGCCTATGCCGACAAACACTGGGGTGAATTCATGCCCGCTCTCAAAACTGATACAGCCCCCGCAGGGCGGGGAACGGGCT TTGTCCGCCAAGGTGCAGGCAATCCCAAGAACGACGACCCCATCACCACTCACAATCAACGGATGGGCTATAGCCTTCCG AAGCGAGGTTAA
Upstream 100 bases:
>100_bases AATCCATGCCGAAGAGCAGGTTGTTACGGCACTGACACGCATTATTTTCCCGCTGCTCCAGCAATCACTGGCAGCGCACG CAATAGAGGAGTAATTACCG
Downstream 100 bases:
>100_bases TCATGGCTGGAGTAATCGGTACCGTTAATCAACTTACCAGCCCAATTTGGGCAGGCGATTTCTTAGACCGCGAGCACTTA ATGCCCGGCGGAGCCACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MVRFFRSIKLFAADNGGGGSGSGGGGNPAPANPPANPPANPPASGGGNQPDIAGQIANLIARQGSPDAALMLLMQENYQY RDQNRQLRERVPDGAVVLSGDDVQRWRDYQALGQLDELRTRLTEREQAQTELTNLRTQATIRTVAEAMQWKSSVLERLAG NVTFITKTEGDKTTITVKDGDVETPLDAYADKHWGEFMPALKTDTAPAGRGTGFVRQGAGNPKNDDPITTHNQRMGYSLP KRG
Sequences:
>Translated_243_residues MVRFFRSIKLFAADNGGGGSGSGGGGNPAPANPPANPPANPPASGGGNQPDIAGQIANLIARQGSPDAALMLLMQENYQY RDQNRQLRERVPDGAVVLSGDDVQRWRDYQALGQLDELRTRLTEREQAQTELTNLRTQATIRTVAEAMQWKSSVLERLAG NVTFITKTEGDKTTITVKDGDVETPLDAYADKHWGEFMPALKTDTAPAGRGTGFVRQGAGNPKNDDPITTHNQRMGYSLP KRG >Mature_243_residues MVRFFRSIKLFAADNGGGGSGSGGGGNPAPANPPANPPANPPASGGGNQPDIAGQIANLIARQGSPDAALMLLMQENYQY RDQNRQLRERVPDGAVVLSGDDVQRWRDYQALGQLDELRTRLTEREQAQTELTNLRTQATIRTVAEAMQWKSSVLERLAG NVTFITKTEGDKTTITVKDGDVETPLDAYADKHWGEFMPALKTDTAPAGRGTGFVRQGAGNPKNDDPITTHNQRMGYSLP KRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26246; Mature: 26246
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRFFRSIKLFAADNGGGGSGSGGGGNPAPANPPANPPANPPASGGGNQPDIAGQIANLI CCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ARQGSPDAALMLLMQENYQYRDQNRQLRERVPDGAVVLSGDDVQRWRDYQALGQLDELRT HHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHH RLTEREQAQTELTNLRTQATIRTVAEAMQWKSSVLERLAGNVTFITKTEGDKTTITVKDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECC DVETPLDAYADKHWGEFMPALKTDTAPAGRGTGFVRQGAGNPKNDDPITTHNQRMGYSLP CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC KRG CCC >Mature Secondary Structure MVRFFRSIKLFAADNGGGGSGSGGGGNPAPANPPANPPANPPASGGGNQPDIAGQIANLI CCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH ARQGSPDAALMLLMQENYQYRDQNRQLRERVPDGAVVLSGDDVQRWRDYQALGQLDELRT HHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHH RLTEREQAQTELTNLRTQATIRTVAEAMQWKSSVLERLAGNVTFITKTEGDKTTITVKDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECC DVETPLDAYADKHWGEFMPALKTDTAPAGRGTGFVRQGAGNPKNDDPITTHNQRMGYSLP CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC KRG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA