| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897908
Identifier: 159897908
GI number: 159897908
Start: 1596197
End: 1597192
Strand: Reverse
Name: 159897908
Synonym: Haur_1382
Alternate gene names: NA
Gene position: 1597192-1596197 (Counterclockwise)
Preceding gene: 159897909
Following gene: 159897907
Centisome position: 25.17
GC content: 57.23
Gene sequence:
>996_bases ATGATCGACGCGGTTGCCATTGCCAATCAATTCCGTGCTGAGCTTCAGGCGCAGAACGCGAGTGCGATGGACGCGCTGAC CACACGCTGGCGCACGGTCGAAGCGGCGTTGCAGGCCGAAATGGAAGCGTTGGCGTTTCAAATGAGTCAGACCAAAGCTG ATGGGCAAACGGTCAGTGAATCGCAACTGTATGCGAACGAGCGCTACCAAGCGTTGTTGGTGCAGCTCCAGCGGGAATTG GCCAAGTACAACGCCGATGCAGCGGCCATCATGCAAGCCCAGCAGTTGAGTTTTGCCAGTATGGGCGCGGAGCAGGCCAC GGCGTGGTTGCGCTATTCCGGCGCGATTCAAGGGTCATTCACGCAGTTGAACAGCGGCGCATTTGAAAACATTGCCGCGT TGGCACGGGCTGACAATCCCTTGGCGCTCTTGCTGAGCAACGCCTATCCGGAAACGGCCCAAGCCATCACCGATGCCCTG TTGAGTGGCCTTGCGTTAGGGAAGAATCCGCGCATCACGGCGCGGATGATGGTCAATGACGGCTTAGCAACCAGTCTCAA TCATGCCTTGTTATTGACCCGTGATCAGTCGATTCGAGCAGCACGCTTGGCTGCGTTGCAGCAGTATCAAACGAGTGGCT TAGCCGACGCTTACATGCGCATCGCGGCACGCCAGCGGCGTACCTGTCTGGCATGTTTGGCGCTCGATGGTACGGTCTAT CCAACCAATGTGATGATGCCGCTACACCCTCAGTGCAGATGCACTATCGTGCCCATTTTAAGAGGCCGCGAGCCGCTGGC GATCCCAACGGGCAAGCAATGGTTTCTGCAACAGGACGCAGCAACCCAACGATCAATGCTTGGTCCAGGGCGCTACGCCT TATGGCAAAAGGGTGTCTTTCAGTTTGAAGATTTAGCAACCGTCCACAGCGGTGGGGTGTGGGGTGCAAACACCCAAGTC ACCACGGTCGAAGCATTACGGAGGATGGCGCAATGA
Upstream 100 bases:
>100_bases AAAAGCAGGCTCGTAGCGCTCGAAGTTTAGGCGCAGCCTTGGCAATGCAGCAAGCGCGACTTGATAGTGGTGCTGCTAGC ACCGGATTGGAGCAGCCCGC
Downstream 100 bases:
>100_bases TGGAATTCAATGATGCCGCGCAAGCAATGCGAGCACTACAGGCGGAGGTCGATTCAGCGTTCGCGTTGAAAGCGGAACAG CTTCGCGAATCGCTTCGGTC
Product: SPP1 family phage head morphogenesis protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MIDAVAIANQFRAELQAQNASAMDALTTRWRTVEAALQAEMEALAFQMSQTKADGQTVSESQLYANERYQALLVQLQREL AKYNADAAAIMQAQQLSFASMGAEQATAWLRYSGAIQGSFTQLNSGAFENIAALARADNPLALLLSNAYPETAQAITDAL LSGLALGKNPRITARMMVNDGLATSLNHALLLTRDQSIRAARLAALQQYQTSGLADAYMRIAARQRRTCLACLALDGTVY PTNVMMPLHPQCRCTIVPILRGREPLAIPTGKQWFLQQDAATQRSMLGPGRYALWQKGVFQFEDLATVHSGGVWGANTQV TTVEALRRMAQ
Sequences:
>Translated_331_residues MIDAVAIANQFRAELQAQNASAMDALTTRWRTVEAALQAEMEALAFQMSQTKADGQTVSESQLYANERYQALLVQLQREL AKYNADAAAIMQAQQLSFASMGAEQATAWLRYSGAIQGSFTQLNSGAFENIAALARADNPLALLLSNAYPETAQAITDAL LSGLALGKNPRITARMMVNDGLATSLNHALLLTRDQSIRAARLAALQQYQTSGLADAYMRIAARQRRTCLACLALDGTVY PTNVMMPLHPQCRCTIVPILRGREPLAIPTGKQWFLQQDAATQRSMLGPGRYALWQKGVFQFEDLATVHSGGVWGANTQV TTVEALRRMAQ >Mature_331_residues MIDAVAIANQFRAELQAQNASAMDALTTRWRTVEAALQAEMEALAFQMSQTKADGQTVSESQLYANERYQALLVQLQREL AKYNADAAAIMQAQQLSFASMGAEQATAWLRYSGAIQGSFTQLNSGAFENIAALARADNPLALLLSNAYPETAQAITDAL LSGLALGKNPRITARMMVNDGLATSLNHALLLTRDQSIRAARLAALQQYQTSGLADAYMRIAARQRRTCLACLALDGTVY PTNVMMPLHPQCRCTIVPILRGREPLAIPTGKQWFLQQDAATQRSMLGPGRYALWQKGVFQFEDLATVHSGGVWGANTQV TTVEALRRMAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36085; Mature: 36085
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDAVAIANQFRAELQAQNASAMDALTTRWRTVEAALQAEMEALAFQMSQTKADGQTVSE CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH SQLYANERYQALLVQLQRELAKYNADAAAIMQAQQLSFASMGAEQATAWLRYSGAIQGSF HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCH TQLNSGAFENIAALARADNPLALLLSNAYPETAQAITDALLSGLALGKNPRITARMMVND HHCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECC GLATSLNHALLLTRDQSIRAARLAALQQYQTSGLADAYMRIAARQRRTCLACLALDGTVY CCHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEECCEEC PTNVMMPLHPQCRCTIVPILRGREPLAIPTGKQWFLQQDAATQRSMLGPGRYALWQKGVF CCEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHCCHHHHHHHHCCCCHHHHHHCCCH QFEDLATVHSGGVWGANTQVTTVEALRRMAQ HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MIDAVAIANQFRAELQAQNASAMDALTTRWRTVEAALQAEMEALAFQMSQTKADGQTVSE CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH SQLYANERYQALLVQLQRELAKYNADAAAIMQAQQLSFASMGAEQATAWLRYSGAIQGSF HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCH TQLNSGAFENIAALARADNPLALLLSNAYPETAQAITDALLSGLALGKNPRITARMMVND HHCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECC GLATSLNHALLLTRDQSIRAARLAALQQYQTSGLADAYMRIAARQRRTCLACLALDGTVY CCHHHCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEEECCEEC PTNVMMPLHPQCRCTIVPILRGREPLAIPTGKQWFLQQDAATQRSMLGPGRYALWQKGVF CCEEEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHCCHHHHHHHHCCCCHHHHHHCCCH QFEDLATVHSGGVWGANTQVTTVEALRRMAQ HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA