| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897879
Identifier: 159897879
GI number: 159897879
Start: 1568272
End: 1569150
Strand: Reverse
Name: 159897879
Synonym: Haur_1353
Alternate gene names: NA
Gene position: 1569150-1568272 (Counterclockwise)
Preceding gene: 159897887
Following gene: 159897878
Centisome position: 24.72
GC content: 49.15
Gene sequence:
>879_bases ATGACAAAATTCCGAGGCGCGATTGAGTATGAAAAACCACCACCTGATGAACACAATGATATTCAGAATTTAATCACCAA CTTTCGTAGACTCAACAACATGTTCATTGCGGTTTCGTTTGTGCATATGGCATTCACCATGCTTGCGTTCACCCATGGTT TAGTTGGTTTCGCGTGGTTTATCGTGGCCTGCGCAACCATGGCCATGGTGCTGGGCATTGACTTGGCCTTGATGTGGTTG AGCGCTTACATCGGCATTCAACTCAAGCATAAACAACCCATTGGCTTTTGGAACTGGCTTGCGTTCATCATTGCGTTGGC CGTGGAAGTTACCTTCAATACCGCATCCTTGATCATCCACATGCCGCCAAGCATGGGCTTCTTTGGCTATCTGATTGCGG GCACATTTGGTTCTTTCGTTGCCCTGATCATCTATGCCAGCGCAACCGCCCCGAATCGCCTGCGCCAAACCATCGACTAT ATTAAACACCTTGAGCGCGTTGATGCTGAGAACGAGCGCAAGCGCCTCGAAGCCCAACGCAAACAGCAACGACAAACGGC CATGCAGGAGCGTTTTGAGCCATCAGAAAGCCACAACGAAACCATCGCAATGTTGCCTGAACCAGATGAATCAGCCGCTC TGCGCACCACCAATGGCAAGAGTGCGATCAGTGCTGATGATATTCACGCAATCCTGAAAGTTCTCTACGAAAAGAACATT ACCGAGTTCAAAACCAAACAAGACCTTCGCCGCTTGCTTGGTTTTACGTCAACCTCCAGTGGCACGAAAGCCTTTGATAC CTTGCAGCGGTATGCGATGGTCGAAGCTGGCGAAAGCGGCTACGAAATTATTTGGGAGAATGCCAACGCAATCAACTAA
Upstream 100 bases:
>100_bases CGCTCCAACGACACGTTCTGGTTGAAACCGAATAAGCGTGAGAAAAACATCGTCAGCAATGGCGGTGTTTTTCGTTTTAG GCTTCAGGAGCAACCAGTCT
Downstream 100 bases:
>100_bases CGAAAGCTTGGCATATTGCGCGAAACCACATCGGAGTGATGTGGTTTCGCTGTTTTAGGAGCAATGATGAGTCTTAAAAC CCGAAGCCCACTTGGCTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MTKFRGAIEYEKPPPDEHNDIQNLITNFRRLNNMFIAVSFVHMAFTMLAFTHGLVGFAWFIVACATMAMVLGIDLALMWL SAYIGIQLKHKQPIGFWNWLAFIIALAVEVTFNTASLIIHMPPSMGFFGYLIAGTFGSFVALIIYASATAPNRLRQTIDY IKHLERVDAENERKRLEAQRKQQRQTAMQERFEPSESHNETIAMLPEPDESAALRTTNGKSAISADDIHAILKVLYEKNI TEFKTKQDLRRLLGFTSTSSGTKAFDTLQRYAMVEAGESGYEIIWENANAIN
Sequences:
>Translated_292_residues MTKFRGAIEYEKPPPDEHNDIQNLITNFRRLNNMFIAVSFVHMAFTMLAFTHGLVGFAWFIVACATMAMVLGIDLALMWL SAYIGIQLKHKQPIGFWNWLAFIIALAVEVTFNTASLIIHMPPSMGFFGYLIAGTFGSFVALIIYASATAPNRLRQTIDY IKHLERVDAENERKRLEAQRKQQRQTAMQERFEPSESHNETIAMLPEPDESAALRTTNGKSAISADDIHAILKVLYEKNI TEFKTKQDLRRLLGFTSTSSGTKAFDTLQRYAMVEAGESGYEIIWENANAIN >Mature_291_residues TKFRGAIEYEKPPPDEHNDIQNLITNFRRLNNMFIAVSFVHMAFTMLAFTHGLVGFAWFIVACATMAMVLGIDLALMWLS AYIGIQLKHKQPIGFWNWLAFIIALAVEVTFNTASLIIHMPPSMGFFGYLIAGTFGSFVALIIYASATAPNRLRQTIDYI KHLERVDAENERKRLEAQRKQQRQTAMQERFEPSESHNETIAMLPEPDESAALRTTNGKSAISADDIHAILKVLYEKNIT EFKTKQDLRRLLGFTSTSSGTKAFDTLQRYAMVEAGESGYEIIWENANAIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33052; Mature: 32920
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFRGAIEYEKPPPDEHNDIQNLITNFRRLNNMFIAVSFVHMAFTMLAFTHGLVGFAWF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVACATMAMVLGIDLALMWLSAYIGIQLKHKQPIGFWNWLAFIIALAVEVTFNTASLIIH HHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE MPPSMGFFGYLIAGTFGSFVALIIYASATAPNRLRQTIDYIKHLERVDAENERKRLEAQR CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH KQQRQTAMQERFEPSESHNETIAMLPEPDESAALRTTNGKSAISADDIHAILKVLYEKNI HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCC TEFKTKQDLRRLLGFTSTSSGTKAFDTLQRYAMVEAGESGYEIIWENANAIN HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC >Mature Secondary Structure TKFRGAIEYEKPPPDEHNDIQNLITNFRRLNNMFIAVSFVHMAFTMLAFTHGLVGFAWF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVACATMAMVLGIDLALMWLSAYIGIQLKHKQPIGFWNWLAFIIALAVEVTFNTASLIIH HHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE MPPSMGFFGYLIAGTFGSFVALIIYASATAPNRLRQTIDYIKHLERVDAENERKRLEAQR CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH KQQRQTAMQERFEPSESHNETIAMLPEPDESAALRTTNGKSAISADDIHAILKVLYEKNI HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCC TEFKTKQDLRRLLGFTSTSSGTKAFDTLQRYAMVEAGESGYEIIWENANAIN HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA