| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897878
Identifier: 159897878
GI number: 159897878
Start: 1567588
End: 1568205
Strand: Reverse
Name: 159897878
Synonym: Haur_1352
Alternate gene names: NA
Gene position: 1568205-1567588 (Counterclockwise)
Preceding gene: 159897879
Following gene: 159897877
Centisome position: 24.71
GC content: 54.85
Gene sequence:
>618_bases ATGAGTCTTAAAACCCGAAGCCCACTTGGCTATATGCACCATCGCAACCGTGTGTTGGTTGCGCGAGGCTTGCCCCAAAA CGCGACGGTGAAAACCCGCTGGCAGTTCGTAAACCGCAGCCGTTTAATTGCGGAGGCGAGCATGCTGTTGATTTGGGTGG TCTTATGGATTGCCAATGGGATTGCCACGGCGAGCGCCGTCGTGCTCGGTGGTCTTTGGCTTCAATACCACGGCATATGG GTCCATGCTGGAGTGCTCGATTGGTTTGTGATCGGATGCTTGAGTCATGTGGTGGTTTCATTTGTTGGCCAACATCTCTG GCGCGGGGTAAATGTGCCAAACGAGCTACGCTGGTATCAGCAAGTACCCTACTTTTTCGTGCACGTCGATCGCATGCGAT TGACCTGTGCCGTGATCGTTAGTTCACTCGATGCCACGGCAACCGGCTGGTATATCCAAACAGTGTTGAATGATGTGTTT GGGTATCGCTGGTGGTTTGCGCTCGTGAGCGGATTGCTGGCCGCGCTGGTGGCCTTGAGTGCCGAGCCAATGATTCGCCA ATTTGTGCGTGGGGTGCGCGATGTGCTGAAAGGGACGGCTGCCTCATGCAAGGACTGA
Upstream 100 bases:
>100_bases AATTATTTGGGAGAATGCCAACGCAATCAACTAACGAAAGCTTGGCATATTGCGCGAAACCACATCGGAGTGATGTGGTT TCGCTGTTTTAGGAGCAATG
Downstream 100 bases:
>100_bases TCATTGTTATTACGCTGGTAGCTATTGTTGCTTCGGTCATCGTGATCACCAGTCGCCAGAAACCGCTTGTCATGCCCACG CGATCCACACCCGCCATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSLKTRSPLGYMHHRNRVLVARGLPQNATVKTRWQFVNRSRLIAEASMLLIWVVLWIANGIATASAVVLGGLWLQYHGIW VHAGVLDWFVIGCLSHVVVSFVGQHLWRGVNVPNELRWYQQVPYFFVHVDRMRLTCAVIVSSLDATATGWYIQTVLNDVF GYRWWFALVSGLLAALVALSAEPMIRQFVRGVRDVLKGTAASCKD
Sequences:
>Translated_205_residues MSLKTRSPLGYMHHRNRVLVARGLPQNATVKTRWQFVNRSRLIAEASMLLIWVVLWIANGIATASAVVLGGLWLQYHGIW VHAGVLDWFVIGCLSHVVVSFVGQHLWRGVNVPNELRWYQQVPYFFVHVDRMRLTCAVIVSSLDATATGWYIQTVLNDVF GYRWWFALVSGLLAALVALSAEPMIRQFVRGVRDVLKGTAASCKD >Mature_204_residues SLKTRSPLGYMHHRNRVLVARGLPQNATVKTRWQFVNRSRLIAEASMLLIWVVLWIANGIATASAVVLGGLWLQYHGIWV HAGVLDWFVIGCLSHVVVSFVGQHLWRGVNVPNELRWYQQVPYFFVHVDRMRLTCAVIVSSLDATATGWYIQTVLNDVFG YRWWFALVSGLLAALVALSAEPMIRQFVRGVRDVLKGTAASCKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23161; Mature: 23030
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKTRSPLGYMHHRNRVLVARGLPQNATVKTRWQFVNRSRLIAEASMLLIWVVLWIANG CCCCCCCCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATASAVVLGGLWLQYHGIWVHAGVLDWFVIGCLSHVVVSFVGQHLWRGVNVPNELRWYQ HHHHHHHHHHHHHHHHHCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH QVPYFFVHVDRMRLTCAVIVSSLDATATGWYIQTVLNDVFGYRWWFALVSGLLAALVALS HCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AEPMIRQFVRGVRDVLKGTAASCKD CCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLKTRSPLGYMHHRNRVLVARGLPQNATVKTRWQFVNRSRLIAEASMLLIWVVLWIANG CCCCCCCCHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IATASAVVLGGLWLQYHGIWVHAGVLDWFVIGCLSHVVVSFVGQHLWRGVNVPNELRWYQ HHHHHHHHHHHHHHHHHCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH QVPYFFVHVDRMRLTCAVIVSSLDATATGWYIQTVLNDVFGYRWWFALVSGLLAALVALS HCCCCEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AEPMIRQFVRGVRDVLKGTAASCKD CCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA