| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897887
Identifier: 159897887
GI number: 159897887
Start: 1573824
End: 1574603
Strand: Reverse
Name: 159897887
Synonym: Haur_1361
Alternate gene names: NA
Gene position: 1574603-1573824 (Counterclockwise)
Preceding gene: 159897888
Following gene: 159897879
Centisome position: 24.81
GC content: 29.1
Gene sequence:
>780_bases TTGAGAGTTATTGTAAAAAACACCAGAATCAAATTAATTAATCAGAGGGGATACCAAATGACAGAAGAAAAACAAAGCAA CCTTCAAGGTACTATCGGATTAATTCTTGCTGCACTTAGTATGGTAGTTCCAATAGTATGGAGTGGTATTGATAAAGACG TGAAGAGTCTCAGTTATGCAATCATATCAAGTAGTCAAATCGTTAGTATTAATGAAGAAGCCAAAGAGAAAATACAGATT ACATTTGATGGTACTCCCGTAGAAGATGTAAGGCTCATTCTCTTAGAAATAACTAATGATGGTGATATTCCAATCATAAA ATCTGATTATGAAATGCCAATTACTATAGAAATTGATAATCAAGAACAAATCCTCTCTGCTAATATAGTTGATGTTTCCC CTGAAAATCTCACAATACCCTTATCCGTAACAAATAAAAGAATCACACTAGATCCTGTATTACTAAACCCAGAGGATAAG ATTACAATTAAGATATTAATAAATAATCAATCAAATATAAATATATCATCACGAATAATTGGAATAAATAACATAAAAGA TACAACTATACCGAAAAAATCTATATCCTCAGTAGTTTTCTTGATATTTATAACATTTTCTGTTGTAGCTTATGCTCCTT TACTCATTATAGAGAACTTAAGGCGCAAAAAAAACTTACTAATATGGTTAAATTTGGTTTTTCAATTTATCGGATTTTCA ACCAATTTATTTGTATTAATAACGAACATGCAAGATTTAATAAAGTATTATCCTAATTAA
Upstream 100 bases:
>100_bases TTCCCATTTTTTAAGGTTTTGACTGGGTATACTATAGTATATTGCTTGAAGTCAAAAGGAGAAACTATTATAATCCTTAC AATTCTTTGATAGGTCATTA
Downstream 100 bases:
>100_bases TTGTCTATAACTGGTCTGACCACTCAATACCAAAATTTTCAGCCATTGGTCGTAGCTTCTGTAATATTGCAATAGTAGGC CTACTCATTAACGCATTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MRVIVKNTRIKLINQRGYQMTEEKQSNLQGTIGLILAALSMVVPIVWSGIDKDVKSLSYAIISSSQIVSINEEAKEKIQI TFDGTPVEDVRLILLEITNDGDIPIIKSDYEMPITIEIDNQEQILSANIVDVSPENLTIPLSVTNKRITLDPVLLNPEDK ITIKILINNQSNINISSRIIGINNIKDTTIPKKSISSVVFLIFITFSVVAYAPLLIIENLRRKKNLLIWLNLVFQFIGFS TNLFVLITNMQDLIKYYPN
Sequences:
>Translated_259_residues MRVIVKNTRIKLINQRGYQMTEEKQSNLQGTIGLILAALSMVVPIVWSGIDKDVKSLSYAIISSSQIVSINEEAKEKIQI TFDGTPVEDVRLILLEITNDGDIPIIKSDYEMPITIEIDNQEQILSANIVDVSPENLTIPLSVTNKRITLDPVLLNPEDK ITIKILINNQSNINISSRIIGINNIKDTTIPKKSISSVVFLIFITFSVVAYAPLLIIENLRRKKNLLIWLNLVFQFIGFS TNLFVLITNMQDLIKYYPN >Mature_259_residues MRVIVKNTRIKLINQRGYQMTEEKQSNLQGTIGLILAALSMVVPIVWSGIDKDVKSLSYAIISSSQIVSINEEAKEKIQI TFDGTPVEDVRLILLEITNDGDIPIIKSDYEMPITIEIDNQEQILSANIVDVSPENLTIPLSVTNKRITLDPVLLNPEDK ITIKILINNQSNINISSRIIGINNIKDTTIPKKSISSVVFLIFITFSVVAYAPLLIIENLRRKKNLLIWLNLVFQFIGFS TNLFVLITNMQDLIKYYPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29226; Mature: 29226
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVIVKNTRIKLINQRGYQMTEEKQSNLQGTIGLILAALSMVVPIVWSGIDKDVKSLSYA CEEEEECCEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHE IISSSQIVSINEEAKEKIQITFDGTPVEDVRLILLEITNDGDIPIIKSDYEMPITIEIDN EECCCEEEEECCCCCEEEEEEECCCCHHHEEEEEEEEECCCCEEEEECCCCCEEEEEECC QEQILSANIVDVSPENLTIPLSVTNKRITLDPVLLNPEDKITIKILINNQSNINISSRII CCCEEEEEEEEECCCCEEEEEEECCCEEEEEEEEECCCCCEEEEEEEECCCCCEEEEEEE GINNIKDTTIPKKSISSVVFLIFITFSVVAYAPLLIIENLRRKKNLLIWLNLVFQFIGFS EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCC TNLFVLITNMQDLIKYYPN CCEEEEEECHHHHHHHCCC >Mature Secondary Structure MRVIVKNTRIKLINQRGYQMTEEKQSNLQGTIGLILAALSMVVPIVWSGIDKDVKSLSYA CEEEEECCEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHE IISSSQIVSINEEAKEKIQITFDGTPVEDVRLILLEITNDGDIPIIKSDYEMPITIEIDN EECCCEEEEECCCCCEEEEEEECCCCHHHEEEEEEEEECCCCEEEEECCCCCEEEEEECC QEQILSANIVDVSPENLTIPLSVTNKRITLDPVLLNPEDKITIKILINNQSNINISSRII CCCEEEEEEEEECCCCEEEEEEECCCEEEEEEEEECCCCCEEEEEEEECCCCCEEEEEEE GINNIKDTTIPKKSISSVVFLIFITFSVVAYAPLLIIENLRRKKNLLIWLNLVFQFIGFS EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCC TNLFVLITNMQDLIKYYPN CCEEEEEECHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA