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The map label for this gene is ntcA [H]

Identifier: 159897820

GI number: 159897820

Start: 1501323

End: 1502240

Strand: Reverse

Name: ntcA [H]

Synonym: Haur_1291

Alternate gene names: 159897820

Gene position: 1502240-1501323 (Counterclockwise)

Preceding gene: 159897821

Following gene: 159897818

Centisome position: 23.67

GC content: 49.56

Gene sequence:

>918_bases
ATGTCAGCCTCATTTATTTTGTTAATTAATCACACCAGCACCGCCAGCATTCAAACCAACCTATTGATGGAGCATGGCTA
TATTCCAATGCTCTTGCCGTTGAATCAATTGGCTCAATTGCCAGCCCTACCACACCAAACCATCGTTGTCGCTTGTTTCA
ACAACCAAACTGAGCTTGAACAACTGACCACCACCCTGCCAACCTGGAATATGCCATGGATTGGCTGGAATTTGAGCGGC
CAGATCGAGCTTTCGATTGCGGCCTACAAAGCTAGCGCCGATATTGTGTTGACTGATAGTTGCACCGAGCAATTGTTGCT
GAATGTGCTTAGCCAGCGCAGCAACTATATCGCTGGCCAGAGCGACCCGATTGTCAAACAGCGCCAACGCCATTATCAAC
GGGGCACATTAATCAGACTGCCAGCCGAGCATATCTTATTAATTAATGAAGGTGTGGTAGGTTTAGCCACGTTGCATAGC
GATGGTTCGCAGGTGCTCGTCAGCTTATGCGGCCCACAACAGTTGGTGTATAGCACCGAGCAACAATCGAGCGTCCAGCT
GTACGCCCATAGCGATGTCGTTGGTCAAGTTTATGCTTGGGCGCAGGTTGCCGAGCATCCATCATTATTACAACGCCTGC
GCAGCCGATTAAGCCAAATGGAGCGTTGGGCATCGATGCAAGCCAATGGCTATAGCGATCAGCGCATTTTAGGCTTGTTG
GGATTATTAGCCGAGCAATTTGGCAAGCCAACTGAGCAAGGCACATTAATTGATATTCGCTTAACCCATGAACAACTTGC
CTCAGCAATTGGAGTCAATCGCACCACCACCACTCGCCTACTGCGCGATCTACGCAATCGTGGCTTGGTGTACACCGCTG
GCCATGGTGCCCAAGAGCGTTTTTGTTTGCCAAGTTAA

Upstream 100 bases:

>100_bases
CCACCGCGTTCTGCCTAACCATTCAATTCATGATGTCAAACTCCGAAAAGCTCAACCGTAGTTGAGTCGTTGTGGCATGA
TTTTGAAAGGAAGCAGCAGT

Downstream 100 bases:

>100_bases
CCTATATGTAATGGGTCATGGGGTTAACAACCAGTTCTCCCGTTCCCTCGCCCGCCACAGTGGGAGAGGGAACCACTGTC
GGCTCGCAGGCAGGAACAGG

Product: CRP/FNR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSASFILLINHTSTASIQTNLLMEHGYIPMLLPLNQLAQLPALPHQTIVVACFNNQTELEQLTTTLPTWNMPWIGWNLSG
QIELSIAAYKASADIVLTDSCTEQLLLNVLSQRSNYIAGQSDPIVKQRQRHYQRGTLIRLPAEHILLINEGVVGLATLHS
DGSQVLVSLCGPQQLVYSTEQQSSVQLYAHSDVVGQVYAWAQVAEHPSLLQRLRSRLSQMERWASMQANGYSDQRILGLL
GLLAEQFGKPTEQGTLIDIRLTHEQLASAIGVNRTTTTRLLRDLRNRGLVYTAGHGAQERFCLPS

Sequences:

>Translated_305_residues
MSASFILLINHTSTASIQTNLLMEHGYIPMLLPLNQLAQLPALPHQTIVVACFNNQTELEQLTTTLPTWNMPWIGWNLSG
QIELSIAAYKASADIVLTDSCTEQLLLNVLSQRSNYIAGQSDPIVKQRQRHYQRGTLIRLPAEHILLINEGVVGLATLHS
DGSQVLVSLCGPQQLVYSTEQQSSVQLYAHSDVVGQVYAWAQVAEHPSLLQRLRSRLSQMERWASMQANGYSDQRILGLL
GLLAEQFGKPTEQGTLIDIRLTHEQLASAIGVNRTTTTRLLRDLRNRGLVYTAGHGAQERFCLPS
>Mature_304_residues
SASFILLINHTSTASIQTNLLMEHGYIPMLLPLNQLAQLPALPHQTIVVACFNNQTELEQLTTTLPTWNMPWIGWNLSGQ
IELSIAAYKASADIVLTDSCTEQLLLNVLSQRSNYIAGQSDPIVKQRQRHYQRGTLIRLPAEHILLINEGVVGLATLHSD
GSQVLVSLCGPQQLVYSTEQQSSVQLYAHSDVVGQVYAWAQVAEHPSLLQRLRSRLSQMERWASMQANGYSDQRILGLLG
LLAEQFGKPTEQGTLIDIRLTHEQLASAIGVNRTTTTRLLRDLRNRGLVYTAGHGAQERFCLPS

Specific function: Required for full expression of proteins subject to ammonium repression. Transcriptional activator of genes subject to nitrogen control [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR022299
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 33871; Mature: 33740

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASFILLINHTSTASIQTNLLMEHGYIPMLLPLNQLAQLPALPHQTIVVACFNNQTELE
CCCEEEEEEECCCCCHHEEEEEHHCCCCEEEECHHHHHHCCCCCCCEEEEEEECCCHHHH
QLTTTLPTWNMPWIGWNLSGQIELSIAAYKASADIVLTDSCTEQLLLNVLSQRSNYIAGQ
HHHHHCCCCCCCEEEECCCCEEEEEEEEEECCCCEEEECHHHHHHHHHHHHHCCCCCCCC
SDPIVKQRQRHYQRGTLIRLPAEHILLINEGVVGLATLHSDGSQVLVSLCGPQQLVYSTE
CCCHHHHHHHHHHCCCEEEECHHEEEEEECCCEEEEEECCCCHHEEEECCCCHHHHCCCC
QQSSVQLYAHSDVVGQVYAWAQVAEHPSLLQRLRSRLSQMERWASMQANGYSDQRILGLL
CCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GLLAEQFGKPTEQGTLIDIRLTHEQLASAIGVNRTTTTRLLRDLRNRGLVYTAGHGAQER
HHHHHHHCCCCCCCEEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCCC
FCLPS
CCCCC
>Mature Secondary Structure 
SASFILLINHTSTASIQTNLLMEHGYIPMLLPLNQLAQLPALPHQTIVVACFNNQTELE
CCEEEEEEECCCCCHHEEEEEHHCCCCEEEECHHHHHHCCCCCCCEEEEEEECCCHHHH
QLTTTLPTWNMPWIGWNLSGQIELSIAAYKASADIVLTDSCTEQLLLNVLSQRSNYIAGQ
HHHHHCCCCCCCEEEECCCCEEEEEEEEEECCCCEEEECHHHHHHHHHHHHHCCCCCCCC
SDPIVKQRQRHYQRGTLIRLPAEHILLINEGVVGLATLHSDGSQVLVSLCGPQQLVYSTE
CCCHHHHHHHHHHCCCEEEECHHEEEEEECCCEEEEEECCCCHHEEEECCCCHHHHCCCC
QQSSVQLYAHSDVVGQVYAWAQVAEHPSLLQRLRSRLSQMERWASMQANGYSDQRILGLL
CCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GLLAEQFGKPTEQGTLIDIRLTHEQLASAIGVNRTTTTRLLRDLRNRGLVYTAGHGAQER
HHHHHHHCCCCCCCEEEEEEECHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCCC
FCLPS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1630321 [H]