| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is nadA
Identifier: 159897818
GI number: 159897818
Start: 1499254
End: 1500381
Strand: Reverse
Name: nadA
Synonym: Haur_1289
Alternate gene names: 159897818
Gene position: 1500381-1499254 (Counterclockwise)
Preceding gene: 159897820
Following gene: 159897816
Centisome position: 23.64
GC content: 50.98
Gene sequence:
>1128_bases ATGACCGTCATCGCAGCCGAAGCAATTGGCGTGGCACATGAACGTGCCGAGGACTATGCAGGGCTTTCAATCGAGGAATT GGATCAACGGATTGCTACGGCTAAGGCCAAATTGGGCGAACGTTTGGTGATTCTGGGCCATCACTATCAACGTGATGATG TGGTCAAGCATGCCGATTTAAGTGGCGATTCCTATGGGCTTTCGGTTGATGCACGCAAAACTGCCGCCGAATATATCGTC TTTTGTGGCGTTCACTTTATGGCCGAAAGCGCCGATATTCTCGGGCGCGACGACCAAACTGTGATTCTGCCCGACCATAC CGCTGGTTGCTCGATGGCTGATATGGCCGATATCGAACAGCTTGAAGAAGTTTGGGATGAGCTTGATGAGATTTTGGGTG ATGCCGAGGCTCAGGTAATGCCAATTACTTACGTCAACTCATCGGCAGCCGTCAAGGCTTTTGTCGGCGAACATGGCGGG GCTTGCTGCACCTCATCCAACGCTGAGCCAATTGTGCGCTGGGCCAAAAATCTCCGCCCCAAAATGCTGTTTCTGCCTGA TCAGCACCTTGGCCGCTATACCGCGTTTGCCAAGCTCGGCATTCCGCTCGATAAAATGTTGGTCTGGAATCCCAATTTAC GCTATGGTGGGCATACGCCAGAGGCCATTCGCGAGGCTGAAGTGTTGCTGTGGGCTGGTCACTGCTCGGTACACGCCCAA TTCCGCCCAGCCTACATCAAAGCTTGGCGCGAAAAACACCCCGAAATTAATGTGATTGTACACCCTGAATGCACCTTGGG CGTAACCAACGAGGCTGATTATGTTGGCTCAACGGCCTACATCATCAAAACGATCAACGAGGCTCCAGCAGGCAGTATGT GGGCGGTTGGCACCGAAATCAACTTGGTCAATCGTTTACAAACCAACAATCCTGATAAAACGATTGTCTCTGTCTCGCCG TTTGCCTGTCTTTGTTCAACCATGTATCGGATCGATCCTGAGGAATTATGTTGGGTTTTGGAGAATTTGGTCGAGGGCAA TGTCGTCAATCAAATCGCTGTGCCAACTGCCATCAAGCAAAAAGCCCGTTTGGCACTCGAACGAATGTTAGAGATTGCTG GTAATTAA
Upstream 100 bases:
>100_bases AATGACATTATTAGGGGCGTTTGATACGTCCCGCTCTTTTTCTCACGATTTATAGTGTCAAAATGACACTTACTAAATGT TTACCCAATGGAGAGTCATC
Downstream 100 bases:
>100_bases GCGTTTCCCTCACCCCCTAGCCCCCTCTCCCGCACGCGAGGCGAGGGGGAACCCATTCAGCATGAACGTTGGAATGCCCC TCGCCCGCCGCAGTGGGCGA
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MTVIAAEAIGVAHERAEDYAGLSIEELDQRIATAKAKLGERLVILGHHYQRDDVVKHADLSGDSYGLSVDARKTAAEYIV FCGVHFMAESADILGRDDQTVILPDHTAGCSMADMADIEQLEEVWDELDEILGDAEAQVMPITYVNSSAAVKAFVGEHGG ACCTSSNAEPIVRWAKNLRPKMLFLPDQHLGRYTAFAKLGIPLDKMLVWNPNLRYGGHTPEAIREAEVLLWAGHCSVHAQ FRPAYIKAWREKHPEINVIVHPECTLGVTNEADYVGSTAYIIKTINEAPAGSMWAVGTEINLVNRLQTNNPDKTIVSVSP FACLCSTMYRIDPEELCWVLENLVEGNVVNQIAVPTAIKQKARLALERMLEIAGN
Sequences:
>Translated_375_residues MTVIAAEAIGVAHERAEDYAGLSIEELDQRIATAKAKLGERLVILGHHYQRDDVVKHADLSGDSYGLSVDARKTAAEYIV FCGVHFMAESADILGRDDQTVILPDHTAGCSMADMADIEQLEEVWDELDEILGDAEAQVMPITYVNSSAAVKAFVGEHGG ACCTSSNAEPIVRWAKNLRPKMLFLPDQHLGRYTAFAKLGIPLDKMLVWNPNLRYGGHTPEAIREAEVLLWAGHCSVHAQ FRPAYIKAWREKHPEINVIVHPECTLGVTNEADYVGSTAYIIKTINEAPAGSMWAVGTEINLVNRLQTNNPDKTIVSVSP FACLCSTMYRIDPEELCWVLENLVEGNVVNQIAVPTAIKQKARLALERMLEIAGN >Mature_374_residues TVIAAEAIGVAHERAEDYAGLSIEELDQRIATAKAKLGERLVILGHHYQRDDVVKHADLSGDSYGLSVDARKTAAEYIVF CGVHFMAESADILGRDDQTVILPDHTAGCSMADMADIEQLEEVWDELDEILGDAEAQVMPITYVNSSAAVKAFVGEHGGA CCTSSNAEPIVRWAKNLRPKMLFLPDQHLGRYTAFAKLGIPLDKMLVWNPNLRYGGHTPEAIREAEVLLWAGHCSVHAQF RPAYIKAWREKHPEINVIVHPECTLGVTNEADYVGSTAYIIKTINEAPAGSMWAVGTEINLVNRLQTNNPDKTIVSVSPF ACLCSTMYRIDPEELCWVLENLVEGNVVNQIAVPTAIKQKARLALERMLEIAGN
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 3 subfamily
Homologues:
Organism=Escherichia coli, GI1786964, Length=365, Percent_Identity=26.5753424657534, Blast_Score=104, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NADA_HERA2 (A9B1Q2)
Other databases:
- EMBL: CP000875 - RefSeq: YP_001544065.1 - ProteinModelPortal: A9B1Q2 - SMR: A9B1Q2 - GeneID: 5733182 - GenomeReviews: CP000875_GR - KEGG: hau:Haur_1289 - HOGENOM: HBG291157 - OMA: GTELNLV - ProtClustDB: PRK09375 - BioCyc: HAUR316274:HAUR_1289-MONOMER - GO: GO:0005737 - HAMAP: MF_00569 - InterPro: IPR003473 - TIGRFAMs: TIGR00550
Pfam domain/function: PF02445 NadA
EC number: =2.5.1.72
Molecular weight: Translated: 41245; Mature: 41114
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: BINDING 47-47 BINDING 64-64 BINDING 144-144 BINDING 165-165 BINDING 261-261 BINDING 278-278
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVIAAEAIGVAHERAEDYAGLSIEELDQRIATAKAKLGERLVILGHHYQRDDVVKHADL CEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCC SGDSYGLSVDARKTAAEYIVFCGVHFMAESADILGRDDQTVILPDHTAGCSMADMADIEQ CCCCCEEEECHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEECCCCCCCCHHHHHHHHH LEEVWDELDEILGDAEAQVMPITYVNSSAAVKAFVGEHGGACCTSSNAEPIVRWAKNLRP HHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHCCCCCCEECCCCCHHHHHHHHCCCC KMLFLPDQHLGRYTAFAKLGIPLDKMLVWNPNLRYGGHTPEAIREAEVLLWAGHCSVHAQ EEEECCCHHCCHHHHHHHCCCCHHHEEEECCCCCCCCCCHHHHHCCEEEEEECCEEEEEE FRPAYIKAWREKHPEINVIVHPECTLGVTNEADYVGSTAYIIKTINEAPAGSMWAVGTEI CCHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEECCCH NLVNRLQTNNPDKTIVSVSPFACLCSTMYRIDPEELCWVLENLVEGNVVNQIAVPTAIKQ HHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHCCHHHHH KARLALERMLEIAGN HHHHHHHHHHHHHCC >Mature Secondary Structure TVIAAEAIGVAHERAEDYAGLSIEELDQRIATAKAKLGERLVILGHHYQRDDVVKHADL EEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCC SGDSYGLSVDARKTAAEYIVFCGVHFMAESADILGRDDQTVILPDHTAGCSMADMADIEQ CCCCCEEEECHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEECCCCCCCCHHHHHHHHH LEEVWDELDEILGDAEAQVMPITYVNSSAAVKAFVGEHGGACCTSSNAEPIVRWAKNLRP HHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHCCCCCCEECCCCCHHHHHHHHCCCC KMLFLPDQHLGRYTAFAKLGIPLDKMLVWNPNLRYGGHTPEAIREAEVLLWAGHCSVHAQ EEEECCCHHCCHHHHHHHCCCCHHHEEEECCCCCCCCCCHHHHHCCEEEEEECCEEEEEE FRPAYIKAWREKHPEINVIVHPECTLGVTNEADYVGSTAYIIKTINEAPAGSMWAVGTEI CCHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCEEEEEEECCCCCCCCEEEECCCH NLVNRLQTNNPDKTIVSVSPFACLCSTMYRIDPEELCWVLENLVEGNVVNQIAVPTAIKQ HHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHCCHHHHH KARLALERMLEIAGN HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA