Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159897821

Identifier: 159897821

GI number: 159897821

Start: 1502323

End: 1502730

Strand: Reverse

Name: 159897821

Synonym: Haur_1292

Alternate gene names: NA

Gene position: 1502730-1502323 (Counterclockwise)

Preceding gene: 159897822

Following gene: 159897820

Centisome position: 23.68

GC content: 51.47

Gene sequence:

>408_bases
ATGGCACATGCAGGCCAACAATTGGGACAACCCATCCGTCGCAGCAAGCTCAGCCGTTGGGGCTGGTTTTGCTGTTGCTA
CTTTATTCTGCAACTAGCGCTGATTTGCCCAATCGCCTGTATCATCCATGAATTAAGTTTCAGCAATTCCGCCCATGTTC
AAGCTAATCCTAGCACAGCTATGTTTGTCTGTCGGATCGAAACGCCCTCGGACAGCAGCCCCACTTCAGATCACATGCTG
AGCACTGCGCTGCATCGCCATCAACTGGTGGCTTTATTCGCAATGGTGCTGATTGGCCTGAATTTATTGCTCCAAGTCAA
ACCGCAAACCCAGCGCATCTATCAGCAACGGCTGCGTTTAGCCTCGTTTGATTTGCTACCCAAACTGCCCCCACCGCGTT
CTGCCTAA

Upstream 100 bases:

>100_bases
CATTGCTGGCCTCGTTTACAACCATTAATAATTGAGCCAATTCTGCACCAAAAGCTTAAATAATATGCTATGATGCCACT
AGTTTTGGTGGAACAAACTC

Downstream 100 bases:

>100_bases
CCATTCAATTCATGATGTCAAACTCCGAAAAGCTCAACCGTAGTTGAGTCGTTGTGGCATGATTTTGAAAGGAAGCAGCA
GTATGTCAGCCTCATTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MAHAGQQLGQPIRRSKLSRWGWFCCCYFILQLALICPIACIIHELSFSNSAHVQANPSTAMFVCRIETPSDSSPTSDHML
STALHRHQLVALFAMVLIGLNLLLQVKPQTQRIYQQRLRLASFDLLPKLPPPRSA

Sequences:

>Translated_135_residues
MAHAGQQLGQPIRRSKLSRWGWFCCCYFILQLALICPIACIIHELSFSNSAHVQANPSTAMFVCRIETPSDSSPTSDHML
STALHRHQLVALFAMVLIGLNLLLQVKPQTQRIYQQRLRLASFDLLPKLPPPRSA
>Mature_134_residues
AHAGQQLGQPIRRSKLSRWGWFCCCYFILQLALICPIACIIHELSFSNSAHVQANPSTAMFVCRIETPSDSSPTSDHMLS
TALHRHQLVALFAMVLIGLNLLLQVKPQTQRIYQQRLRLASFDLLPKLPPPRSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15179; Mature: 15048

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHAGQQLGQPIRRSKLSRWGWFCCCYFILQLALICPIACIIHELSFSNSAHVQANPSTA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCE
MFVCRIETPSDSSPTSDHMLSTALHRHQLVALFAMVLIGLNLLLQVKPQTQRIYQQRLRL
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ASFDLLPKLPPPRSA
HHHHHCCCCCCCCCC
>Mature Secondary Structure 
AHAGQQLGQPIRRSKLSRWGWFCCCYFILQLALICPIACIIHELSFSNSAHVQANPSTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCE
MFVCRIETPSDSSPTSDHMLSTALHRHQLVALFAMVLIGLNLLLQVKPQTQRIYQQRLRL
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ASFDLLPKLPPPRSA
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA