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The map label for this gene is hsdR [H]

Identifier: 159897812

GI number: 159897812

Start: 1493683

End: 1495980

Strand: Reverse

Name: hsdR [H]

Synonym: Haur_1283

Alternate gene names: 159897812

Gene position: 1495980-1493683 (Counterclockwise)

Preceding gene: 159897815

Following gene: 159897811

Centisome position: 23.57

GC content: 47.95

Gene sequence:

>2298_bases
ATGGATCGATCTGAGTTAAGCGAACGTGATATTCAAACCAAGTTCATTACTCCAGCATTGGTTCAAGCTGGCTGGACAGC
CGATTTTCATCTGCGTGAAGAGGTTCAATTAACTGCTGGACAAATTTTAGTCACGAATGGGGTCGTTCAGCGAGCGGCCA
AAAAATTTGCCGATTATGTGTTGTATCACGCACCCAATATTCCGCTGGCGGTGGTCGAGGCAAAAGATGCCAACCATGCA
GTCGGGGCTGGCATTCAACAGGCTTTGGGTTATGCCGATTTGCTTGATGTGCCCTTTATGTATAGTTCGAATGGCACTGG
TTTTATTGAGCATGATCGAACTGCGGCCCATGGCTTAGTGGAACGCTATTTGGAGCTCGATGAGTTTCCTTCGCCCGAGG
AGCTGTGGCGGCGTTATTGTGTTTGGAAGCAGCTAACTCCCAATCAGACTAGCCTGATCAATCAAGATTATTACCTCGAT
GGCTATGGCAAGGCTCCACGCTATTATCAAATGATTGCTATCAATCGCACGATTGAGGCAATTGCCCGTGGTCAACAACG
GATTTTATTGGTGATGGCAACTGGTACTGGGAAAACCTATACCGCCTTTCAAATTATTTGGCGCTTGTGGAAAGCCAAGG
TTAAAAAACGGATTCTTTTTTTGGCCGATCGGAATATTTTGGTCGATCAGGCTCGCAATAACGACTTTAAGCCCTTTGGC
AATGCCATGACCAAAATCAGCAATCGTGAGGCTAATACAGCATTTGAGATTTACCTCGCGCTCTATCAGGCTATGAGCGG
TAGCGAGGCTAGCCAGAATATTTATCGGCAGTTTTCGCCGACTTTTTTTGATCTCATCGTCATCGATGAGTGTCATCGAG
GCAGCGCCGCCGAAGATTCAGCTTGGCGACAGATTTTAGATTATTTTGCCAGTGCAACCCATATTGGGCTAACTGCCACG
CCCAAAGAAACCCAAACCATCTCAAATAGTGATTATTTTGGCGATCCACTGTATACCTATTCACTCAAACAAGGAATTGC
CGATGGCTTTCTTGCACCCTATAGTGTGCTGCGCGTGGCCACCAATGTTGATCTTGAGGGTTGGCGGCCTCAGCCAGGCC
AGCGTGATGCCGACGGTCAATTGATTGAAGATCGGCTCTACAATAGCCGCGATTTTGAGCGCATGGTTTTTTTAGATGAT
CGGATTCAGTTGGTCGCTGCCCGAATCGCGGAGTTTTTACGCAATCACGACCCTTACCAAAAAACCATTGTCTTTTGCCA
AAATATTGAGCACGCCGCCCGGATGCGCACCGCTATCGCCCAACATTGTAATGAGTTTGTTCAAGAAGATGCACGTTATG
TCATGCAAATTACTGGCGATAATCCTGAGGGTAAAGCTCAACTCGATATGTTTATCTTGCCCGATAGCCGTTATCCAGTG
GTCGTTACAACCTCGAAGTTGCTTACCACTGGCGTAGATGTGCAAACCTGTCGGTTGATTGTGATCGACCAATACTTGGA
ATCGATGACCGAGTTTAAGCAAATTATTGGACGGGGAACCCGCATTCGCGAGGATTATAATAAATTGTATTTTACAATTA
TGGATTTTCGCAATGTTACAACGCTGTTTAACGATCCGGAATTTGACGGTGATCCAGTTCAGGTTCAAAACTTCGGCGTT
GATCAAGCCTTGCCCACCGCAACCGCCGCGCCACCCGCCGAGGCCCAAACCACCAATATTCGCTACCAAATAGGCTCTGG
CGAAGTGGTGCATATTTTGGCTGAGCAGGTGCGCTACTACAGCAGCGATGGCCGCTTAATTACCGAATCGGTCGAGCATT
TTGCTCGCAACACCGTGCGCCAACGCTATACCACCCTCGCTAACTTTTTGCAGACATGGAGCCACGAAGCGCAAAAACAG
GCAATTGTGCAAGAGCTGGCAGCCCAAGGGATTTTGTTCGATAAACTTGCTGAAATTGTGGGATACGAGTACGATCCGTT
TGATCTGATTTGTCATGTTGCCTTTGATCAGCCAGCCCTGACGCGCCGCGAACGGGCCGAACAGGTGCGTAAACGTTCAT
ATTTTGCCCAATATGGCGAAAAAGCCCGGGCCGTGATTCAAGCACTCTTGGAAAAATACGCCGATCAGGGGTTAGCTACA
ATTCAAGATCGTCAGGTATTGCAGTTGCCAAGCTTTCAACAACTTGGCACGCCACGCGAAATTATTCAAGCGTTTGGCAG
TCTCGGCCAGTATCAGCAAGCCGTAGACGAGCTAGTGCGGCACTTATATGCTGCATAA

Upstream 100 bases:

>100_bases
GAAGGAGAGGGAATACGAAACACAATTGTAAACAGGTATCAATAGTAGTAGTCCAAAATTTGCTACAATTCAGATCCATC
CATTTGGCAGGGAGCAGACT

Downstream 100 bases:

>100_bases
TAAAAGGGTTGCATGAATCTCACTACAACCATCAAGAGCATTCAGGATATTATGCGCAAGGATGCTGGGGTCGATGGCGA
TGCCCAACGGATTGGTCAAT

Product: EcoEI R domain-containing protein

Products: NA

Alternate protein names: R.EcoAI [H]

Number of amino acids: Translated: 765; Mature: 765

Protein sequence:

>765_residues
MDRSELSERDIQTKFITPALVQAGWTADFHLREEVQLTAGQILVTNGVVQRAAKKFADYVLYHAPNIPLAVVEAKDANHA
VGAGIQQALGYADLLDVPFMYSSNGTGFIEHDRTAAHGLVERYLELDEFPSPEELWRRYCVWKQLTPNQTSLINQDYYLD
GYGKAPRYYQMIAINRTIEAIARGQQRILLVMATGTGKTYTAFQIIWRLWKAKVKKRILFLADRNILVDQARNNDFKPFG
NAMTKISNREANTAFEIYLALYQAMSGSEASQNIYRQFSPTFFDLIVIDECHRGSAAEDSAWRQILDYFASATHIGLTAT
PKETQTISNSDYFGDPLYTYSLKQGIADGFLAPYSVLRVATNVDLEGWRPQPGQRDADGQLIEDRLYNSRDFERMVFLDD
RIQLVAARIAEFLRNHDPYQKTIVFCQNIEHAARMRTAIAQHCNEFVQEDARYVMQITGDNPEGKAQLDMFILPDSRYPV
VVTTSKLLTTGVDVQTCRLIVIDQYLESMTEFKQIIGRGTRIREDYNKLYFTIMDFRNVTTLFNDPEFDGDPVQVQNFGV
DQALPTATAAPPAEAQTTNIRYQIGSGEVVHILAEQVRYYSSDGRLITESVEHFARNTVRQRYTTLANFLQTWSHEAQKQ
AIVQELAAQGILFDKLAEIVGYEYDPFDLICHVAFDQPALTRRERAEQVRKRSYFAQYGEKARAVIQALLEKYADQGLAT
IQDRQVLQLPSFQQLGTPREIIQAFGSLGQYQQAVDELVRHLYAA

Sequences:

>Translated_765_residues
MDRSELSERDIQTKFITPALVQAGWTADFHLREEVQLTAGQILVTNGVVQRAAKKFADYVLYHAPNIPLAVVEAKDANHA
VGAGIQQALGYADLLDVPFMYSSNGTGFIEHDRTAAHGLVERYLELDEFPSPEELWRRYCVWKQLTPNQTSLINQDYYLD
GYGKAPRYYQMIAINRTIEAIARGQQRILLVMATGTGKTYTAFQIIWRLWKAKVKKRILFLADRNILVDQARNNDFKPFG
NAMTKISNREANTAFEIYLALYQAMSGSEASQNIYRQFSPTFFDLIVIDECHRGSAAEDSAWRQILDYFASATHIGLTAT
PKETQTISNSDYFGDPLYTYSLKQGIADGFLAPYSVLRVATNVDLEGWRPQPGQRDADGQLIEDRLYNSRDFERMVFLDD
RIQLVAARIAEFLRNHDPYQKTIVFCQNIEHAARMRTAIAQHCNEFVQEDARYVMQITGDNPEGKAQLDMFILPDSRYPV
VVTTSKLLTTGVDVQTCRLIVIDQYLESMTEFKQIIGRGTRIREDYNKLYFTIMDFRNVTTLFNDPEFDGDPVQVQNFGV
DQALPTATAAPPAEAQTTNIRYQIGSGEVVHILAEQVRYYSSDGRLITESVEHFARNTVRQRYTTLANFLQTWSHEAQKQ
AIVQELAAQGILFDKLAEIVGYEYDPFDLICHVAFDQPALTRRERAEQVRKRSYFAQYGEKARAVIQALLEKYADQGLAT
IQDRQVLQLPSFQQLGTPREIIQAFGSLGQYQQAVDELVRHLYAA
>Mature_765_residues
MDRSELSERDIQTKFITPALVQAGWTADFHLREEVQLTAGQILVTNGVVQRAAKKFADYVLYHAPNIPLAVVEAKDANHA
VGAGIQQALGYADLLDVPFMYSSNGTGFIEHDRTAAHGLVERYLELDEFPSPEELWRRYCVWKQLTPNQTSLINQDYYLD
GYGKAPRYYQMIAINRTIEAIARGQQRILLVMATGTGKTYTAFQIIWRLWKAKVKKRILFLADRNILVDQARNNDFKPFG
NAMTKISNREANTAFEIYLALYQAMSGSEASQNIYRQFSPTFFDLIVIDECHRGSAAEDSAWRQILDYFASATHIGLTAT
PKETQTISNSDYFGDPLYTYSLKQGIADGFLAPYSVLRVATNVDLEGWRPQPGQRDADGQLIEDRLYNSRDFERMVFLDD
RIQLVAARIAEFLRNHDPYQKTIVFCQNIEHAARMRTAIAQHCNEFVQEDARYVMQITGDNPEGKAQLDMFILPDSRYPV
VVTTSKLLTTGVDVQTCRLIVIDQYLESMTEFKQIIGRGTRIREDYNKLYFTIMDFRNVTTLFNDPEFDGDPVQVQNFGV
DQALPTATAAPPAEAQTTNIRYQIGSGEVVHILAEQVRYYSSDGRLITESVEHFARNTVRQRYTTLANFLQTWSHEAQKQ
AIVQELAAQGILFDKLAEIVGYEYDPFDLICHVAFDQPALTRRERAEQVRKRSYFAQYGEKARAVIQALLEKYADQGLAT
IQDRQVLQLPSFQQLGTPREIIQAFGSLGQYQQAVDELVRHLYAA

Specific function: The EcoAI enzyme recognizes 5'-GAGN(7)GTCA-3'. Subunit R is required for both nuclease and ATPase activities, but not for modification [H]

COG id: COG4096

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI226510991, Length=626, Percent_Identity=28.9137380191693, Blast_Score=171, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935
- InterPro:   IPR013670
- InterPro:   IPR007409 [H]

Pfam domain/function: PF08463 EcoEI_R_C; PF04313 HSDR_N; PF04851 ResIII [H]

EC number: =3.1.21.3 [H]

Molecular weight: Translated: 87175; Mature: 87175

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRSELSERDIQTKFITPALVQAGWTADFHLREEVQLTAGQILVTNGVVQRAAKKFADYV
CCHHHHHHHHHHHHHCCHHHHHCCCCCCEEEHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
LYHAPNIPLAVVEAKDANHAVGAGIQQALGYADLLDVPFMYSSNGTGFIEHDRTAAHGLV
HEECCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHCCCEEECCCCCEEEECCCHHHHHHH
ERYLELDEFPSPEELWRRYCVWKQLTPNQTSLINQDYYLDGYGKAPRYYQMIAINRTIEA
HHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCEECCCCCCCCEEEEEEHHHHHHH
IARGQQRILLVMATGTGKTYTAFQIIWRLWKAKVKKRILFLADRNILVDQARNNDFKPFG
HHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCCCHHH
NAMTKISNREANTAFEIYLALYQAMSGSEASQNIYRQFSPTFFDLIVIDECHRGSAAEDS
HHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHH
AWRQILDYFASATHIGLTATPKETQTISNSDYFGDPLYTYSLKQGIADGFLAPYSVLRVA
HHHHHHHHHHHHHCCCEECCCCHHCCCCCCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHH
TNVDLEGWRPQPGQRDADGQLIEDRLYNSRDFERMVFLDDRIQLVAARIAEFLRNHDPYQ
HCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHH
KTIVFCQNIEHAARMRTAIAQHCNEFVQEDARYVMQITGDNPEGKAQLDMFILPDSRYPV
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEEECCCCCCE
VVTTSKLLTTGVDVQTCRLIVIDQYLESMTEFKQIIGRGTRIREDYNKLYFTIMDFRNVT
EEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEHHHHHH
TLFNDPEFDGDPVQVQNFGVDQALPTATAAPPAEAQTTNIRYQIGSGEVVHILAEQVRYY
HHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHH
SSDGRLITESVEHFARNTVRQRYTTLANFLQTWSHEAQKQAIVQELAAQGILFDKLAEIV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GYEYDPFDLICHVAFDQPALTRRERAEQVRKRSYFAQYGEKARAVIQALLEKYADQGLAT
CCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IQDRQVLQLPSFQQLGTPREIIQAFGSLGQYQQAVDELVRHLYAA
CCCCHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDRSELSERDIQTKFITPALVQAGWTADFHLREEVQLTAGQILVTNGVVQRAAKKFADYV
CCHHHHHHHHHHHHHCCHHHHHCCCCCCEEEHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
LYHAPNIPLAVVEAKDANHAVGAGIQQALGYADLLDVPFMYSSNGTGFIEHDRTAAHGLV
HEECCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHCCCEEECCCCCEEEECCCHHHHHHH
ERYLELDEFPSPEELWRRYCVWKQLTPNQTSLINQDYYLDGYGKAPRYYQMIAINRTIEA
HHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCEECCCCCCCCEEEEEEHHHHHHH
IARGQQRILLVMATGTGKTYTAFQIIWRLWKAKVKKRILFLADRNILVDQARNNDFKPFG
HHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCCCCCHHH
NAMTKISNREANTAFEIYLALYQAMSGSEASQNIYRQFSPTFFDLIVIDECHRGSAAEDS
HHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHH
AWRQILDYFASATHIGLTATPKETQTISNSDYFGDPLYTYSLKQGIADGFLAPYSVLRVA
HHHHHHHHHHHHHCCCEECCCCHHCCCCCCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHH
TNVDLEGWRPQPGQRDADGQLIEDRLYNSRDFERMVFLDDRIQLVAARIAEFLRNHDPYQ
HCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCHH
KTIVFCQNIEHAARMRTAIAQHCNEFVQEDARYVMQITGDNPEGKAQLDMFILPDSRYPV
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEEECCCCCCE
VVTTSKLLTTGVDVQTCRLIVIDQYLESMTEFKQIIGRGTRIREDYNKLYFTIMDFRNVT
EEEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEHHHHHH
TLFNDPEFDGDPVQVQNFGVDQALPTATAAPPAEAQTTNIRYQIGSGEVVHILAEQVRYY
HHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHH
SSDGRLITESVEHFARNTVRQRYTTLANFLQTWSHEAQKQAIVQELAAQGILFDKLAEIV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
GYEYDPFDLICHVAFDQPALTRRERAEQVRKRSYFAQYGEKARAVIQALLEKYADQGLAT
CCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IQDRQVLQLPSFQQLGTPREIIQAFGSLGQYQQAVDELVRHLYAA
CCCCHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412658 [H]