| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897815
Identifier: 159897815
GI number: 159897815
Start: 1497200
End: 1497766
Strand: Reverse
Name: 159897815
Synonym: Haur_1286
Alternate gene names: NA
Gene position: 1497766-1497200 (Counterclockwise)
Preceding gene: 159897816
Following gene: 159897812
Centisome position: 23.6
GC content: 49.74
Gene sequence:
>567_bases ATGACCAACAAGAGTTTATGGCACCAAATAAATGAGCCAACTATGCCTGCTACACCGATTTCGGCTTCGTACTGGGTGCT CCCAGGATGTTTGCTGGCGGGCGAACATCCCATGCTGTTGGAAAAAGAGCCGTTGCATGAGCGTTTACAGCACTTCAGCA AGGCCAAAATCACTGTTTTTATTGATCTGACTGAGGAAACAGAAACTCAGGAATTGGGCGATTACAGCGCGGCGCTGCAC CAAATTCAAGCAAGCCCAGCGCTTGTTCGCCATCATTTCCCAATCCCTGATATGCACATTCCATCAATTCCTCAGATACA AGCGATTCTGGCTCAAATAATAAGTGCGCTTGATCAGCAACAAAATGTGTATGTACATTGTTGGGGTGGGCTAGGCCGAA CTGGCACAGTCATTGGCTGCTTGCTCGTCGAACAAGGCTGGGAATATGCCCAAGCCTTGGCGCAGATCGTAAACCTACGC CAAGCCACTCGCGACTCGCGCTATCCATCGCCAAGCAATGATCTGCAACGCCAATTCGTGGCAGATTGGGCTATGCAGGT TCAATAG
Upstream 100 bases:
>100_bases CAGAATTGGCGATTGAGGCATTTTTTCCAGCCAATGCTGCCACCGCCGAACATTTGCGCCAGTTGCATGCAGCCAAGGCT AGTCGATAAGCGAGTTATGG
Downstream 100 bases:
>100_bases CCTGATTGCCCATGGAGCTATTACTTACATTTTGGGCTGGGTTAGGCTGAATATATTGCCAAAGGGATCTTTGAAGGTGG CTTCGATGCCGTAAAATTGC
Product: dual specificity protein phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MTNKSLWHQINEPTMPATPISASYWVLPGCLLAGEHPMLLEKEPLHERLQHFSKAKITVFIDLTEETETQELGDYSAALH QIQASPALVRHHFPIPDMHIPSIPQIQAILAQIISALDQQQNVYVHCWGGLGRTGTVIGCLLVEQGWEYAQALAQIVNLR QATRDSRYPSPSNDLQRQFVADWAMQVQ
Sequences:
>Translated_188_residues MTNKSLWHQINEPTMPATPISASYWVLPGCLLAGEHPMLLEKEPLHERLQHFSKAKITVFIDLTEETETQELGDYSAALH QIQASPALVRHHFPIPDMHIPSIPQIQAILAQIISALDQQQNVYVHCWGGLGRTGTVIGCLLVEQGWEYAQALAQIVNLR QATRDSRYPSPSNDLQRQFVADWAMQVQ >Mature_187_residues TNKSLWHQINEPTMPATPISASYWVLPGCLLAGEHPMLLEKEPLHERLQHFSKAKITVFIDLTEETETQELGDYSAALHQ IQASPALVRHHFPIPDMHIPSIPQIQAILAQIISALDQQQNVYVHCWGGLGRTGTVIGCLLVEQGWEYAQALAQIVNLRQ ATRDSRYPSPSNDLQRQFVADWAMQVQ
Specific function: Unknown
COG id: COG2453
COG function: function code T; Predicted protein-tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21182; Mature: 21051
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKSLWHQINEPTMPATPISASYWVLPGCLLAGEHPMLLEKEPLHERLQHFSKAKITVF CCCHHHHHHCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEE IDLTEETETQELGDYSAALHQIQASPALVRHHFPIPDMHIPSIPQIQAILAQIISALDQQ EEECCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC QNVYVHCWGGLGRTGTVIGCLLVEQGWEYAQALAQIVNLRQATRDSRYPSPSNDLQRQFV CCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH ADWAMQVQ HHHHHHCC >Mature Secondary Structure TNKSLWHQINEPTMPATPISASYWVLPGCLLAGEHPMLLEKEPLHERLQHFSKAKITVF CCHHHHHHCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEE IDLTEETETQELGDYSAALHQIQASPALVRHHFPIPDMHIPSIPQIQAILAQIISALDQQ EEECCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC QNVYVHCWGGLGRTGTVIGCLLVEQGWEYAQALAQIVNLRQATRDSRYPSPSNDLQRQFV CCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH ADWAMQVQ HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA