| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897797
Identifier: 159897797
GI number: 159897797
Start: 1478981
End: 1480213
Strand: Direct
Name: 159897797
Synonym: Haur_1268
Alternate gene names: NA
Gene position: 1478981-1480213 (Clockwise)
Preceding gene: 159897796
Following gene: 159897798
Centisome position: 23.3
GC content: 56.61
Gene sequence:
>1233_bases ATGGGCTATAGGGTCTTTGTGGTAGCTGGTGATAATCCGGTGCTTCAATCGCTGAGTACGGCTGTCACAGGCGAAATTGA GCTTTCTATGTTGCAATCTTCCAACGAGGCGTTGTGGGAGTTGCAGCAAATTGCGCCCGATGTCTTGATTGCCGATTATG ATTTGCCCGGGTTTAGCGGCCTGGATTTGGCTGATCTTGTGCCAAATTTTGCGCCCGACACGCGGGTGATTCTGGTGGCA CGTTCGGCCAATCCTGAGGTTGCTGAACAAGCGGCGCAACGTGGAGTATTTCGCTTCATCGACCGTAATTTAACTGCGGT GTTAGTGCTTGATGCTTTAGATGAAGCCTTGCAAGCCGTCCCGCCACCGCGTCCGGTCGAGCCAGAGCCTGTTTATGAAC CAGAACCTGAGCCAGAACCACAGCCTGAAGCTCCTGCTCGCTTTGCCCCGCCGCCAAGCGTTTCCAAAGCACCTGCGCCA GCGCGAATGGGTGGGCCACCGCCAGTTTCCAAAGCACCAACCCCTGTAGCACGTTCGACTGCGCCCGCCAGCGTGAGCAA AGCGCCGCCGCCAGTTAGCCCGCGGCCAACTGCGCCACCTCAGCGAACGCGCACCGCGCCGCCGCCAGTCAGCGCCCGCC CAACTCCGGTTTCACGTTCCGCGCCACCGCCGGTTAGTCCACGGCCTGCGACCCAACAACCAAACCGCCAAGCACCTGCG CCAGCGCGGCCAACCGCGCCCGCCCAACAAACCCCGCCACCTGCGCAACAAGCGCCACCACCTGCGCCAACCACGAATTT TGATGATTCGTTTGGCTCGAAACTGCGTAGTGGTGGTTCTTTGGTGCTCACTGCCGAAACTTTGGCTCCTTTGGTAGCAA AACTCAAGGATCTCGGCGTTCAGCTTGGGGCGCAATCAACGATTTTGACCGACCGTTGGGGCGTGCCCTTGGTTGAAGAA GGCCATACTTCGTTACCCTTGCCGCCATTTTTGCCTTTGTTGGCCACTAGTTTCTCAACAATGGTCGATTATACCCGTCA ATTGCATAACGACCCAGGCAGCGGCCTGTATATGCACGAAGGCGATATTTACGATTTCTATATTTTTGACGTTGGCAGGC AATTTTTGCTGGTCATGGTCTTTGATAAAACCATCGCTGCCCCCAAACTTGGTACGGTCTGGCTCTATGCCAAACGAGCC GTGCGCGAATTAGCCGACGAGCTTGAGGGTTAA
Upstream 100 bases:
>100_bases ATAATGGTCATGTTTGGGTTCAAAGCGAAGAAGGTCGCGGCAGTACGTTTACGGTTGCACTGCCACAGCGGGGGCTTTAG CCTCACAGGTAGGAGTTTGT
Downstream 100 bases:
>100_bases TTGCCATTTTAACCAGGCTCGGTAGTCAATCTCAACAACTACCGAGCCTCGTTTTCAACCACTTTCACCCGCTAAGCCAG CCCATGTTAATCCTTCGGTT
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator Receiver
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MGYRVFVVAGDNPVLQSLSTAVTGEIELSMLQSSNEALWELQQIAPDVLIADYDLPGFSGLDLADLVPNFAPDTRVILVA RSANPEVAEQAAQRGVFRFIDRNLTAVLVLDALDEALQAVPPPRPVEPEPVYEPEPEPEPQPEAPARFAPPPSVSKAPAP ARMGGPPPVSKAPTPVARSTAPASVSKAPPPVSPRPTAPPQRTRTAPPPVSARPTPVSRSAPPPVSPRPATQQPNRQAPA PARPTAPAQQTPPPAQQAPPPAPTTNFDDSFGSKLRSGGSLVLTAETLAPLVAKLKDLGVQLGAQSTILTDRWGVPLVEE GHTSLPLPPFLPLLATSFSTMVDYTRQLHNDPGSGLYMHEGDIYDFYIFDVGRQFLLVMVFDKTIAAPKLGTVWLYAKRA VRELADELEG
Sequences:
>Translated_410_residues MGYRVFVVAGDNPVLQSLSTAVTGEIELSMLQSSNEALWELQQIAPDVLIADYDLPGFSGLDLADLVPNFAPDTRVILVA RSANPEVAEQAAQRGVFRFIDRNLTAVLVLDALDEALQAVPPPRPVEPEPVYEPEPEPEPQPEAPARFAPPPSVSKAPAP ARMGGPPPVSKAPTPVARSTAPASVSKAPPPVSPRPTAPPQRTRTAPPPVSARPTPVSRSAPPPVSPRPATQQPNRQAPA PARPTAPAQQTPPPAQQAPPPAPTTNFDDSFGSKLRSGGSLVLTAETLAPLVAKLKDLGVQLGAQSTILTDRWGVPLVEE GHTSLPLPPFLPLLATSFSTMVDYTRQLHNDPGSGLYMHEGDIYDFYIFDVGRQFLLVMVFDKTIAAPKLGTVWLYAKRA VRELADELEG >Mature_409_residues GYRVFVVAGDNPVLQSLSTAVTGEIELSMLQSSNEALWELQQIAPDVLIADYDLPGFSGLDLADLVPNFAPDTRVILVAR SANPEVAEQAAQRGVFRFIDRNLTAVLVLDALDEALQAVPPPRPVEPEPVYEPEPEPEPQPEAPARFAPPPSVSKAPAPA RMGGPPPVSKAPTPVARSTAPASVSKAPPPVSPRPTAPPQRTRTAPPPVSARPTPVSRSAPPPVSPRPATQQPNRQAPAP ARPTAPAQQTPPPAQQAPPPAPTTNFDDSFGSKLRSGGSLVLTAETLAPLVAKLKDLGVQLGAQSTILTDRWGVPLVEEG HTSLPLPPFLPLLATSFSTMVDYTRQLHNDPGSGLYMHEGDIYDFYIFDVGRQFLLVMVFDKTIAAPKLGTVWLYAKRAV RELADELEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43702; Mature: 43571
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYRVFVVAGDNPVLQSLSTAVTGEIELSMLQSSNEALWELQQIAPDVLIADYDLPGFSG CCEEEEEEECCCHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHCCCEEEEECCCCCCCC LDLADLVPNFAPDTRVILVARSANPEVAEQAAQRGVFRFIDRNLTAVLVLDALDEALQAV CCHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHC PPPRPVEPEPVYEPEPEPEPQPEAPARFAPPPSVSKAPAPARMGGPPPVSKAPTPVARST CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APASVSKAPPPVSPRPTAPPQRTRTAPPPVSARPTPVSRSAPPPVSPRPATQQPNRQAPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PARPTAPAQQTPPPAQQAPPPAPTTNFDDSFGSKLRSGGSLVLTAETLAPLVAKLKDLGV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH QLGAQSTILTDRWGVPLVEEGHTSLPLPPFLPLLATSFSTMVDYTRQLHNDPGSGLYMHE HCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC GDIYDFYIFDVGRQFLLVMVFDKTIAAPKLGTVWLYAKRAVRELADELEG CCEEEEEEEECCCHHEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GYRVFVVAGDNPVLQSLSTAVTGEIELSMLQSSNEALWELQQIAPDVLIADYDLPGFSG CEEEEEEECCCHHHHHHHHHHCCCEEEEEHHCCCHHHHHHHHHCCCEEEEECCCCCCCC LDLADLVPNFAPDTRVILVARSANPEVAEQAAQRGVFRFIDRNLTAVLVLDALDEALQAV CCHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHC PPPRPVEPEPVYEPEPEPEPQPEAPARFAPPPSVSKAPAPARMGGPPPVSKAPTPVARST CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APASVSKAPPPVSPRPTAPPQRTRTAPPPVSARPTPVSRSAPPPVSPRPATQQPNRQAPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PARPTAPAQQTPPPAQQAPPPAPTTNFDDSFGSKLRSGGSLVLTAETLAPLVAKLKDLGV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH QLGAQSTILTDRWGVPLVEEGHTSLPLPPFLPLLATSFSTMVDYTRQLHNDPGSGLYMHE HCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC GDIYDFYIFDVGRQFLLVMVFDKTIAAPKLGTVWLYAKRAVRELADELEG CCEEEEEEEECCCHHEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA