| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897798
Identifier: 159897798
GI number: 159897798
Start: 1480413
End: 1481576
Strand: Direct
Name: 159897798
Synonym: Haur_1269
Alternate gene names: NA
Gene position: 1480413-1481576 (Clockwise)
Preceding gene: 159897797
Following gene: 159897799
Centisome position: 23.33
GC content: 53.18
Gene sequence:
>1164_bases ATGACGACACACGCAGCTACCGGTGCATCGCAGATTGAGCACAGCTATGATGCTGGTTTCGCCGCCGCCCAGCAAGCCTG TACGCAGCTTGCCCCCCATTCGCCAACCTGTCTGATCGCCTTTACCACTGATGCCTATGATCAGGCCGCCGTTGTTCAAG GCATTCGTGCAGCAAGCCAACAAGCGCCATTAATCGGCTGTTGTGCTGGCGGCATTATTAGCAATGCCGGCACTTTTACC CATGGTGTGGTGCTACTCGCACTGGCTTCCGATGATCTCAAGCTGGATTTGAGCCTTGTCGCAGGGGTCAAAGCCGATCC GGGCAAGGTTGCCGATCAGTTGGCTGATCAATTAGAGGCTGTTTTAGATAACCCCACTAGTCAACAAGCTGCCTTGATCT TGGTCGATGGTTTGGCTGGCACCTTGACCGATTTTGTGCAGCATGCCACCGCTGCTTTTGGCCCGTTATGCCCGCTGGTT GGTGGCGGCGCTGGCGATAGCTTCCAATTCAAACAAACCTATCAATTTGTCAACGATCAGGTCATTAGCGATGGTGCGGC AGTCGGCCTATTGCAATCGCCAACTCCGATGGGCATTGGGGTACAACATGGCTGGGAGCCTGCTGCAAGAGGTTTGGTGG TTACACGCAGCGAAGGCACAATTATTTACGAGCTTGATGGACGGCCTGCCTTTGCAGTCTATCAAGAGCTTTTCCCCGAT TTGACAGTGGAAAATTTCGGGCGCTTTGTGATCGATCATCCGATTGGCTTGCCCCAAATTAATGGCGAATTTTTGATTCG CGACCCGTTGCGCACCCATCCTGATGGCTCGATCGAATGCATTGCCAGCGTGCCCAAAAATGTGGTCGCGCATATTATGC ATGGCTCGCATGAAACCTTGTTCAACGCTGCTCAACTGGCCACGAAACGGGCCTTGGCTGCGCTAAATGGGCCACCAGCA GCATTAATTATTTTCGATTGTGTTTCGCGTCTGGCAATGTTGGGCGATGCAGCCGCCACCGAAGTGCAACGCATTCGCGA AGTTGCTGGCTTGGATGTGCCAGTTGTCGGTATGTTTAGCTTTGGCGAAATTGCTGCTGCGGAAACAGGCGGAGCGCTGT TTCATAACAAAACCGTTGTTGTGTACGCTATTGGTCAGGCCTGA
Upstream 100 bases:
>100_bases TTATTGCCTATATTCTAGTTGCCATCGTATCCTAGGCCTAGCTAATCCGCACTTGCGACAAAGCAGTCACTGCATCTTTT GTGTTGTGAGGTATTCCACA
Downstream 100 bases:
>100_bases CCATTGAACGGATGAACCTTGTATGCTCAATCGTGAAATCGAACTTGCCATCCTCTATGAAATTTCATCGCTGCCTTTAA CGCTCACAACGATTGAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MTTHAATGASQIEHSYDAGFAAAQQACTQLAPHSPTCLIAFTTDAYDQAAVVQGIRAASQQAPLIGCCAGGIISNAGTFT HGVVLLALASDDLKLDLSLVAGVKADPGKVADQLADQLEAVLDNPTSQQAALILVDGLAGTLTDFVQHATAAFGPLCPLV GGGAGDSFQFKQTYQFVNDQVISDGAAVGLLQSPTPMGIGVQHGWEPAARGLVVTRSEGTIIYELDGRPAFAVYQELFPD LTVENFGRFVIDHPIGLPQINGEFLIRDPLRTHPDGSIECIASVPKNVVAHIMHGSHETLFNAAQLATKRALAALNGPPA ALIIFDCVSRLAMLGDAAATEVQRIREVAGLDVPVVGMFSFGEIAAAETGGALFHNKTVVVYAIGQA
Sequences:
>Translated_387_residues MTTHAATGASQIEHSYDAGFAAAQQACTQLAPHSPTCLIAFTTDAYDQAAVVQGIRAASQQAPLIGCCAGGIISNAGTFT HGVVLLALASDDLKLDLSLVAGVKADPGKVADQLADQLEAVLDNPTSQQAALILVDGLAGTLTDFVQHATAAFGPLCPLV GGGAGDSFQFKQTYQFVNDQVISDGAAVGLLQSPTPMGIGVQHGWEPAARGLVVTRSEGTIIYELDGRPAFAVYQELFPD LTVENFGRFVIDHPIGLPQINGEFLIRDPLRTHPDGSIECIASVPKNVVAHIMHGSHETLFNAAQLATKRALAALNGPPA ALIIFDCVSRLAMLGDAAATEVQRIREVAGLDVPVVGMFSFGEIAAAETGGALFHNKTVVVYAIGQA >Mature_386_residues TTHAATGASQIEHSYDAGFAAAQQACTQLAPHSPTCLIAFTTDAYDQAAVVQGIRAASQQAPLIGCCAGGIISNAGTFTH GVVLLALASDDLKLDLSLVAGVKADPGKVADQLADQLEAVLDNPTSQQAALILVDGLAGTLTDFVQHATAAFGPLCPLVG GGAGDSFQFKQTYQFVNDQVISDGAAVGLLQSPTPMGIGVQHGWEPAARGLVVTRSEGTIIYELDGRPAFAVYQELFPDL TVENFGRFVIDHPIGLPQINGEFLIRDPLRTHPDGSIECIASVPKNVVAHIMHGSHETLFNAAQLATKRALAALNGPPAA LIIFDCVSRLAMLGDAAATEVQRIREVAGLDVPVVGMFSFGEIAAAETGGALFHNKTVVVYAIGQA
Specific function: Unknown
COG id: COG3287
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019494 - InterPro: IPR013702 - InterPro: IPR002831 - InterPro: IPR011991 [H]
Pfam domain/function: PF08495 FIST; PF10442 FIST_C; PF01978 TrmB [H]
EC number: NA
Molecular weight: Translated: 40201; Mature: 40070
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHAATGASQIEHSYDAGFAAAQQACTQLAPHSPTCLIAFTTDAYDQAAVVQGIRAASQ CCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHC QAPLIGCCAGGIISNAGTFTHGVVLLALASDDLKLDLSLVAGVKADPGKVADQLADQLEA CCCEEEEECCCHHCCCCCHHHHEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHH VLDNPTSQQAALILVDGLAGTLTDFVQHATAAFGPLCPLVGGGAGDSFQFKQTYQFVNDQ HHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHH VISDGAAVGLLQSPTPMGIGVQHGWEPAARGLVVTRSEGTIIYELDGRPAFAVYQELFPD HHCCCCEEEEECCCCCCCCCCCCCCCHHHCCEEEEECCCEEEEEECCCCHHHHHHHHCCC LTVENFGRFVIDHPIGLPQINGEFLIRDPLRTHPDGSIECIASVPKNVVAHIMHGSHETL CCHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH FNAAQLATKRALAALNGPPAALIIFDCVSRLAMLGDAAATEVQRIREVAGLDVPVVGMFS HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEC FGEIAAAETGGALFHNKTVVVYAIGQA CCCCHHCCCCCEEEECCEEEEEEECCC >Mature Secondary Structure TTHAATGASQIEHSYDAGFAAAQQACTQLAPHSPTCLIAFTTDAYDQAAVVQGIRAASQ CCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHC QAPLIGCCAGGIISNAGTFTHGVVLLALASDDLKLDLSLVAGVKADPGKVADQLADQLEA CCCEEEEECCCHHCCCCCHHHHEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHH VLDNPTSQQAALILVDGLAGTLTDFVQHATAAFGPLCPLVGGGAGDSFQFKQTYQFVNDQ HHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHH VISDGAAVGLLQSPTPMGIGVQHGWEPAARGLVVTRSEGTIIYELDGRPAFAVYQELFPD HHCCCCEEEEECCCCCCCCCCCCCCCHHHCCEEEEECCCEEEEEECCCCHHHHHHHHCCC LTVENFGRFVIDHPIGLPQINGEFLIRDPLRTHPDGSIECIASVPKNVVAHIMHGSHETL CCHHHCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH FNAAQLATKRALAALNGPPAALIIFDCVSRLAMLGDAAATEVQRIREVAGLDVPVVGMFS HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEC FGEIAAAETGGALFHNKTVVVYAIGQA CCCCHHCCCCCEEEECCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]