| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159897109
Identifier: 159897109
GI number: 159897109
Start: 668182
End: 668943
Strand: Reverse
Name: 159897109
Synonym: Haur_0580
Alternate gene names: NA
Gene position: 668943-668182 (Counterclockwise)
Preceding gene: 159897110
Following gene: 159897108
Centisome position: 10.54
GC content: 53.15
Gene sequence:
>762_bases ATGCAACGTTTTCTTGGTTTTATGCTGATCGGTTTGCTATTGCTGGCTTGTGGTCAAACGACTGGGCAACAAATCGAATC GGCGGCAAGTGTGGCCCAAGTAGCCCAAGCCGAGCCAACCGATGAGCCAACGGCCAAACCGACGCGCACGCCACGGCCAA CTAACACACCTCGTCCAACCGCTAAGCCCAAGCCAACTCGCACGCCACGGCCAACCGCGACGGCCACGCCAATTCCTGAG CCAGTTGTGCTGAGCGGCGTTGGCCAAACTGTGACTGATGCATTTATGCCACCCAGCGCAGTTAGCATTATTAAATTGAC CCATACTGGGCGACGCAACTTTATCGTCAAAGCCTATAACGCTGAGGGCGATGAAAGCTATTTGGTCAACGAAATTGGGC GTTATGCTGGTTCGCGAGTGTTGTATGGCGATAGCAGCAGCTTTTTGGAGATTGATGCCGATGGCGAGTGGACAGCCGAA ATTGTGCCAATTGGCTTGGAAGCTACCGCCGCCGATGGCCTGAGCGGCACTGGTGATCTGGTCAGCGGCCTATTTATGCC CAACCAAGAAGGGCCAATTCCATTCAATTTCACCCACAATGGCGATAGCAATTTTATCGTGCAAGTCACTTGCCAAGGCG GTATGGATTACGCCCAAAACGAGATTGGCACAGTTGATGGCTCTGCGATTGTCAAATTCTCTGAAGGCCCATGCTTGTGG GATGTGCAGGCCGATGGCGATTGGACAATTAGCCCCAAGTAA
Upstream 100 bases:
>100_bases TAATCAATTTGTCTATCGTAACGATTAAATCCACATTTGTGCCCTAGGGTGTTGCTAAAGTAACTCCAACAATCAGTTGA AGTATTGAAGGAGTTCATCG
Downstream 100 bases:
>100_bases ACCAACAGCCCGCAGATCATGGTTTGATTTGCGGGCTAAGCTTTAATTTTGTTTAATCAAGCACGAAGGAATATATTCAG CTCGATCATTGATAAATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MQRFLGFMLIGLLLLACGQTTGQQIESAASVAQVAQAEPTDEPTAKPTRTPRPTNTPRPTAKPKPTRTPRPTATATPIPE PVVLSGVGQTVTDAFMPPSAVSIIKLTHTGRRNFIVKAYNAEGDESYLVNEIGRYAGSRVLYGDSSSFLEIDADGEWTAE IVPIGLEATAADGLSGTGDLVSGLFMPNQEGPIPFNFTHNGDSNFIVQVTCQGGMDYAQNEIGTVDGSAIVKFSEGPCLW DVQADGDWTISPK
Sequences:
>Translated_253_residues MQRFLGFMLIGLLLLACGQTTGQQIESAASVAQVAQAEPTDEPTAKPTRTPRPTNTPRPTAKPKPTRTPRPTATATPIPE PVVLSGVGQTVTDAFMPPSAVSIIKLTHTGRRNFIVKAYNAEGDESYLVNEIGRYAGSRVLYGDSSSFLEIDADGEWTAE IVPIGLEATAADGLSGTGDLVSGLFMPNQEGPIPFNFTHNGDSNFIVQVTCQGGMDYAQNEIGTVDGSAIVKFSEGPCLW DVQADGDWTISPK >Mature_253_residues MQRFLGFMLIGLLLLACGQTTGQQIESAASVAQVAQAEPTDEPTAKPTRTPRPTNTPRPTAKPKPTRTPRPTATATPIPE PVVLSGVGQTVTDAFMPPSAVSIIKLTHTGRRNFIVKAYNAEGDESYLVNEIGRYAGSRVLYGDSSSFLEIDADGEWTAE IVPIGLEATAADGLSGTGDLVSGLFMPNQEGPIPFNFTHNGDSNFIVQVTCQGGMDYAQNEIGTVDGSAIVKFSEGPCLW DVQADGDWTISPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26858; Mature: 26858
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRFLGFMLIGLLLLACGQTTGQQIESAASVAQVAQAEPTDEPTAKPTRTPRPTNTPRPT CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC AKPKPTRTPRPTATATPIPEPVVLSGVGQTVTDAFMPPSAVSIIKLTHTGRRNFIVKAYN CCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEC AEGDESYLVNEIGRYAGSRVLYGDSSSFLEIDADGEWTAEIVPIGLEATAADGLSGTGDL CCCCHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCEEEEEEEECCEEECCCCCCCCHHH VSGLFMPNQEGPIPFNFTHNGDSNFIVQVTCQGGMDYAQNEIGTVDGSAIVKFSEGPCLW HHHEECCCCCCCCCEEEECCCCCCEEEEEEECCCCCHHHCCCCCCCCCEEEEECCCCEEE DVQADGDWTISPK EEECCCCEEECCC >Mature Secondary Structure MQRFLGFMLIGLLLLACGQTTGQQIESAASVAQVAQAEPTDEPTAKPTRTPRPTNTPRPT CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC AKPKPTRTPRPTATATPIPEPVVLSGVGQTVTDAFMPPSAVSIIKLTHTGRRNFIVKAYN CCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEC AEGDESYLVNEIGRYAGSRVLYGDSSSFLEIDADGEWTAEIVPIGLEATAADGLSGTGDL CCCCHHHHHHHHHHHHCCEEEEECCCCEEEEECCCCEEEEEEEECCEEECCCCCCCCHHH VSGLFMPNQEGPIPFNFTHNGDSNFIVQVTCQGGMDYAQNEIGTVDGSAIVKFSEGPCLW HHHEECCCCCCCCCEEEECCCCCCEEEEEEECCCCCHHHCCCCCCCCCEEEEECCCCEEE DVQADGDWTISPK EEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA