Click here to switch to the map view.

The map label for this gene is 159897108

Identifier: 159897108

GI number: 159897108

Start: 665931

End: 667817

Strand: Reverse

Name: 159897108

Synonym: Haur_0579

Alternate gene names: NA

Gene position: 667817-665931 (Counterclockwise)

Preceding gene: 159897109

Following gene: 159897107

Centisome position: 10.52

GC content: 43.51

Gene sequence:

>1887_bases
ATGAATCGATCGCTGTTGTTGATCGCCCTAGGGCCAGTTCAGGAATTTATCGAGCAGGCTCGGCGCACCCGCGATGTCTG
GTTTGGTTCGTGGGTGCTCAGTCATCTTGCCAAAAAGGTCGCCCAAACCCTGCCACGCGAAGGCTTGATCTTTCCAACTG
GCGATAGTTTGCCCTCGCCCGAAGCCGAAAATAGCGATCCAAGTACTGAACGAATCAGCTATAGTAACCAAATTTTGGTG
ATCGTGCCCGATGCCCAAGCAGCCATTACCCACGCAAAGGCAGCCTTTGATCAAGAAATTGACCAATTCGTAAACATTCT
GCTGAAAACTAAACAGATCAATTGGCTCGAAGGCCTGTCGGAAGAGCAGCGTGAACAGCAGCTTATTAAACAATTAAAAG
ATTTATTTGAGTTTCAGTATGTATATGTTGATTTACCGGATGACCAGCACTATGCGCAACAACGCAAAAAGCTTTACCAG
CTCTATGCAGCACGTAAAAATACCCGCAACTTTGGCTTAATTGATTGGCAACAAGACCCCCAAAATATGAAGCGCTCGGA
TAAATCGTCGCTCGATGGCTGGCACACGCTAATAGCCAATGGAGCAAAATCGGGCGAAAATCTCTCAGCCGTCGATTTAC
TCAAGCGTATGCTCAAACCACAAGATTTAGACCAAGCCTATCCAAAAGGTTTAGACGGATTCCCAAGTACTTCGCATATG
GCTGCGCTGGCATTTGCTGAACATGTTAATCAAAGCACTTTAGCTCGCCAAGGTTGGGAACGCTATATCAATAATCTACG
TAGCACAGGCTATCGCATCACTGAATATTTACCACGAGTTCAGCGCTTTGATCGAATTGCCCTCTTTCCAAGCGAAAATA
CTAACCGCGATTTTTTTGATGGTTCATTGGTTTTTGAGTCGCGCTTAGGGGAAGATTTCGCCAATACTGATTTGAATACT
GTAATTATTAAGCAAGCACGCGGCTATTTGGAAGATTTTATAACTGCTTATGCCAAACAACGCCCAAATCCCTATTATGC
GATTATTGCTGCCGATGGCGATAAAATGGGCAATTTAATTGATTCGATTAGCGATGTACAAATTCATCGCGATTTATCCA
AGGTTGTTACAACATTTGCTAAAGATGCAGCTCAAATTCTAGAAAATGATTACCAAGCAGCAGTCATTTATGCTGGTGGC
GATGATGTACTAGCGCTTCTTCCATTACATACACTTTTAGCAGCTACCAAAAAAATCAGCGATCTCTTTATCGAATATAT
GCAACCACTAGCCGAGCAACAGGCTGTTAGCACACCAACACTCTCGGTTGGGGTGGCAATTGTGCATCATCTTGAAGCCT
TGCAGGATTCAATTCAATTGGCGCGGAAGGCCGAGAAGCTAGCCAAAAAGCCGCGTAATGCCTTAGCAATTATTTTGAGC
AAACGTAATGGCTCCGATAAAACCATTGTTGGTCAGTGGGATACAGAATTTTATCAACACTTAACCAAATTAGTTGAGCT
GCATTGCCAACAAACAATTCCTGATGGCTTTATTTTTGAGCTTGATGAGCTACTCAAGCGCTTTGACTTTGGGCTTATCA
ATGATCGAACAGAACTTCAACAAACGCTCAAGATTATTGAACATGAAACGCTGCGAATTTTGAAGCGCAAACAAATTCAG
TCTGCAGGCGAAGCTACATTTTTGGCTGCTGATGTGATTAATCTGCTCCAAAACATTATTGGCTATTGTTCGAGTCATTC
ATCAAACTCAGATCAAGCAGACCAATATCTGCGCGATTTTATCGCCATGAATTTAGTGGCACGGGAGTTAGCCAATGTTC
AGGCCTTATTTGAAAAGACTCAGCCCCAAGGAGTACCTCAATTATGA

Upstream 100 bases:

>100_bases
TACAAGCACCTCGAACTAAACCAAAAACCACTCTTGCCTAACATGGAGTTGCATTGTTATAATAGCGCAGAGTTCCCCGT
TTACCTAGAGGAGTGTTGCA

Downstream 100 bases:

>100_bases
CACTTGATCTCTGGCTAATTCAGCCATTCAACTCCTTGGTAATTGCCGATGGTCGCCCATTTGAAAACCAGCCAGGTGCC
CGCGCCAAAAGCCTCAGTTT

Product: CRISPR-associated RAMP Crm2 family protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Crm2 Family Protein; CRISPR-Associated Cmr2 Family Protein; Crm2 Family CRISPR-Associated Protein; Hydrolase; Crispr-Associated Protein Crm2 Family; Cmr2 Family CRISPR-Associated Protein; DNA-Dependent DNA Polymerase

Number of amino acids: Translated: 628; Mature: 628

Protein sequence:

>628_residues
MNRSLLLIALGPVQEFIEQARRTRDVWFGSWVLSHLAKKVAQTLPREGLIFPTGDSLPSPEAENSDPSTERISYSNQILV
IVPDAQAAITHAKAAFDQEIDQFVNILLKTKQINWLEGLSEEQREQQLIKQLKDLFEFQYVYVDLPDDQHYAQQRKKLYQ
LYAARKNTRNFGLIDWQQDPQNMKRSDKSSLDGWHTLIANGAKSGENLSAVDLLKRMLKPQDLDQAYPKGLDGFPSTSHM
AALAFAEHVNQSTLARQGWERYINNLRSTGYRITEYLPRVQRFDRIALFPSENTNRDFFDGSLVFESRLGEDFANTDLNT
VIIKQARGYLEDFITAYAKQRPNPYYAIIAADGDKMGNLIDSISDVQIHRDLSKVVTTFAKDAAQILENDYQAAVIYAGG
DDVLALLPLHTLLAATKKISDLFIEYMQPLAEQQAVSTPTLSVGVAIVHHLEALQDSIQLARKAEKLAKKPRNALAIILS
KRNGSDKTIVGQWDTEFYQHLTKLVELHCQQTIPDGFIFELDELLKRFDFGLINDRTELQQTLKIIEHETLRILKRKQIQ
SAGEATFLAADVINLLQNIIGYCSSHSSNSDQADQYLRDFIAMNLVARELANVQALFEKTQPQGVPQL

Sequences:

>Translated_628_residues
MNRSLLLIALGPVQEFIEQARRTRDVWFGSWVLSHLAKKVAQTLPREGLIFPTGDSLPSPEAENSDPSTERISYSNQILV
IVPDAQAAITHAKAAFDQEIDQFVNILLKTKQINWLEGLSEEQREQQLIKQLKDLFEFQYVYVDLPDDQHYAQQRKKLYQ
LYAARKNTRNFGLIDWQQDPQNMKRSDKSSLDGWHTLIANGAKSGENLSAVDLLKRMLKPQDLDQAYPKGLDGFPSTSHM
AALAFAEHVNQSTLARQGWERYINNLRSTGYRITEYLPRVQRFDRIALFPSENTNRDFFDGSLVFESRLGEDFANTDLNT
VIIKQARGYLEDFITAYAKQRPNPYYAIIAADGDKMGNLIDSISDVQIHRDLSKVVTTFAKDAAQILENDYQAAVIYAGG
DDVLALLPLHTLLAATKKISDLFIEYMQPLAEQQAVSTPTLSVGVAIVHHLEALQDSIQLARKAEKLAKKPRNALAIILS
KRNGSDKTIVGQWDTEFYQHLTKLVELHCQQTIPDGFIFELDELLKRFDFGLINDRTELQQTLKIIEHETLRILKRKQIQ
SAGEATFLAADVINLLQNIIGYCSSHSSNSDQADQYLRDFIAMNLVARELANVQALFEKTQPQGVPQL
>Mature_628_residues
MNRSLLLIALGPVQEFIEQARRTRDVWFGSWVLSHLAKKVAQTLPREGLIFPTGDSLPSPEAENSDPSTERISYSNQILV
IVPDAQAAITHAKAAFDQEIDQFVNILLKTKQINWLEGLSEEQREQQLIKQLKDLFEFQYVYVDLPDDQHYAQQRKKLYQ
LYAARKNTRNFGLIDWQQDPQNMKRSDKSSLDGWHTLIANGAKSGENLSAVDLLKRMLKPQDLDQAYPKGLDGFPSTSHM
AALAFAEHVNQSTLARQGWERYINNLRSTGYRITEYLPRVQRFDRIALFPSENTNRDFFDGSLVFESRLGEDFANTDLNT
VIIKQARGYLEDFITAYAKQRPNPYYAIIAADGDKMGNLIDSISDVQIHRDLSKVVTTFAKDAAQILENDYQAAVIYAGG
DDVLALLPLHTLLAATKKISDLFIEYMQPLAEQQAVSTPTLSVGVAIVHHLEALQDSIQLARKAEKLAKKPRNALAIILS
KRNGSDKTIVGQWDTEFYQHLTKLVELHCQQTIPDGFIFELDELLKRFDFGLINDRTELQQTLKIIEHETLRILKRKQIQ
SAGEATFLAADVINLLQNIIGYCSSHSSNSDQADQYLRDFIAMNLVARELANVQALFEKTQPQGVPQL

Specific function: Unknown

COG id: COG1353

COG function: function code R; Predicted hydrolase of the HD superfamily (permuted catalytic motifs)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71195; Mature: 71195

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSLLLIALGPVQEFIEQARRTRDVWFGSWVLSHLAKKVAQTLPREGLIFPTGDSLPSP
CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
EAENSDPSTERISYSNQILVIVPDAQAAITHAKAAFDQEIDQFVNILLKTKQINWLEGLS
CCCCCCCCHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
EEQREQQLIKQLKDLFEFQYVYVDLPDDQHYAQQRKKLYQLYAARKNTRNFGLIDWQQDP
HHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCH
QNMKRSDKSSLDGWHTLIANGAKSGENLSAVDLLKRMLKPQDLDQAYPKGLDGFPSTSHM
HHHHHCCHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHH
AALAFAEHVNQSTLARQGWERYINNLRSTGYRITEYLPRVQRFDRIALFPSENTNRDFFD
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCC
GSLVFESRLGEDFANTDLNTVIIKQARGYLEDFITAYAKQRPNPYYAIIAADGDKMGNLI
CHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHH
DSISDVQIHRDLSKVVTTFAKDAAQILENDYQAAVIYAGGDDVLALLPLHTLLAATKKIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
DLFIEYMQPLAEQQAVSTPTLSVGVAIVHHLEALQDSIQLARKAEKLAKKPRNALAIILS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
KRNGSDKTIVGQWDTEFYQHLTKLVELHCQQTIPDGFIFELDELLKRFDFGLINDRTELQ
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHH
QTLKIIEHETLRILKRKQIQSAGEATFLAADVINLLQNIIGYCSSHSSNSDQADQYLRDF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
IAMNLVARELANVQALFEKTQPQGVPQL
HHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNRSLLLIALGPVQEFIEQARRTRDVWFGSWVLSHLAKKVAQTLPREGLIFPTGDSLPSP
CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
EAENSDPSTERISYSNQILVIVPDAQAAITHAKAAFDQEIDQFVNILLKTKQINWLEGLS
CCCCCCCCHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
EEQREQQLIKQLKDLFEFQYVYVDLPDDQHYAQQRKKLYQLYAARKNTRNFGLIDWQQDP
HHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCH
QNMKRSDKSSLDGWHTLIANGAKSGENLSAVDLLKRMLKPQDLDQAYPKGLDGFPSTSHM
HHHHHCCHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHH
AALAFAEHVNQSTLARQGWERYINNLRSTGYRITEYLPRVQRFDRIALFPSENTNRDFFD
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCC
GSLVFESRLGEDFANTDLNTVIIKQARGYLEDFITAYAKQRPNPYYAIIAADGDKMGNLI
CHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHH
DSISDVQIHRDLSKVVTTFAKDAAQILENDYQAAVIYAGGDDVLALLPLHTLLAATKKIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
DLFIEYMQPLAEQQAVSTPTLSVGVAIVHHLEALQDSIQLARKAEKLAKKPRNALAIILS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
KRNGSDKTIVGQWDTEFYQHLTKLVELHCQQTIPDGFIFELDELLKRFDFGLINDRTELQ
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHH
QTLKIIEHETLRILKRKQIQSAGEATFLAADVINLLQNIIGYCSSHSSNSDQADQYLRDF
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
IAMNLVARELANVQALFEKTQPQGVPQL
HHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA